LOCUS       NM_001379231            3385 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus coiled-coil domain containing 149 (Ccdc149),
            transcript variant 2, mRNA.
ACCESSION   NM_001379231 XM_006503619
VERSION     NM_001379231.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3385)
  AUTHORS   Hansen GM, Markesich DC, Burnett MB, Zhu Q, Dionne KM, Richter LJ,
            Finnell RH, Sands AT, Zambrowicz BP and Abuin A.
  TITLE     Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
  JOURNAL   Genome Res 18 (10), 1670-1679 (2008)
   PUBMED   18799693
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC102735.9.
            
            On Mar 27, 2020 this sequence version replaced XM_006503619.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7974084.26208.1,
                                           SRR17784651.274983.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-228               AC102735.9         152343-152570       c
            229-390             AC102735.9         120051-120212       c
            391-429             AC102735.9         116690-116728       c
            430-537             AC102735.9         101724-101831       c
            538-654             AC102735.9         86968-87084         c
            655-827             AC102735.9         86028-86200         c
            828-900             AC102735.9         85109-85181         c
            901-985             AC102735.9         83699-83783         c
            986-1130            AC102735.9         81077-81221         c
            1131-1207           AC102735.9         73663-73739         c
            1208-1240           AC102735.9         72081-72113         c
            1241-1357           AC102735.9         66097-66213         c
            1358-3385           AC102735.9         55643-57670         c
FEATURES             Location/Qualifiers
     source          1..3385
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 27.94 cM"
     gene            1..3385
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /note="coiled-coil domain containing 149"
                     /db_xref="GeneID:100503884"
                     /db_xref="MGI:MGI:2685293"
     exon            1..228
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     CDS             181..1788
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 149
                     isoform 2"
                     /protein_id="NP_001366160.1"
                     /db_xref="GeneID:100503884"
                     /db_xref="MGI:MGI:2685293"
                     /translation="MDGDRTESDWQGLVSEYLVCKRKLESKKEALLILSKELDTCQQE
                     RDQYKLMANQLRERHQSLKKKYRELIDGDPSLPPEKRKQANLAQLLRESQDRTKHLGE
                     EIKELRQRLGEVQGDNKLLRMTIAKQRLGDEEIGMRHFAAHEREDLVEQLERAKEQIE
                     SLEHDLQASADELQDVKEERASYQDKVDRLNQELNHILGGHENRIIDVDALCMENRYL
                     QERLKQLHEEVSLLKSNIAKYKNALERRKNSKSQGKSSSSALTGVLSAKQVQDLLSED
                     HGCSLPATPQSIADLKSLATALLETIHEKNMVIQHQRQTNRILGNRVAELEKKLRTLE
                     VSGLWSLPGLSYNVSVGFGRGKDTILLNDQTLPTIQRSKSPLLKFVEQSTDNKESARD
                     GEIQKQEDESCAAAEALAEPEDAGKPAVSSTAPLSHANQQHLDFHHPPVPQPPSEEVN
                     TVGRESIQLTDGQQAADLEEVPREAPTEEQKCEPGLPPSSLASQEECTTTFQDHLPST
                     QPEVKASSVGGNRGISEGGDTRSTVHT"
     exon            229..390
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            391..429
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            430..537
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            538..654
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            655..827
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            828..900
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            901..985
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            986..1130
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            1131..1207
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            1208..1240
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            1241..1357
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
     exon            1358..3385
                     /gene="Ccdc149"
                     /gene_synonym="Gm447"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggctgacg tggaggcagc ggcgcgggca gccgcgggag gcggcggcgc ggaggctcgg
       61 aggttcctgg ccctctccgg gctgcgcggg gccggggtgg cggcggcggc ggcggcgaca
      121 ggagcaggag gaggagaagg gaggcggttg tgcagcccgc ccgcgcacgc aggaggggac
      181 atggacggcg atcggaccga gagcgactgg caggggctgg tgagcgagta cctggtgtgt
      241 aaacggaagc tggagagcaa gaaggaggct ctgctgatcc tctccaagga gctggacacc
      301 tgccagcagg agagggacca gtacaagctc atggccaatc agctgcgaga acggcatcag
      361 tccctgaaga agaagtatcg agagctgatt gatggagatc catcacttcc ccctgaaaag
      421 aggaagcagg ctaatcttgc acagctgctg agagaatcgc aggacaggac taagcatctg
      481 ggagaagaga ttaaagaact tcggcagagg cttggcgagg tccagggtga caataagctg
      541 ttgaggatga cgattgccaa acaaaggctt ggagatgaag aaatcggcat gaggcacttt
      601 gcagcccacg agcgggaaga cttggttgag cagctggagc gggctaagga acagatagag
      661 tcgttggagc atgacctaca ggcctcagcg gatgaactcc aggatgtcaa ggaagagcgg
      721 gcttcctacc aggacaaagt ggacagactg aaccaggagc tcaaccacat cctgggtggt
      781 catgagaacc gaattatcga tgtggatgca ctgtgcatgg agaacagata tctccaggag
      841 agactgaaac aactccacga ggaggtcagc cttctgaaat cgaacattgc caagtacaag
      901 aatgctctcg agagacggaa aaactccaag agccaaggca aatccagcag tagtgctctg
      961 actggggtct tgtctgcaaa gcaagttcag gatctgctct ctgaagacca tgggtgcagc
     1021 ctcccagcta ctcctcagtc catcgctgac ctgaagtctt tggccactgc cctgctggag
     1081 acgatccatg agaaaaatat ggtcattcag catcagaggc aaaccaacag gatcctaggg
     1141 aatcgagtgg cagagctgga gaagaaacta agaactctgg aagtttctgg cttgtggagt
     1201 cttccaggcc tgagctacaa tgtttcagtc ggattcggga ggggcaagga caccatactg
     1261 ctcaatgatc agactctccc caccatacag aggtcaaagt ccccactgtt gaagtttgtg
     1321 gaacagtcca ccgacaacaa ggagagtgcc agagatgggg agattcagaa gcaggaagat
     1381 gaaagctgcg cagctgctga ggcactggca gagcctgagg atgctggaaa gcctgctgtc
     1441 agctccacag ccccgctgag ccacgcgaac cagcagcact tggactttca tcatcctcct
     1501 gtaccccagc caccttcaga agaagtaaac acggtgggga gggagagtat tcaactgact
     1561 gatgggcagc aggctgcaga cctggaggag gtcccaaggg aggctcccac ggaggaacag
     1621 aagtgtgagc cggggctgcc cccatcgagc ctggcctccc aggaggaatg caccacaact
     1681 ttccaggacc acttgccttc cacacagcca gaggtcaaag catccagtgt gggaggtaac
     1741 agaggcatct cagagggcgg agacacaagg agtactgtgc atacatgagg ggcagagaga
     1801 ctgacagggt gacacactga tggcaccagg gagagcgagg aaaggaaagg ctgaggcctc
     1861 ggaacagtca catccaagcc cctttccgct aaacacctac ctttcctgtc tgcaaacgag
     1921 agaacgctct gatcctgcta tgagctggga gcacccaatg gtgccagtcc tgtctgattt
     1981 attaaagctg gcccgtgagc ttctcggtgt cacctatgtc tgctgaagac gtgctgctgt
     2041 gaacatggct gggcacggga attgtggttg ccatatggct gcctttctgc atccctcctc
     2101 ctgtcagcat ttgttttatt agagagaaga tgtttttcta ttagcattta atgttgtcca
     2161 tcaagatgat gggacaagct aggaaagcaa gggtttgttt tttttccctg ggtctcagtc
     2221 ttgggaatag ctaggtggct agaaggaaag gtgtaattga atgaaatgtg ttcatgaggc
     2281 catgggtgca ctttgtcatg tagtggtctc ggaggatccg ccagcaatgg aaaggcttgg
     2341 cactcagtgt ttcacagtgg caggcaggag gaacgagagc aggctgggaa aggtaagcta
     2401 gaggtaggag aggctgtttg ctgactgagt acagatctca gtgttctacc ctaggtctgg
     2461 agggatgggt aacaaacaac tgccaggagc aggggacttt ttagtggtac tttgattttt
     2521 gcattattgc tttttagatg atagaaatac tagccatctt tatccagcca aagctgcgga
     2581 taggatggtg tggttatctg aggtttggga aaagcttaat attgccccag ttccttacat
     2641 cactgaagaa gccgaaagca ttcactccat caatagaatt ttgcatctag gcctccaggg
     2701 gccagaattg atctcagaaa ctccagctag aaagaacgca gaggagaaat gcattcccat
     2761 tcatcgtaaa ccctgtctat gccctgggac tctccgggac aaggacaaac ctgacgggag
     2821 ccccaatgtc ctgtttatct ctatttcagt ctgtcccctg cccctgaagg ccaacccttt
     2881 agggaaggag gccctgaggc tgcaagttta cacaggctag tagtcccgaa ggtgcctttt
     2941 ttcaatggat gggggccaca gctagttttt aggtgcctgt ggtcagtatt gctgcatagg
     3001 acaccagaat ggctaaggga aacccagcca gatgtgactc agaaaaaata aacactctca
     3061 cctcccagaa gctctggttt ggacacacat tcaacaggta cacttctttg tggccattca
     3121 tcattttcag gtaaaggggg tttatagtaa actctagcac agtctagtag ggcaagaaac
     3181 tgcagtgagc cccagggtct gtgctttagg gagacaggat aataggggtc tgtagcttga
     3241 gctcaatgta tacatccaga tggagagagc cattaagctg atgttgttat atatatgtaa
     3301 ctatgacaac aatatcccca cttctgctgt gtctacccaa catggttctt ctactctgta
     3361 gacattaaag agagtccagt cacta
//
