LOCUS       NM_030025               3816 bp    mRNA    linear   ROD 13-JUN-2024
DEFINITION  Mus musculus coiled-coil domain containing 150 (Ccdc150),
            transcript variant 1, mRNA.
ACCESSION   NM_030025 XM_129746
VERSION     NM_030025.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3816)
  AUTHORS   Skarnes,W.C., Rosen,B., West,A.P., Koutsourakis,M., Bushell,W.,
            Iyer,V., Mujica,A.O., Thomas,M., Harrow,J., Cox,T., Jackson,D.,
            Severin,J., Biggs,P., Fu,J., Nefedov,M., de Jong,P.J., Stewart,A.F.
            and Bradley,A.
  TITLE     A conditional knockout resource for the genome-wide study of mouse
            gene function
  JOURNAL   Nature 474 (7351), 337-342 (2011)
   PUBMED   21677750
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC124175.2 and AC124538.4.
            
            On Oct 18, 2022 this sequence version replaced NM_030025.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK029994.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-205               AC124175.2         114336-114540       c
            206-369             AC124175.2         105134-105297       c
            370-590             AC124175.2         101557-101777       c
            591-769             AC124175.2         101269-101447       c
            770-838             AC124175.2         92675-92743         c
            839-955             AC124175.2         87451-87567         c
            956-1085            AC124175.2         86381-86510         c
            1086-1129           AC124175.2         83448-83491         c
            1130-1222           AC124175.2         79594-79686         c
            1223-1330           AC124175.2         76279-76386         c
            1331-1455           AC124175.2         74395-74519         c
            1456-1633           AC124175.2         64738-64915         c
            1634-1702           AC124175.2         64153-64221         c
            1703-1816           AC124175.2         60244-60357         c
            1817-1888           AC124175.2         51005-51076         c
            1889-1996           AC124175.2         36157-36264         c
            1997-2059           AC124175.2         35676-35738         c
            2060-2188           AC124175.2         12097-12225         c
            2189-2358           AC124175.2         10433-10602         c
            2359-2452           AC124175.2         9441-9534           c
            2453-2622           AC124175.2         8388-8557           c
            2623-2749           AC124175.2         4103-4229           c
            2750-2944           AC124175.2         609-803             c
            2945-3013           AC124175.2         258-326             c
            3014-3175           AC124175.2         12-173              c
            3176-3262           AC124538.4         32748-32834
            3263-3382           AC124538.4         34529-34648
            3383-3816           AC124538.4         34916-35349
FEATURES             Location/Qualifiers
     source          1..3816
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 27.06 cM"
     gene            1..3816
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /note="coiled-coil domain containing 150"
                     /db_xref="GeneID:78016"
                     /db_xref="MGI:MGI:1925266"
     exon            1..205
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             149..3481
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 150"
                     /protein_id="NP_084301.2"
                     /db_xref="CCDS:CCDS35564.1"
                     /db_xref="GeneID:78016"
                     /db_xref="MGI:MGI:1925266"
                     /translation="METNLLPGGPSYGLLDESGVQMETTVCRPVLSPTHINGTASETF
                     TVLQQKMRIVEEQTSSLRDDLIMLGYGDRRGQLETPNYLEDPASQKAISPIPNEVICP
                     ESPGNLWRNYEFLVNRMCYLENLIQSLKMNIFHLQTEKESNPQKTAFLNDQLNIIQGE
                     HSKGLKLLQLEVMNLRQQLKVVKEEEDRAQDEMQRLTATLEIATETKKNAAVIEEELK
                     TTKRKMNLKIQELRRQLAQEKLVRESLETSASSMLLKVQEMGSVVEAERQQVHALQEK
                     CTALHSSMKTTQDLLAQEQRKNEDLGMTISQLKSDLNSRDNLICKLVEENKATQISLK
                     KEHEENIYLKSEILSLQDVSGKAQVLNDQLSKKCSELTSMLQVVKMENSRIIAEHQAI
                     LKVEQKMITETFQEQNLLLDAAHASITGELQAVQNEKAQLQIHLDHLILEHNQCLQKS
                     QEAEKRTVVQKELLESTIARLQGELKASLQEKKSLLEKNEWFQREVNKTEKEVAKEKC
                     NLEKELAESKEDINVLNQNLQTLMEENKHLTNKMASLEHHKATSDYQGKVEKALEKIT
                     DSKNMLAYEKGKLQTKVKQLEAQLHTFAETMLQKDHLHKLNKALEVKYTQANSELSAS
                     KAYLEQTEAHLKEMKSILGKNEEELAQAVKCRDAALKESQKLKGDLKALEDRESKKVG
                     NFQKQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERSLN
                     QQRVQKLEAEVDQWQARMLIVEAQHGSEIEPLQKSLDITREDNRKLAMSLEQALQTNG
                     HLQSKLDHLQEKLESKERERQSLEAFKEQVAEESKVEAELHAERIEALRKQFQTERET
                     AKKASQREVSELKKALDEANFRSVEVSRANRELRHKATELEKVVNSNKEKLKNQRAQI
                     KLHLSAKANNAQNMERMKQIEMELRQMEIIKDQYQKKNYEQSLSIQRFVSEMNTLQKE
                     MELLTKSQYETSARNKQQELRLVAERKMRLELENRCKELEETIRHLKRCKEATENKLK
                     EASVESEQITANLEEAHRWFKCRFDGLQLELTKNRLQRLPREDRWLEENQDMMHNVAT
                     SQSVLHRWETKQKYHSDTERKK"
     exon            206..369
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            370..590
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            591..769
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            770..838
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            839..955
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            956..1085
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1086..1129
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1130..1222
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1223..1330
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1331..1455
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1456..1633
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1634..1702
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1703..1816
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1817..1888
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1889..1996
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1997..2059
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2060..2188
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2189..2358
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2359..2452
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2453..2622
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2623..2749
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2750..2944
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2945..3013
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3014..3175
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3176..3262
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3263..3382
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3383..3816
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3661..3666
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3690
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /note="major polyA site"
     regulatory      3795..3800
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3816
                     /gene="Ccdc150"
                     /gene_synonym="4930511H11Rik"
                     /note="major polyA site"
ORIGIN      
        1 agggattccg gccagggtcc ctccccaagt ggagggccct gctgggccgg gaaaactaca
       61 cttcccggca tgcctcacct cgggtgcgcc tgcgtgccgg agcaaccctg ctggcgagcg
      121 ggttggttta aagagctgtt ttagttccat ggaaacaaac ttgctgcctg gaggaccgag
      181 ctacgggctg ttggatgaat caggggtgca aatggaaact acagtgtgca gaccagtcct
      241 gtctccaacc cacatcaatg ggacagcttc tgaaacgttc acagtacttc agcagaagat
      301 gagaatagtt gaggaacaga ccagctctct gagagatgac ctaataatgc taggatacgg
      361 tgacagacga ggtcaattag aaactccaaa ctatttagaa gaccctgcca gccagaaagc
      421 cattagtcct atcccaaatg aagtaatttg tccagaaagc ccaggtaatt tgtggaggaa
      481 ctatgaattt ctggtaaatc gaatgtgcta cttggagaac ctcattcagt ccttgaagat
      541 gaacatcttt cacctgcaaa ctgaaaagga atcgaatcca cagaaaacag cttttctgaa
      601 cgatcagctg aatataatac aaggggagca ttccaagggc ctgaagctgt tgcaacttga
      661 agtgatgaat ttgcgccagc aattgaaagt tgtcaaggag gaagaagaca gggcacagga
      721 tgaaatgcag agattgactg ccactctgga aattgccacg gagacaaaga agaatgcggc
      781 tgttattgag gaggaactaa agaccacaaa gcgtaaaatg aaccttaaaa tccaagagct
      841 acggcgacaa ctggctcagg agaagcttgt cagggaatct cttgagacat ctgcatcgtc
      901 catgctcctc aaagtacaag agatggggtc agtggtggag gcagaacggc agcaggtaca
      961 cgctttgcag gagaagtgca ctgccctaca cagctctatg aaaacaaccc aagacctgct
     1021 ggcccaggaa cagcggaaga atgaagactt ggggatgact atctcgcagc tcaagtctga
     1081 tctgaattcc agagataacc tcatttgcaa gttggtggaa gaaaataagg ctacacaaat
     1141 atctctcaag aaagaacatg aagaaaacat atatttgaaa tctgaaatac tatcccttca
     1201 agatgtatca ggaaaagcac aggttttgaa tgaccagctt tccaaaaagt gttcagagct
     1261 aaccagcatg cttcaggttg ttaaaatgga aaattcaaga attattgctg aacatcaagc
     1321 tattttgaag gttgagcaga aaatgataac agagacattt caagagcaaa atttactgtt
     1381 agacgcagcc catgccagca tcacaggaga gctccaagct gtgcagaatg aaaaggcgca
     1441 actccagata cacctagacc atttaatcct tgagcacaat cagtgtcttc agaaatcaca
     1501 ggaggctgag aagaggacag tggtccaaaa agaacttctg gaatcaacta ttgcaagact
     1561 acaaggtgaa ctgaaagcat cattgcagga gaagaagtct ctgctggaga agaatgagtg
     1621 gtttcagagg gaggttaata aaacagaaaa agaagtagcc aaagaaaaat gcaatttgga
     1681 aaaagaatta gctgaaagca aggaagacat taatgtgttg aatcaaaacc tgcagactct
     1741 aatggaagaa aataagcatc taacaaataa aatggcttcc cttgaacatc acaaagccac
     1801 ttctgactac caagggaaag tggaaaaggc cttggaaaaa attactgata gcaaaaatat
     1861 gctcgcctat gaaaagggga aactccagac aaaggttaaa cagctagaag cacagcttca
     1921 cacattcgct gaaaccatgc tgcagaagga ccatctacat aagctgaata aggctttaga
     1981 ggtcaaatat actcaggcaa actcagagct gagtgccagc aaggcgtatc tggagcagac
     2041 agaagctcac ctgaaagaga tgaaatctat tcttgggaaa aatgaggaag aactggccca
     2101 agcagtgaag tgtcgagatg ctgccctgaa agagagccag aagttgaaag gggacctgaa
     2161 ggcattggag gacagggaga gcaagaaggt gggaaacttt cagaaacaat tagcagaggc
     2221 taaagaagac aactgcaaag ttacaatcat gctggaaaat gtgctggctt ctcacagtaa
     2281 gatgcaggga gccctggaga aagtccagat agagctcgga cggagggatt cggagatcgc
     2341 aggccttaag aaggaaaggt ctctaaatca acaaagagta caaaagcttg aagcggaagt
     2401 ggaccagtgg caggccagga tgctgattgt ggaggcccag cacggcagtg agattgagcc
     2461 actacagaag tctctagata taactagaga agacaacagg aaactggcca tgagcctaga
     2521 gcaagctctc cagacaaatg gccatctgca gtcaaagctt gatcacctcc aagaaaaact
     2581 ggaaagcaaa gagcgtgagc ggcagagtct ggaagccttc aaagagcagg ttgctgagga
     2641 atccaaagta gaagcagaat tgcatgcaga gcgcattgaa gctctgagga agcagtttca
     2701 aaccgagaga gagactgcaa agaaagcatc acagagggaa gtttctgagc tgaagaaagc
     2761 tcttgacgaa gccaacttca ggtcggtgga agtgtcccgg gcaaaccgag agctacgaca
     2821 caaagctacg gagctggaaa aagtggtgaa cagtaacaag gaaaaactca agaaccaaag
     2881 ggcccaaata aagctgcact tgtcagccaa ggcaaataac gcacagaaca tggagaggat
     2941 gaagcaaata gaaatggaat tgaggcaaat ggagataatt aaggatcaat atcagaaaaa
     3001 gaactatgaa cagtccttga gcatccagag atttgtatct gagatgaata ccctgcagaa
     3061 ggagatggag ctgttaacta agagccagta tgagacctcg gcgagaaata agcagcagga
     3121 gctgagacta gtggctgaga gaaaaatgag gctggaacta gaaaatcggt gcaaggaatt
     3181 ggaagaaact atcagacacc tgaagagatg taaagaagca acagaaaata aactaaaaga
     3241 agccagtgtg gagtcagaac agataacagc taatctggaa gaggctcacc gctggtttaa
     3301 atgcaggttc gatggactac aacttgagct gacaaaaaac cggttgcaga ggcttccccg
     3361 ggaagacagg tggctggaag agaatcaaga tatgatgcat aatgttgcaa ccagccaatc
     3421 tgttctacat cgatgggaaa ctaagcagaa gtaccattct gacacagaga ggaagaagtg
     3481 accttgacac aggtgtctcc tccgtagaag ctattctgct ggccagcaag tggggctggc
     3541 ctgtttctac gttagaagac catgatgtgt gctgaaggtt ttgggctttg tcctttatga
     3601 actcttttct attactgcag aaccaaccca tctctttgtc cctttcccta ttttcttcca
     3661 aataaattta aactagtttg ttttatgata gtagatgtgt cacatggtat ttgctgtttt
     3721 caggaagaat ttagtgttgt gtgaaatggc cacagtaaga tgttctagat gaattttgta
     3781 cgatgttctc tggaaataaa attatttgta aaaata
//
