LOCUS       NM_172730               1757 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus coiled-coil domain containing 174 (Ccdc174), mRNA.
ACCESSION   NM_172730
VERSION     NM_172730.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC168852.2, AK039818.1, BC051147.1 and BY624970.1.
            
            On May 22, 2007 this sequence version replaced NM_172730.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC051147.1, AK156259.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-22                AC168852.2         87615-87636
            23-939              AK039818.1         2-918
            940-1746            BC051147.1         934-1740
            1747-1757           BY624970.1         397-407
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 40.9 cM"
     gene            1..1757
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /note="coiled-coil domain containing 174"
                     /db_xref="GeneID:232236"
                     /db_xref="MGI:MGI:2444652"
     exon            1..134
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            135..239
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            240..340
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            341..399
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            400..580
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            581..676
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            677..819
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            820..914
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            915..1047
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1048..1200
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1201..1757
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1483..1488
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /note="hexamer: AACAAG"
     polyA_site      1504
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /note="major polyA site"
     regulatory      1732..1737
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /note="hexamer: TATAAA"
     polyA_site      1752
                     /gene="Ccdc174"
                     /gene_synonym="C130022K22Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggttctgctg ccgggtgggg gtggcggact cgtagggtct gactgaggcc acagggaggc
       61 tgcgtcttgg gactggacgc cttggcggga cgatggaccg aaagaaaaag cctttggacg
      121 ttacagcctc ctcgttggta gatcttaagg cggagctctt tcgaaaacaa gaagaattca
      181 aacaagaaaa acttctaaaa gattctggag tttttggaaa accaaagaca attaataaga
      241 agccaagtat ctggagcaaa caaaatgcag gtgttacaag tcgagcagag aaagatgcgg
      301 aacaaaagct tgaggagcag aagactctag acaaagcaag ggaaaaattg gaagaaaagg
      361 ccaaattata tgaaaagatg actaaaggag attttctaga tgaggaagtg gaggacatgt
      421 accttgtgga tttcacacag aagatcatag acaagcgaaa agaaatggag gtgcttggtg
      481 ccacgagaga gtcccaaatc gaggaagaga gagatgatga tgataaagaa gagttttctg
      541 acaaagacat acctcctcct caagacccca gtgaggaatg ggtggattac gtggactctt
      601 tgggccgatc ccggcgctgc atgagaaagg atttaccaag tctattggag atggataaaa
      661 atcttcaggg gagacttttt gttagtcctg ccaatgaaaa aactttgtta tctgaagaca
      721 tgaggaaaga acttcagcgt cagcaatggg aggaagaaga aagggaagcc ttgaaaaagc
      781 caatggggcc catccattat gaagacatcc gggaaaatga ggcccgacaa cttggtgttg
      841 ggtattttgc ctttgcccga gacaaagagt taagaaacaa gcaaatgaaa actttagaga
      901 tgcttcgtga acagacaaca gatcagagaa taaaacgaga aaacataaag gaaaagagaa
      961 aagctatgtt agaagcaaga ctggcaaagc ttcgacaaaa gaagatgaaa aaatcaaaag
     1021 aggatggaac tgaagaagaa ggcagagaag cagatggagt tgttcctgag ccctcagagc
     1081 caaagcctgt acctgcccca gctcctgtgg cccagaacag caaggtggag gtcatcattc
     1141 aggagaggag ggacaccaag cctggggtgc cacacatccg agagtgggac cgagggaaag
     1201 acttttcctt tggattctgg tcgaagaagc agtcagaact ccgagctgag cgagatcctg
     1261 agtttgcccc accttcaaat tactttgtgg gtcaaaagag aactgctcct atgagtagcc
     1321 agccacagag cagaccagga tcagcaccaa gtgacttggg acattcctct ggccagagcc
     1381 aggaacccag ctcttcacac acatccactc ctgcctctga aagctcacca caagcgccca
     1441 cagtcacttt ccaaacacta gatgatatga tatcttatta taaacaagtc acatgacctg
     1501 taaagcatgc tggttgtatt tgtctcatag aagtcagtca ggactgagtt ttacttcttt
     1561 cttcctgtac tttcccaggg agcacaggct tgaggccaca ttagttgaca gggaggagtg
     1621 agagctcatt gactcttagg ttgttcattt tcttaccgct tggtataggg ggactatctt
     1681 ctctccatgc tgacccagct gtgactcatt tggggttcca ggtgtgtaaa ttataaatgc
     1741 taatctgaga aatactg
//
