LOCUS       NM_001013412             282 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus C-C motif chemokine ligand 26 (Ccl26), mRNA.
ACCESSION   NM_001013412
VERSION     NM_001013412.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 282)
  AUTHORS   Sundberg,J.P., Dadras,S.S., Silva,K.A., Kennedy,V.E., Garland,G.,
            Murray,S.A., Sundberg,B.A., Schofield,P.N. and Pratt,C.H.
  TITLE     Systematic screening for skin, hair, and nail abnormalities in a
            large-scale knockout mouse program
  JOURNAL   PLoS One 12 (7), e0180682 (2017)
   PUBMED   28700664
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 282)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. PMID: 29144450]
REFERENCE   4  (bases 1 to 282)
  AUTHORS   Wang,J., Zhang,T., Ma,C. and Wang,S.
  TITLE     Puerarin attenuates airway inflammation by regulation of eotaxin-3
  JOURNAL   Immunol Lett 163 (2), 173-178 (2015)
   PUBMED   25530546
  REMARK    GeneRIF: Data indicate that puerarin attenuates airway inflammation
            via eotaxin-3.
REFERENCE   5  (bases 1 to 282)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   6  (bases 1 to 282)
  AUTHORS   Duchesnes,C.E., Murphy,P.M., Williams,T.J. and Pease,J.E.
  TITLE     Alanine scanning mutagenesis of the chemokine receptor CCR3 reveals
            distinct extracellular residues involved in recognition of the
            eotaxin family of chemokines
  JOURNAL   Mol Immunol 43 (8), 1221-1231 (2006)
   PUBMED   16102831
  REMARK    GeneRIF: Distinct acidic and basic residues within CCR3 determine
            both receptor expression and activation by the eotaxins.
REFERENCE   7  (bases 1 to 282)
  AUTHORS   Pope,S.M., Fulkerson,P.C., Blanchard,C., Akei,H.S.,
            Nikolaidis,N.M., Zimmermann,N., Molkentin,J.D. and Rothenberg,M.E.
  TITLE     Identification of a cooperative mechanism involving interleukin-13
            and eotaxin-2 in experimental allergic lung inflammation
  JOURNAL   J Biol Chem 280 (14), 13952-13961 (2005)
   PUBMED   15647285
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC083858.3.
            
            On Aug 29, 2006 this sequence version replaced NM_001013412.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY587128.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-70                AC083858.3         19283-19352         c
            71-185              AC083858.3         19080-19194         c
            186-282             AC083858.3         16231-16327         c
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 75.27 cM"
     gene            1..282
                     /gene="Ccl26"
                     /gene_synonym="Ccl26l"
                     /note="C-C motif chemokine ligand 26"
                     /db_xref="GeneID:541307"
                     /db_xref="MGI:MGI:3589281"
     CDS             1..282
                     /gene="Ccl26"
                     /gene_synonym="Ccl26l"
                     /note="eotaxin-3; chemokine (C-C motif) ligand 26"
                     /codon_start=1
                     /product="C-C motif chemokine 26 precursor"
                     /protein_id="NP_001013430.2"
                     /db_xref="CCDS:CCDS19741.1"
                     /db_xref="GeneID:541307"
                     /db_xref="MGI:MGI:3589281"
                     /translation="MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWS
                     WVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL"
     exon            1..70
                     /gene="Ccl26"
                     /gene_synonym="Ccl26l"
                     /inference="alignment:Splign:2.1.0"
     exon            71..185
                     /gene="Ccl26"
                     /gene_synonym="Ccl26l"
                     /inference="alignment:Splign:2.1.0"
     exon            186..282
                     /gene="Ccl26"
                     /gene_synonym="Ccl26l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgttcttcg atttgggtct ccttgttctc ctggccatct tcctcagtgt ccagcttggt
       61 gttgccacat gtgggagcag catcgctatg tcctgctgcc ctaatttcag ctactatgtg
      121 atcccatgga gctgggtgta cagctataag ttcaccgaca agagctgcac cagtgacggt
      181 gtgatattct ttacaaaaac aggtaagcaa ttctgtgtcc agccaggggc caaatgggtg
      241 cagagattca tctctctggt gaacaccagg aaccatttgt ga
//
