LOCUS       NM_001370887            1487 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus coiled-coil domain containing 188 (Ccdc188), mRNA.
ACCESSION   NM_001370887
VERSION     NM_001370887.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from AC118542.20.
            
            [WARNING] On Aug 19, 2024 this sequence was replaced by
            NM_001370887.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.204724.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-612               AC118542.20        7173-7784           c
            613-720             AC118542.20        6929-7036           c
            721-822             AC118542.20        6728-6829           c
            823-879             AC118542.20        6594-6650           c
            880-939             AC118542.20        6449-6508           c
            940-1004            AC118542.20        6282-6346           c
            1005-1056           AC118542.20        6099-6150           c
            1057-1106           AC118542.20        5782-5831           c
            1107-1487           AC118542.20        5317-5697           c
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 11.29 cM"
     gene            1..1487
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /note="coiled-coil domain containing 188"
                     /db_xref="GeneID:102638083"
                     /db_xref="MGI:MGI:3647803"
     exon            1..612
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /inference="alignment:Splign:2.1.0"
     CDS             85..1293
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 188"
                     /protein_id="NP_001357816.1"
                     /db_xref="GeneID:102638083"
                     /db_xref="MGI:MGI:3647803"
                     /translation="MEGPKPLGPCGHSHPQRPLAPVSSSHGGYLDQPCQGFVRCPCLV
                     PLQSTQSLESSRPFPAPGTGSGRPRVGGEAPGMFLSSEGEIPRRRAREPAGARQEGEA
                     EAEWGWPLHPGHEQGPPRQTGSPTSGPRPCPCPTLPPRGKATASSRPAPTQLQGRTLG
                     SAEQSFLQLEQENQSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWSPESAT
                     WPLEDRAPVQLLRQELCPGKEYFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMA
                     LNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAHCRTQARKQQQMMEKGRPQMGCSE
                     GLKGHLWLLALRLLLGALLACTAAYVYVVDPTPFEGLVPPLLSRAAVWKLRALLGPFL
                     RLEVDDFLPF"
     exon            613..720
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /inference="alignment:Splign:2.1.0"
     exon            721..822
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /inference="alignment:Splign:2.1.0"
     exon            823..879
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /inference="alignment:Splign:2.1.0"
     exon            880..939
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /inference="alignment:Splign:2.1.0"
     exon            940..1004
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /inference="alignment:Splign:2.1.0"
     exon            1005..1056
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /inference="alignment:Splign:2.1.0"
     exon            1057..1106
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /inference="alignment:Splign:2.1.0"
     exon            1107..1487
                     /gene="Ccdc188"
                     /gene_synonym="EG665975; Gm7873"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacatccaaa gtgccctcaa agagagtggc aggttagcca ggccagagcc tggacctgag
       61 gtcaggaacg ggtcacaggg actaatggag gggccaaaac ccctgggacc ctgtggacac
      121 tctcaccccc agcgtcctct ggccccagtt tcaagcagcc atggaggata cctggatcag
      181 ccctgtcagg gatttgtaag gtgtccctgt ctggtccccc ttcagtccac tcagtcatta
      241 gagtcttcca gacctttccc agctccaggg acagggagtg ggagacccag agtgggagga
      301 gaagcccctg ggatgtttct gtcaagcgaa ggagagatcc cacgacggag agctcgagag
      361 ccagcagggg ccagacaaga aggggaggct gaggcagagt ggggctggcc cctacatcca
      421 gggcatgagc aggggccacc taggcagaca ggatccccca cctcaggacc caggccctgc
      481 ccatgcccaa cactacctcc tagaggaaag gccacagctt catctagacc agctcccaca
      541 cagcttcagg gcaggacact ggggtctgca gaacaatcct ttctgcagct ggagcaggag
      601 aaccagagtc tgaaaaggca gaaccaggac cttcgggagc aactgggggc cctcctgggg
      661 ccagggcagc agttcctacc tctatgttcc gagcactcaa gctgtacagc cctggcctgg
      721 tctcccgagt cagccacctg gcccctggaa gacagggcac ctgtgcagct gctgcggcag
      781 gagctctgcc cagggaaaga gtactttgtg cggcagtccc agagtgagct gcaacagatc
      841 cgattgtcct ttgagaggaa gaagatggcc attactgagg tgtgggatgg tgtggccgaa
      901 gtacacatgg ctctgaacaa ccaagccacc gggctcctga acctcaagaa ggacatccgg
      961 ggtgtgttag agcagatgga agacattcag ctggagatac tgggggagag ggcccattgc
     1021 cgcactcagg ccaggaagca acagcaaatg atggagaaag gcaggccaca gatgggatgt
     1081 tccgagggcc taaagggcca cctctggctg ctggccttga ggctgctgct gggtgctctg
     1141 ctggcttgca cagcggccta cgtatacgtg gtggacccca cacccttcga ggggctggta
     1201 ccacccctgc tgagcagagc tgctgtctgg aagctcaggg ccctactggg ccccttcttg
     1261 cgcctcgaag tggacgactt cctgcctttc tagaccggaa gcccagtggc cccagcaagg
     1321 agaaggccag gtggctggct ctgttccagg gacccaaggg ccttactggt ccttgcctac
     1381 agcaccactg cacacagtct ctaccaagag ctgcagagaa gggtggagga ggggctagtc
     1441 ctgagggctg ggcctgcagc tggatataca gtcatgacac actttgc
//
