LOCUS       NM_001162979            2691 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus coiled-coil domain containing 81 (Ccdc81), mRNA.
ACCESSION   NM_001162979 XM_885490 XM_911668
VERSION     NM_001162979.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Stauber,M., Weidemann,M., Dittrich-Breiholz,O., Lobschat,K.,
            Alten,L., Mai,M., Beckers,A., Kracht,M. and Gossler,A.
  TITLE     Identification of FOXJ1 effectors during ciliogenesis in the foetal
            respiratory epithelium and embryonic left-right organiser of the
            mouse
  JOURNAL   Dev Biol 423 (2), 170-188 (2017)
   PUBMED   27914912
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Fernandez-Valdivia,R., Zhang,Y., Pai,S., Metzker,M.L. and
            Schumacher,A.
  TITLE     l7Rn6 encodes a novel protein required for clara cell function in
            mouse lung development
  JOURNAL   Genetics 172 (1), 389-399 (2006)
   PUBMED   16157679
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC165077.3, AK014876.1 and AV255663.2.
            
            On or before Jul 8, 2009 this sequence version replaced
            XM_911668.3, XM_885490.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.62499.1, AK014876.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849377 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-18                AC165077.3         160650-160667       c
            19-2443             AK014876.1         2-2426
            2444-2691           AV255663.2         744-991
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 50.38 cM"
     gene            1..2691
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /note="coiled-coil domain containing 81"
                     /db_xref="GeneID:70884"
                     /db_xref="MGI:MGI:1918134"
     exon            1..448
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             370..2334
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 81"
                     /protein_id="NP_001156451.1"
                     /db_xref="CCDS:CCDS52306.1"
                     /db_xref="GeneID:70884"
                     /db_xref="MGI:MGI:1918134"
                     /translation="MLDRVGPGFQDLCRQVLPTLPTLSQEEVSTIWANVSDFVERQLT
                     MHKGVQISGLGTFTFSRQQLEVGNKKFVLVQRPVFIMAEKLVQTHGLKQNKVFSPGDI
                     PVVPLNFVMISLEGPFNRDTIEGCVKETLLFLSRSISVKQKVEFTFKGIGVLSIRDSK
                     VKMRFYKDFLCSMDGSGILTKALANRPGTMDSVLSSRESYRKRPNSAMAFPRIEHKET
                     ENKTPVEVVGEEGGENRPRKIKLKDQSDKEGGAREISSPKKHRERQSISPAKVTSVSL
                     LDKFERSGNGGKITACENLSSPGCQRNDNERPRTSPAPACQDHNKAGQEMCYVCLQRA
                     QRNFALHYGDERRRREIEDERLMQQYQILKDQEAFFKNQVKGMAAREQNQKNAAYNLG
                     VAEAIRNHKNEKPEFYKSFLFDKRPLSPEINAFKQEEYSQSLLKQMESKREKEIKQRQ
                     NRELMDRLEQVQLTEELAAQRAQYLKEKMEETQHYKRALDAQVKNKPPQLPMFEPDSA
                     EPIFGKNDGEREMEKRKREQSCMKHQMEAAASHKRNTILNQLVDQRRDLQMLQRTQRE
                     HMADRAAEMDRVNRLNQCLQEDWDRSLAMKKQRDVEEKAFERASDKLFLLDQCEKYRR
                     CRQCQRRTCNTGESNLWPMNKFLQGSRLLV"
     exon            449..510
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            511..667
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            668..924
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            925..1004
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1005..1126
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1127..1250
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1251..1341
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1342..1488
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1489..1593
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1594..1766
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1767..1845
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1846..2066
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2067..2192
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2193..2691
                     /gene="Ccdc81"
                     /gene_synonym="4921513D09Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atagcaacag tttcagccat ccctttccca aggccttctt agttcagcaa ccctccaccc
       61 tccatctgca ggaggccctc gctgtttggg tgggcgtgga tgtgcacttc tggcttagcg
      121 agcggcagtg ctctggcttc gtgttggggg aacaggttat ccgcaagcca gatcaccggg
      181 gagggacggc gacaaagaat gtttatttaa ggaaaaataa tatcaaaaca tttcaagact
      241 tttaaaagca caccctaaat tctgggcaaa gagggctgga gggtgggaaa gtcaccttag
      301 tgcaaactcc atataacaaa gaagagacta tctatcgagg acccaccacg gagtcaatcg
      361 ggaccgaaga tgctggacag ggttgggcca ggttttcagg acctgtgcag gcaagtgctg
      421 cccacactgc cgacgctgag ccaagaggaa gtctctacta tctgggcgaa tgtttcagat
      481 tttgtggaac gacagctaac tatgcacaag ggtgttcaga tttcaggact tggaactttc
      541 actttctcaa ggcagcagct tgaggtggga aacaagaagt ttgttctagt gcagaggccg
      601 gtgtttatca tggcagagaa gttagtgcag acccacggac tcaaacaaaa caaagtattt
      661 tctcctggtg atattccagt tgttccactt aattttgtca tgatatccct ggagggtcca
      721 tttaacaggg atacaataga agggtgtgtt aaggagacac tacttttttt atcgagatcc
      781 atttccgtca aacaaaaagt ggagttcaca ttcaaaggaa ttggggtcct ttcgatcaga
      841 gacagcaaag tgaagatgag attttataag gacttcctct gttcgatgga tggaagtggc
      901 atcttgacta aagcccttgc gaataggcct ggcaccatgg actcggtgct gtctagcaga
      961 gagtcctaca gaaagcgtcc caacagtgcg atggcctttc caaggattga gcacaaagag
     1021 acagagaaca aaacacccgt ggaggtcgtt ggagaggaag gcggagagaa cagaccaagg
     1081 aagatcaagt tgaaagacca gtcagacaaa gaaggaggag ccagggagat atcatcaccc
     1141 aagaaacacc gtgagaggca atctatctct cctgctaaag tgacaagcgt cagcttgctg
     1201 gacaagtttg agcgaagtgg gaacggtggg aagatcacgg cctgtgaaaa cttgtcatct
     1261 ccaggttgtc agagaaacga caatgagagg cccagaacat ctcctgcccc agcttgccag
     1321 gatcataata aggcaggaca ggaaatgtgc tatgtgtgtt tgcaacgagc acaacggaat
     1381 ttcgcattgc actatggaga tgagaggagg aggagagaga ttgaagatga gcgacttatg
     1441 caacagtacc aaatcctgaa agatcaggag gctttcttca aaaaccaggt gaagggcatg
     1501 gctgctaggg agcagaacca gaagaacgct gcctataacc tcggagttgc tgaagctatc
     1561 aggaatcaca agaacgagaa acccgaattc tataaatcct tcctctttga taagcgacct
     1621 cttagtcctg agattaacgc ttttaagcag gaggaatatt cccaaagtct cctgaaacaa
     1681 atggaaagca aacgggagaa ggaaataaag caaagacaaa acagagagtt gatggaccgc
     1741 ttggagcaag tgcagctcac agaggaactt gctgcacaaa gagctcaata tctaaaagag
     1801 aagatggaag aaacacagca ctacaagaga gctttggatg cacaggtaaa gaacaaaccc
     1861 ccccagctgc ccatgtttga gccagactct gctgagccca tctttggtaa gaatgacgga
     1921 gaaagggaga tggaaaagcg aaagcgagag cagagctgca tgaagcatca gatggaggca
     1981 gccgccagcc acaagaggaa caccatcctg aaccagctgg tggaccagag gcgagatctg
     2041 cagatgcttc agaggacaca gagagagcac atggcagaca gagctgctga gatggatcga
     2101 gtgaacagac tcaaccagtg cttgcaagag gactgggaca ggagcctggc catgaagaag
     2161 cagcgggacg tggaggaaaa ggcctttgag cgggcttcgg acaagctgtt tctcttggat
     2221 cagtgtgaga agtatcggcg ctgcaggcag tgccagaggc gcacctgcaa cacgggcgag
     2281 agcaacttgt ggcccatgaa taagttcctg cagggctcac gattgctcgt gtagaactca
     2341 acgcttgaac ctactatttc ccgaggaaca tttatttgga gtagttgaat atttagcgtg
     2401 tgtatatttg tacctcagag gaaaaaaaga ttgagtactt tctaatcctt tcttgaattc
     2461 atgtcgacta attatttcct gcgtgtcccg ccttcctctc acccctgcgt attccctgaa
     2521 cttcgaaggc gttggaataa atcttagcct caacctcagt gctatagggg ctgcgaatgg
     2581 gaccaaactt ctcgctggat gctgaggggg agccgaccca gctttcattt agaaacttca
     2641 tattttccca tctataatga atacattata ataaatattt tctaaacgct c
//
