LOCUS       NM_001166063             924 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus coiled-coil domain containing 152 (Ccdc152),
            transcript variant 1, mRNA.
ACCESSION   NM_001166063 XM_001472338
VERSION     NM_001166063.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 924)
  AUTHORS   Watahiki A, Waki K, Hayatsu N, Shiraki T, Kondo S, Nakamura M,
            Sasaki D, Arakawa T, Kawai J, Harbers M, Hayashizaki Y and Carninci
            P.
  TITLE     Libraries enriched for alternatively spliced exons reveal splicing
            patterns in melanocytes and melanomas
  JOURNAL   Nat Methods 1 (3), 233-239 (2004)
   PUBMED   15782199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC166491.8.
            
            On Jun 24, 2019 this sequence version replaced NM_001166063.2.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence because no single transcript was available for the
            full length of the gene. The extent of this transcript is supported
            by transcript alignments and orthologous data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.67697.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849381,
                                           SAMN00849382 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-31                AC166491.8         16858-16888
            32-120              AC166491.8         19191-19279
            121-226             AC166491.8         22178-22283
            227-295             AC166491.8         26463-26531
            296-360             AC166491.8         27940-28004
            361-463             AC166491.8         30157-30259
            464-591             AC166491.8         37439-37566
            592-675             AC166491.8         39278-39361
            676-924             AC166491.8         39635-39883
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 1.84 cM"
     gene            1..924
                     /gene="Ccdc152"
                     /note="coiled-coil domain containing 152"
                     /db_xref="GeneID:100039139"
                     /db_xref="MGI:MGI:3641617"
     exon            1..31
                     /gene="Ccdc152"
                     /inference="alignment:Splign:2.1.0"
     exon            32..120
                     /gene="Ccdc152"
                     /inference="alignment:Splign:2.1.0"
     CDS             34..798
                     /gene="Ccdc152"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 152
                     isoform 1"
                     /protein_id="NP_001159535.1"
                     /db_xref="CCDS:CCDS49571.1"
                     /db_xref="GeneID:100039139"
                     /db_xref="MGI:MGI:3641617"
                     /translation="MDQNSEECTKKIRTVNLDKLIDDFSQIEKKMIETAGKNNLLDIQ
                     LEKTNSLLKIMQTKETSMKEECIILHTMIKGLQQTVQYQHNLKDENEQLKRNVDFMKE
                     KLKSHEQEYKNKIAKLISEMKIKEEEHKTEMSKLYLDMQKKVELNEEKHKELMARKEM
                     EISELNAKLRTQEKEKQNEILRLHLEFDTKLARAQTKSKSYPDTTILLQSIYRRKLQH
                     LQEEKSKEIASLQNTIRDLEQRLAACKDTRLMRRRF"
     exon            121..226
                     /gene="Ccdc152"
                     /inference="alignment:Splign:2.1.0"
     exon            227..295
                     /gene="Ccdc152"
                     /inference="alignment:Splign:2.1.0"
     exon            296..360
                     /gene="Ccdc152"
                     /inference="alignment:Splign:2.1.0"
     exon            361..463
                     /gene="Ccdc152"
                     /inference="alignment:Splign:2.1.0"
     exon            464..591
                     /gene="Ccdc152"
                     /inference="alignment:Splign:2.1.0"
     exon            592..675
                     /gene="Ccdc152"
                     /inference="alignment:Splign:2.1.0"
     exon            676..924
                     /gene="Ccdc152"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggagactg gatgtcgcgc cttggcagca ggcatggatc aaaacagtga agaatgcacg
       61 aagaagatca ggactgtaaa tcttgacaaa cttatagatg acttctcaca gatagaaaag
      121 aaaatgatag aaactgctgg aaagaacaac cttctggata ttcagctgga aaagactaac
      181 agcttattaa aaataatgca aacaaaagaa acctcgatga aagaagaatg tattattctt
      241 catactatga taaaagggct acaacagact gttcaatatc aacacaattt gaaagatgaa
      301 aatgaacaac taaaaagaaa tgttgatttt atgaaagaaa agttaaaatc tcatgaacag
      361 gaatataaga ataagattgc caaactcata agtgaaatga aaatcaaaga ggaggaacat
      421 aaaaccgaaa tgagcaaact ttatcttgat atgcagaaaa aagttgaact aaatgaagaa
      481 aagcacaaag aactaatggc aaggaaggag atggaaatat cagagttaaa tgcaaagttg
      541 aggactcagg agaaggaaaa gcaaaatgaa atcctcagac tgcatctaga atttgacact
      601 aaactagcaa gagctcagac taaatcaaaa tcatatccgg acacgactat tttgctgcag
      661 agtatctaca gaaggaagct tcagcatctt caggaagaaa agagcaaaga aattgcaagt
      721 ctgcagaaca ctatccgaga cctagagcag cgccttgcag cctgcaaaga tacccgcctc
      781 atgcgaagac ggttttgagc agagcactta atgcattagt tacaacttag ggttttggtt
      841 tttttttttt ttaaggcatt aaaaaaatca cttctatttt caatgtgagc atgctgaaca
      901 ataaagacac acacttgaaa ggtt
//
