LOCUS       NM_001002787            2030 bp    mRNA    linear   ROD 21-AUG-2024
DEFINITION  Mus musculus calicin (Ccin), mRNA.
ACCESSION   NM_001002787 XM_485375
VERSION     NM_001002787.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Fan,Y., Huang,C., Chen,J., Chen,Y., Wang,Y., Yan,Z., Yu,W., Wu,H.,
            Yang,Y., Nie,L., Huang,S., Wang,F., Wang,H., Hua,Y., Lyu,Q.,
            Kuang,Y. and Lei,M.
  TITLE     Mutations in CCIN cause teratozoospermia and male infertility
  JOURNAL   Sci Bull (Beijing) 67 (20), 2112-2123 (2022)
   PUBMED   36546111
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Zhang,X.Z., Wei,L.L., Jin,H.J., Zhang,X.H. and Chen,S.R.
  TITLE     The perinuclear theca protein Calicin helps shape the sperm head
            and maintain the nuclear structure in mice
  JOURNAL   Cell Rep 40 (1), 111049 (2022)
   PUBMED   35793634
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK030197.1.
            
            On Apr 5, 2007 this sequence version replaced NM_001002787.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK030197.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2030              AK030197.1         4-2033
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 23.08 cM"
     gene            1..2030
                     /gene="Ccin"
                     /gene_synonym="4933417A14Rik"
                     /note="calicin"
                     /db_xref="GeneID:442829"
                     /db_xref="MGI:MGI:3045316"
     exon            1..2030
                     /gene="Ccin"
                     /gene_synonym="4933417A14Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..1858
                     /gene="Ccin"
                     /gene_synonym="4933417A14Rik"
                     /codon_start=1
                     /product="calicin"
                     /protein_id="NP_001002787.1"
                     /db_xref="CCDS:CCDS18118.1"
                     /db_xref="GeneID:442829"
                     /db_xref="MGI:MGI:3045316"
                     /translation="MKLEFTEKNYNSFVLQNLNKQRKRKEYWDMALTVDHHVFFAHRN
                     VLAAVSPLVKSLISSNDMKTTDELYITIDPNYLSPATVDQLLDYFYSGKVVISEQNVE
                     ELLRGAQYFNTPRLRIHCNDFLIKSIRRVNCLRYLFLAELFELKEVSDLAYSGIRDNF
                     HFWASPEGSMHFMRCPPVIFGRLLRDENLHVLNEDQALSALISWVYFRKEEREKYFKK
                     FFNYINLNAVSNKTLMFASNKLVGLENNSAHATLIESVLMDRKQERPCSLLSYQRKGA
                     LLDSVVILGGQKAHGKFNDGVFAYIIQENLWLKLSEMPYRAAALSATAAGRYIYISGG
                     TTEQISGLKTAWRYDMDDNSWTKLPDLPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSN
                     IYRYDERKEAWCLAGKMSIPMDGTAVITKGDRNLYIVTGRCLVKGYISRVGVVDCFDT
                     CTGEVVQCITFPIEFNHRPLLSFHQDNILRVHSHRQSVEINLQKIKANKSTTSVPLLP
                     NSCPLDVSHAICSIGDSKVFVCGGVTTASDVQTKDYTINPNAYLLDQKIGEWQTLACP
                     PEALDCPACCLAKLPCKILQRI"
     polyA_site      1876
                     /gene="Ccin"
                     /gene_synonym="4933417A14Rik"
                     /note="major polyA site"
     regulatory      1882..1887
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ccin"
                     /gene_synonym="4933417A14Rik"
                     /note="hexamer: AGTAAA"
     polyA_site      1918
                     /gene="Ccin"
                     /gene_synonym="4933417A14Rik"
                     /note="major polyA site"
     polyA_site      1930
                     /gene="Ccin"
                     /gene_synonym="4933417A14Rik"
ORIGIN      
        1 aaacaaccat cagtacaaac cccaaaggcc tggaaaagtc tgccctccgg tacctgctac
       61 gaatcttctg tctcggccaa caagaagcac catgaaactg gaattcacag agaaaaacta
      121 caacagcttt gtgctgcaaa acctgaacaa acagaggaag cgtaaagagt actgggacat
      181 ggccctgact gtggaccatc atgtcttctt cgcacatcgc aacgtgctgg ctgccgtctc
      241 tccactagtg aaaagcctca tctccagcaa cgacatgaag accaccgatg aactctacat
      301 caccatcgac cccaactacc tgagcccagc cacggtggac cagctcctgg attacttcta
      361 cagcggcaaa gtggtgatct cagagcagaa cgtggaggag ctgctccggg gcgcacagta
      421 tttcaatacc ccacgccttc ggattcactg caatgacttc cttattaagt ctattcgccg
      481 cgtcaactgc ttgcgctacc tcttcttggc tgagctgttc gagctcaaag aagtatcaga
      541 cttggcctac tctggcattc gtgacaactt ccacttctgg gccagtcccg agggctctat
      601 gcacttcatg cgctgcccac ccgtcatctt cggtcgcctg ctccgggatg aaaacctcca
      661 cgtgctcaac gaggaccagg cgctcagcgc actcatcagt tgggtgtact tccggaagga
      721 ggagcgggaa aaatacttca agaagttctt caattacatc aatctcaatg cggtctccaa
      781 caagacgctg atgtttgcca gcaacaagct ggttggcttg gagaacaact ctgcccacgc
      841 gaccttgatc gaaagtgtcc tgatggaccg caagcaggag cgcccgtgca gcctgctgag
      901 ctaccagcgg aaaggggccc tgcttgactc ggtggtcatc ctgggtggcc agaaggccca
      961 cggtaagttc aacgatgggg tgtttgccta tatcatccag gagaacctgt ggctgaagct
     1021 ctcagagatg ccataccggg cagccgcgct cagtgccact gctgctggcc gttacatcta
     1081 catatccggt ggcaccactg agcagatttc aggactgaag acagcgtggc ggtatgacat
     1141 ggacgacaac tcctggacca agctacctga cctgcccatt gggcttgtct tccacaccat
     1201 ggtgacctgc gggggaacag tttactcagt gggtgggagc attgccccac gccggtacgt
     1261 ctctaacatt tatcgctatg atgaacgcaa ggaagcctgg tgcttggcgg ggaagatgag
     1321 catccctatg gacgggacag cagtcatcac taagggtgac cggaacctgt acattgtcac
     1381 tgggcgatgc ctggtgaagg gctacatctc ccgggtcggt gtagtggact gctttgacac
     1441 ctgcacgggg gaagtggtcc agtgtatcac cttccccatc gaattcaacc accggcccct
     1501 gctctcgttc catcaggaca acatccttcg tgtacacagc caccggcaga gcgtggaaat
     1561 caacttacag aagatcaagg ccaacaagtc gacaacctca gtacctctgt tgcccaacag
     1621 ttgtcccttg gatgtatccc atgctatctg ctccattgga gacagcaagg tatttgtatg
     1681 tgggggtgtc accacagcca gcgatgtcca gaccaaggac tacaccatca atcctaatgc
     1741 ttacttgctg gaccaaaaga taggtgaatg gcagaccctt gcctgcccac ctgaggcact
     1801 ggactgtcct gcctgctgtc tagccaagct gccttgcaag attcttcaaa gaatttaaac
     1861 aactttttaa gtgggagaat aagtaaatgc attattattc acaatttaat gacagaaagc
     1921 aagggaggaa tgtgactttg gattcctttt agtggggggt caatgcttgg ggctacacat
     1981 gttcctgatg gataggattc agggttaata tctcaatgga ggtaactagc
//
