LOCUS       NM_001193666             867 bp    mRNA    linear   ROD 06-FEB-2024
DEFINITION  Mus musculus C-C motif chemokine ligand 21F (Ccl21f), mRNA.
ACCESSION   NM_001193666 XM_001478610 XM_003085545
VERSION     NM_001193666.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL824709.35.
            
            On or before Jan 14, 2011 this sequence version replaced
            XM_003085545.1, XM_001478610.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments from paralogous mouse
            loci.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CA459653.1, SRR7345562.586053.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-139               AL824709.35        86195-86333
            140-260             AL824709.35        86422-86542
            261-443             AL824709.35        86637-86819
            444-867             AL824709.35        86902-87325
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 22.26 cM"
     gene            1..867
                     /gene="Ccl21f"
                     /gene_synonym="6Ckine; Ccl21b; Ccl21c; Gm13304; Scya21;
                     Scya21b; Scya21c; TCA4"
                     /note="C-C motif chemokine ligand 21F"
                     /db_xref="GeneID:100504346"
                     /db_xref="MGI:MGI:3710514"
     exon            1..139
                     /gene="Ccl21f"
                     /gene_synonym="6Ckine; Ccl21b; Ccl21c; Gm13304; Scya21;
                     Scya21b; Scya21c; TCA4"
                     /inference="alignment:Splign:2.1.0"
     CDS             73..474
                     /gene="Ccl21f"
                     /gene_synonym="6Ckine; Ccl21b; Ccl21c; Gm13304; Scya21;
                     Scya21b; Scya21c; TCA4"
                     /note="C-C motif chemokine 21b; C-C motif chemokine 21c;
                     Small-inducible cytokine A21c; Beta-chemokine exodus-2;
                     Small-inducible cytokine A21b; Thymus-derived chemotactic
                     agent 4"
                     /codon_start=1
                     /product="C-C motif chemokine 21b precursor"
                     /protein_id="NP_001180595.1"
                     /db_xref="CCDS:CCDS51148.1"
                     /db_xref="GeneID:100504346"
                     /db_xref="MGI:MGI:3710514"
                     /translation="MAQMMTLSLLSLVLALCIPWTQGSDGGGQDCCLKYSQKKIPYSI
                     VRGYRKQEPSLGCPIPAILFLPRKHSKPELCANPEEGWVQNLMRRLDQPPAPGKQSPG
                     CRKNRGTSKSGKKGKGSKGCKRTEQTQPSRG"
     exon            140..260
                     /gene="Ccl21f"
                     /gene_synonym="6Ckine; Ccl21b; Ccl21c; Gm13304; Scya21;
                     Scya21b; Scya21c; TCA4"
                     /inference="alignment:Splign:2.1.0"
     exon            261..443
                     /gene="Ccl21f"
                     /gene_synonym="6Ckine; Ccl21b; Ccl21c; Gm13304; Scya21;
                     Scya21b; Scya21c; TCA4"
                     /inference="alignment:Splign:2.1.0"
     exon            444..867
                     /gene="Ccl21f"
                     /gene_synonym="6Ckine; Ccl21b; Ccl21c; Gm13304; Scya21;
                     Scya21b; Scya21c; TCA4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acacacagac cccaacttgc agctgtccat ctcacctaca gctctggtct catcctcaac
       61 tcaaccacaa tcatggctca gatgatgact ctgagcctcc ttagcctggt cctggctctc
      121 tgcatcccct ggacccaagg cagtgatgga gggggacagg actgctgcct taagtacagc
      181 cagaagaaaa ttccctacag tattgtccga ggctatagga agcaagaacc aagtttaggc
      241 tgtcccatcc cggcaatcct gttcttaccc cggaagcact ctaagcctga gctatgtgca
      301 aaccctgagg aaggctgggt gcagaacctg atgcgccgcc tggaccagcc tccagcccca
      361 gggaaacaaa gccccggctg caggaagaac cggggaacct ctaagtctgg aaagaaagga
      421 aagggctcca agggctgcaa gagaactgaa cagacacagc cctcaagagg atagcccagt
      481 agcccgcctg gagcccagga gatcccccac gaacttcaag ctgggtggtt cacggtccaa
      541 ctcacaggca aagagggagc tagaaaacag actcaggagc ccaaagcagc cacctcatgc
      601 tggcctccgt ccacaccctt gccctgcttc aaccattaca tctgcacggc catccctttc
      661 ttacctggcg gagctgcctt ccctggggta gacctagaga gtcagaagaa agagtgtctc
      721 ccagggaatg aggaaggaga cagcaggact gtcccctcta ggaggtcact caggtcccaa
      781 gacctgaacc tgctctccat ggcgccctcc ccttgtcctt gcacctatga tttataccta
      841 actgaataaa aaagtgatcc agcctca
//
