LOCUS       NM_001033185            1440 bp    mRNA    linear   ROD 30-JUL-2024
DEFINITION  Mus musculus coiled-coil domain containing 190 (Ccdc190),
            transcript variant 1, mRNA.
ACCESSION   NM_001033185 XM_150654 XM_917474
VERSION     NM_001033185.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1440)
  AUTHORS   Quina,L.A., Wang,S., Ng,L. and Turner,E.E.
  TITLE     Brn3a and Nurr1 mediate a gene regulatory pathway for habenula
            development
  JOURNAL   J Neurosci 29 (45), 14309-14322 (2009)
   PUBMED   19906978
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK141447.1.
            
            On Apr 6, 2007 this sequence version replaced NM_001033185.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK141447.1, CX224596.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1440              AK141447.1         2-1441
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 76.84 cM"
     gene            1..1440
                     /gene="Ccdc190"
                     /gene_synonym="1700084C01Rik"
                     /note="coiled-coil domain containing 190"
                     /db_xref="GeneID:78465"
                     /db_xref="MGI:MGI:1925715"
     exon            1..65
                     /gene="Ccdc190"
                     /gene_synonym="1700084C01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            66..307
                     /gene="Ccdc190"
                     /gene_synonym="1700084C01Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..987
                     /gene="Ccdc190"
                     /gene_synonym="1700084C01Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     coiled-coil domain-containing protein 190"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 190
                     isoform 1"
                     /protein_id="NP_001028357.1"
                     /db_xref="CCDS:CCDS15466.1"
                     /db_xref="GeneID:78465"
                     /db_xref="MGI:MGI:1925715"
                     /translation="MDRSMVKGPLYKQFDLERKSARQAEARLSLRLQRLEIICLYHVK
                     SLAREQRQLQKELQRLQQDIIKKRFSSYVGHEIQKRSKDVVTFLPPTGQRHAVPEPKI
                     RTLKNSVTQEVKTKIPVPSLHDPVLKDTLRSQEHLLSHGERTSCFKEGSPQGQEGEPT
                     NPLKGVDPSKDVSVPCHDQELSTNKTEDSGVSSQDGERGSAPANETRSENASQKPRGD
                     ADVQNSPSSVDYAGSFKDERTKPSFLELFEKAKNAHYVRHRVPPESERLLSIGEIFGH
                     KHYSLPRTGETL"
     exon            308..428
                     /gene="Ccdc190"
                     /gene_synonym="1700084C01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            429..1440
                     /gene="Ccdc190"
                     /gene_synonym="1700084C01Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1178..1183
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ccdc190"
                     /gene_synonym="1700084C01Rik"
                     /note="hexamer: AACAAG"
     polyA_site      1225
                     /gene="Ccdc190"
                     /gene_synonym="1700084C01Rik"
ORIGIN      
        1 agtgaagaaa acaagcttgg agccaaagaa acaaagattt tcctggtgag gagctgggtt
       61 tgcaggttat ctgtggtccc tggaggacac tggctttact gtcacccacg cgtgaggaag
      121 atggacagaa gcatggtgaa gggacctctg tataagcagt ttgacttgga gagaaagagt
      181 gccaggcaag cagaagccag actcagcctt agactgcaaa ggctggagat catctgcctc
      241 tatcacgtga aatcgctagc cagggagcag agacagcttc agaaagaact gcagcgcctg
      301 cagcaagata tcatcaagaa aaggttctct tcttatgtgg ggcatgaaat tcaaaagaga
      361 tcgaaagatg ttgtcacatt cttgccacca acaggacaga ggcacgcagt cccggagcct
      421 aaaattagaa cactgaaaaa cagtgttacc caagaagtta aaactaagat tccggtgccc
      481 tctttacatg accctgtcct caaagacacc ctgagaagcc aagagcacct tctatctcac
      541 ggtgagagaa ccagctgctt caaagaagga agcccacaag gccaggaggg agagcccacg
      601 aatccactga agggcgtgga ccccagcaag gatgtctctg tcccatgtca tgaccaagag
      661 ctgtccacca acaagacaga agacagtggc gtgtccagcc aagatggtga gagagggtca
      721 gcacctgcta atgagaccag atctgaaaat gccagtcaaa agccacgtgg agatgctgat
      781 gtacaaaatt cccccagctc cgtggactat gcaggaagct tcaaagatga acgcacaaag
      841 ccatccttcc tagagctgtt cgaaaaggcc aagaatgctc actatgtccg ccacagggtg
      901 ccccccgagt ctgagagatt acttagcatc ggagagatat ttggacacaa acactactca
      961 ctccccagaa caggggaaac actgtgaaaa tggtgccaag tcccttcctc tctgcctgtg
     1021 taatgtcgcc tgaccagaag atattctgta atcactatgg aaacgagacc cttcaaatag
     1081 ctgccgtagc aacgcacaga aacaagcaga aatgcaaaat aagctttctt ttgcaacctc
     1141 ggggaccctg cccttttgtt tggtcttcct cctaataaac aaggccacta tgaagaggaa
     1201 ggagagggaa aatactatga aaatatttta agttgcgaac ctgggcttat tttgaagaag
     1261 aaagtcttgt ttgtccgaag ctctgcgatg cttagagtgc cacctgctgg tcaaatggca
     1321 tagctatttg cctagttttc tttgaggtgg gggggtggga ggggtgggga gggtgttgca
     1381 tgggaactca actgaaatca cgtacggtga cctggtctcc agataaaagc tgttctagcc
//
