LOCUS       NM_001166164            1252 bp    mRNA    linear   ROD 08-AUG-2023
DEFINITION  Mus musculus coiled-coil domain containing 74A (Ccdc74a),
            transcript variant 1, mRNA.
ACCESSION   NM_001166164
VERSION     NM_001166164.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC115733.14.
            
            On Mar 24, 2023 this sequence version replaced NM_001166164.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence because no single transcript was available for the
            full length of the gene. The extent of this transcript is supported
            by transcript alignments and orthologous data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR10662772.447011.1,
                                           SRR7345562.2139837.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-288               AC115733.14        156885-157172
            289-333             AC115733.14        157997-158041
            334-393             AC115733.14        158456-158515
            394-559             AC115733.14        159184-159349
            560-743             AC115733.14        160119-160302
            744-823             AC115733.14        160384-160463
            824-880             AC115733.14        160538-160594
            881-1252            AC115733.14        160756-161127
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 10.94 cM"
     gene            1..1252
                     /gene="Ccdc74a"
                     /gene_synonym="2310015A05Rik"
                     /note="coiled-coil domain containing 74A"
                     /db_xref="GeneID:72315"
                     /db_xref="MGI:MGI:1919565"
     exon            1..288
                     /gene="Ccdc74a"
                     /gene_synonym="2310015A05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            289..333
                     /gene="Ccdc74a"
                     /gene_synonym="2310015A05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            334..393
                     /gene="Ccdc74a"
                     /gene_synonym="2310015A05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            394..559
                     /gene="Ccdc74a"
                     /gene_synonym="2310015A05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            560..743
                     /gene="Ccdc74a"
                     /gene_synonym="2310015A05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            744..823
                     /gene="Ccdc74a"
                     /gene_synonym="2310015A05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            824..880
                     /gene="Ccdc74a"
                     /gene_synonym="2310015A05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            881..1252
                     /gene="Ccdc74a"
                     /gene_synonym="2310015A05Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agccagtact gagcggcggc gacgccttca tgagcggggc cgggctggcg gccggggctc
       61 ggcccctcag ctccgcggcc ccaggctccc ggggcgcggc ccgcctacgc ccgcgccctc
      121 ccgccggcct gcagcacgcg gggacgcagc cgcctccgct cgggttcagc gaagcacaga
      181 agcggatcct ggacctggaa aagagcctgc agttcctaca gcagcagcac tcggagacgc
      241 tagtcaaact ccacgaggag atcgagcacc tgaagcggga gaataaggat ctccactaca
      301 agctaatcat gaatgagaag cctcagaaaa aaggcagcat ctccacatgg agccttcact
      361 ctggcaagtc cgcctccaat tccacgatgt ccgccaactc tcaaggcaag accaggcccc
      421 agcccagctc cttcaagaaa caagagctga agtctgaagc cctccaaaag acagacctgg
      481 aagagcagtc actcagcagt gctgccctgt cccacagcag caagctggac agagtccctg
      541 gggctcaggg acaggccaaa gacgaggatg cagagccctc taattcaggg gccacgttgg
      601 tggggggcag ccatggccgg caagggacgg ggatggcccc cttaatgagc ctgcccccgc
      661 acctgcgcaa gcccaccaca gtgcagcagt gtgaggtggt catccgtcag ctgtggaacg
      721 ccaacctcct gcaggcccag gagctacggc acctcaagtc actcctggaa gggaaccaaa
      781 ggcccaaagc tgcagctgag gaggctgggc tgggttctcc aaaggaccag gacaccatgc
      841 agtttcccaa ggtcacctcc aagggcctta gtaagaagtg cttaattctg agcccaatgc
      901 ctgctgcaga gcgaggcatc ctgcctgcat tgaaacagag cctgaagaac aactttgctg
      961 agcggcagaa aaggctgcaa gtagtacaga gccgccgcct gcaccgctct gtgctgctga
     1021 gccggcgccc tggagcccgg ccatcctctc tcgatagtgg ctcacaccaa ccctattttg
     1081 cagccacacg caattccaaa acagacagaa cccacgacag ataaaagcac ttgctctcag
     1141 aaatgaggag attgtctatt ttctcgattt tattattcct gcatttatgc aaaggcacat
     1201 aatagaatgt tactctccta cctgtagact gaaaataaaa ttgtttctcc ta
//
