LOCUS       NM_001369029            1732 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus coiled-coil domain containing 7B (Ccdc7b), transcript
            variant 4, mRNA.
ACCESSION   NM_001369029
VERSION     NM_001369029.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC148114.8.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-250               AC148114.8         23568-23817
            251-574             AC148114.8         28850-29173
            575-661             AC148114.8         31922-32008
            662-745             AC148114.8         41628-41711
            746-766             AC148114.8         66357-66377
            767-799             AC148114.8         66630-66662
            800-948             AC148114.8         67314-67462
            949-1010            AC148114.8         87496-87557
            1011-1067           AC148114.8         89339-89395
            1068-1143           AC148114.8         93031-93106
            1144-1174           AC148114.8         94852-94882
            1175-1264           AC148114.8         101976-102065
            1265-1344           AC148114.8         120288-120367
            1345-1399           AC148114.8         123414-123468
            1400-1585           AC148114.8         134658-134843
            1586-1608           AC148114.8         137667-137689
            1609-1732           AC148114.8         140066-140189
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 76.17 cM"
     gene            1..1732
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /note="coiled-coil domain containing 7B"
                     /db_xref="GeneID:75453"
                     /db_xref="MGI:MGI:1922703"
     exon            1..250
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            251..574
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             302..1618
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /note="isoform 4 is encoded by transcript variant 4"
                     /codon_start=1
                     /product="uncharacterized protein LOC75453 isoform 4"
                     /protein_id="NP_001355958.1"
                     /db_xref="GeneID:75453"
                     /db_xref="MGI:MGI:1922703"
                     /translation="MKRAKHPSNISVKLTSVPELPYNKGLLNSSPKPKEKHNAKSTPD
                     KIEPMVIRSPPTGESIVRYALPIPSTMMKDLVSDAEMVRRIATNMKMLVTNLEETYGV
                     CYDDEEKEAEKSEAEGFSVGDDVSSFLLCCSQFAAQLEEAVKEEYNILESLFKWFQQQ
                     VNQIEEIGKDSLQKDRPSDVKFVKKNITQIARLMHKIEHIRGRLRERNLSTQSKKMDK
                     EIPPELIKSYGLVEKQIEEFITSHSALESQTETESQPGTPSSMANRVTMMMKIFENQT
                     AMLHKALNDQHTIESKYKQMETNYENLILKKNLLEGEIQRLRDPERVKSATKLERTKK
                     PGKSEKKKDKDLERNISPNREFKSFEELHQIQETERNKTQLDNVLPQKSEMFKEERTK
                     TKRGQSQNKSKVKIEDSKDSLPKKSDTQLGEQRKDQISSDQSKRAK"
     exon            575..661
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            662..745
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            746..766
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            767..799
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            800..948
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1010
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1011..1067
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1143
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1144..1174
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1175..1264
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1265..1344
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1345..1399
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1400..1585
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1586..1608
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1609..1732
                     /gene="Ccdc7b"
                     /gene_synonym="1700008F21Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agggtgggcc aggcgcgtgc cctgtggtcg gttgttacca ccctgggcgc aaaggccccc
       61 ctttcccttt cagcacagat gtcagtttgt actggggcag agctgttgtc tggagagttt
      121 gctggcatct tccaaagagg tgtaggaaac gcggaattta caactttctc agacaaatag
      181 attctcacct tccagcctgc caccccaaag ccaagccacc cagtaagacc acttccaaca
      241 gcctcagcag ggaggtactg aatttttcac atgtaatttg gaagctaaat caatcacaga
      301 aatgaaacgt gcaaagcatc catcaaacat tagtgtgaaa ttgacaagtg ttccagaact
      361 accttataac aaaggcttac tgaattcatc acctaagcca aaagaaaaac ataatgccaa
      421 gtcgacacct gataaaattg aaccaatggt cattaggtct ccacccaccg gagaatcaat
      481 tgtacggtat gccttgccaa taccatcgac tatgatgaaa gatttagtat cagatgctga
      541 aatggtcagg aggattgcca caaatatgaa gatgcttgtt actaacttgg aagaaaccta
      601 tggagtttgc tatgatgatg aagaaaaaga agcagaaaaa agtgaagcag aaggcttttc
      661 tgttggtgat gatgtgagtt cattcttgtt gtgctgttca caatttgctg ctcagctgga
      721 ggaagcagtt aaggaagaat ataatatttt ggagtctctt ttcaagtggt ttcagcagca
      781 agtcaaccaa atagaggaga taggtaaaga tagtttacaa aaagatcgtc catcagatgt
      841 taaattcgtc aaaaagaaca ttacacaaat tgcaaggctc atgcataaaa ttgaacatat
      901 tagaggtcgc ctaagagagc gtaatttgtc cacacagtct aaaaaaatgg ataaagagat
      961 accaccagaa ttaataaaat cttatggact tgtagaaaag caaattgaag agttcataac
     1021 atcccattca gctttagaat ctcaaactga aactgaaagt cagccaggaa ctccttcttc
     1081 aatggctaat cgagtgacta tgatgatgaa aatatttgaa aaccagacag ctatgttaca
     1141 caaagcttta aatgatcagc atacaattga gtctaaatat aaacagatgg aaactaatta
     1201 tgaaaattta atattgaaga aaaacctgct agaaggtgaa atacaaaggc tgagagatcc
     1261 cgagagagta aagtctgcaa ccaaattaga gcgaactaag aaacctggaa aatcagaaaa
     1321 gaaaaaggat aaagatttag aaaggaatat atctccaaac agagaattta aatcatttga
     1381 agaactgcat caaatccaag aaactgaaag aaataagact caactcgata atgtcctacc
     1441 tcaaaagtca gagatgttta aagaagagag aactaaaaca aaacggggcc agagtcagaa
     1501 taaatcaaag gttaagattg aagattcaaa ggattcctta ccaaagaaga gtgacacaca
     1561 gttgggtgaa caaaggaagg atcagatctc atctgatcaa agtaaaagag ccaaatagaa
     1621 tttgtgaagt actttggaag cccctcaacc ttcccagagt ggatgggagc agaggaagat
     1681 tccacctcag caaatatatg gcattgcttg caataaaaaa cattcttctg ca
//
