LOCUS       NM_001372501            4005 bp    mRNA    linear   ROD 12-FEB-2024
DEFINITION  Mus musculus coiled-coil domain containing 148 (Ccdc148),
            transcript variant 4, mRNA.
ACCESSION   NM_001372501 XM_017317503
VERSION     NM_001372501.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4005)
  AUTHORS   Leikauf,G.D., Concel,V.J., Liu,P., Bein,K., Berndt,A., Ganguly,K.,
            Jang,A.S., Brant,K.A., Dietsch,M., Pope-Varsalona,H., Dopico,R.A.
            Jr., Di,Y.P., Li,Q., Vuga,L.J., Medvedovic,M., Kaminski,N., You,M.
            and Prows,D.R.
  TITLE     Haplotype association mapping of acute lung injury in mice
            implicates activin a receptor, type 1
  JOURNAL   Am J Respir Crit Care Med 183 (11), 1499-1509 (2011)
   PUBMED   21297076
  REMARK    GeneRIF: Ccdc148 is associated with acute lung injury
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX649232.1, CU210857.3, CR626863.4, AL929070.15 and AL844163.7.
            
            [WARNING] On Jul 19, 2024 this sequence was replaced by
            NM_001372501.2.
            
            On Sep 3, 2019 this sequence version replaced XM_017317503.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.4644954.1,
                                           SRR14995048.631957.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849378 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-337               BX649232.1         28011-28347         c
            338-400             CU210857.3         8346-8408           c
            401-522             CU210857.3         7319-7440           c
            523-626             CR626863.4         38938-39041         c
            627-709             CR626863.4         33838-33920         c
            710-858             CR626863.4         33179-33327         c
            859-954             CR626863.4         31929-32024         c
            955-1136            CR626863.4         31670-31851         c
            1137-1275           CR626863.4         12725-12863         c
            1276-1482           CR626863.4         10226-10432         c
            1483-1623           AL929070.15        106086-106226       c
            1624-1742           AL929070.15        78072-78190         c
            1743-1860           AL844163.7         165138-165255       c
            1861-2001           AL844163.7         162941-163081       c
            2002-4005           AL844163.7         157085-159088       c
FEATURES             Location/Qualifiers
     source          1..4005
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2"
     gene            1..4005
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /note="coiled-coil domain containing 148"
                     /db_xref="GeneID:227933"
                     /db_xref="MGI:MGI:3039583"
     exon            1..337
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            338..400
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     CDS             349..2148
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /note="isoform 4 is encoded by transcript variant 4;
                     coiled-coil domain-containing protein 148"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 148
                     isoform 4"
                     /protein_id="NP_001359430.1"
                     /db_xref="CCDS:CCDS89489.1"
                     /db_xref="GeneID:227933"
                     /db_xref="MGI:MGI:3039583"
                     /translation="MNRRDWPFMMIQRNDSSDILAVHMKDGTRSSRYKPVDYQQLRAL
                     TEATRSASASTEQKLQKAIETSRAAKEQMLIKQHKQVWWQEQERLKGIRCKLESEIRS
                     CLNEESIGSECFCELMNFEKELSEEWCAYLTAVIDPIQQLRTGLKRWYPTSQSAPCHE
                     GSDATEVLEEVDFVKKQSKAAFERLHQEQWHLEEDLLDLSVKLLDHSSEEKPNLLSEQ
                     PMELVTLDCPYPDLKSSILNEFCNFTERYQEKLEDFDLQLEDIRSNFQLSAEEHWTYQ
                     AVLDQYPGNLLGRRALYLDMLQRYFPHKSRHHLVEHEKYCDQYHFAREQRRILIDNWS
                     RSRKDFIQKAMLTLLEACAAHEMGSLLAKDRRRQQELCADLKAKVSQWRAQQEELSRL
                     EMEISARRREREEEKEKLWKKKELLRREETEIKIRKYWAMKQQKWQEMEKRDLRRLEE
                     LKKLMAEQSVKDRERVKYRQELLEKRLMERKKLALQEVQEEEERERRLEALRKQVAVA
                     VQSDPVRMMSETLAWKARTGSESEEEFILQKPLFTLTTYNEQQIISDPRLRFELALRE
                     AGLHKTQYAKEMLPKIGPQKPPRKDTESTVFKV"
     exon            401..522
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            523..626
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            627..709
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            710..858
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            859..954
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            955..1136
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            1137..1275
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            1276..1482
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            1483..1623
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            1624..1742
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            1743..1860
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            1861..2001
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
     exon            2002..4005
                     /gene="Ccdc148"
                     /gene_synonym="5830402J09; Gm38473"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggtcgccat ggagaccgat gctgttaaga gctagagggc caggagaagg tggggagtga
       61 agatgaaggt gtctgtagcc tccggcgcgg gagggggtgg ggggaaggag tattagggga
      121 ttcccgggag agggctctga aatcgggcgg gtcttgcttt tgagtattgc caagactctg
      181 catggtaggg cttgtcccca gcgtcaaagg cagaaacaac tgagcccccg gacttctact
      241 ttacattgaa agctcaggag tgggcgtttc atttttcctg catctgggga gcatgcgagg
      301 ctatatgcat tttgaccttt gagatctgtg cagcccgata cggaaagcat gaatagaaga
      361 gactggccct tcatgatgat tcagagaaat gacagctcag atatcctggc agtccatatg
      421 aaagatggaa ctaggagctc ccggtataag ccggtggact accagcagtt acgggcccta
      481 accgaagcca caaggtctgc gtctgcttcc acagagcaga agctccaaaa agccatagag
      541 acgtcaaggg ctgcgaaaga gcagatgctg atcaagcaac acaagcaggt gtggtggcag
      601 gaacaggaga ggctgaaggg gatcagatgt aaattggagt ctgaaataag atcttgtctc
      661 aatgaggaga gcattgggag tgaatgtttt tgtgagctta tgaattttga gaaagagctg
      721 tcagaagagt ggtgtgcgta ccttacagct gtcattgatc ctattcagca gctgagaacg
      781 ggcctgaaga gatggtaccc cacttctcag agtgcaccct gccatgaggg ctcagacgca
      841 actgaggttc tggaagaggt tgactttgtc aagaaacaat ccaaggctgc ctttgaaaga
      901 cttcatcagg agcaatggca cttagaggaa gaccttttgg acttgagtgt gaagttacta
      961 gatcactctt cagaagaaaa acctaacttg ctcagcgaac agcccatgga gttagtaacg
     1021 ttggactgcc catacccaga tctgaaatcg tcaatcctta acgagttctg taactttaca
     1081 gagagatatc aagagaaact tgaagatttt gatctgcaat tagaagacat acgcagtaac
     1141 ttccaactaa gtgcagaaga gcactggact taccaggctg tcttagacca gtatcccgga
     1201 aatctccttg gcagaagagc tctgtacttg gacatgttgc aaagatattt ccctcacaag
     1261 tccaggcatc atttggtaga acacgagaaa tactgtgacc agtatcactt tgctagagag
     1321 cagagaagaa tcctgataga caattggagc aggagcagga aagactttat acagaaagcc
     1381 atgctgactc tcctcgaagc ctgtgcagcc catgaaatgg ggagccttct ggccaaggac
     1441 aggagacggc aacaggaact atgtgctgac ctgaaagcca aggtttctca atggcgagcc
     1501 caacaagaag agctatcaag actggaaatg gaaatttcag ccagaagaag agaaagggaa
     1561 gaagagaaag agaaattgtg gaaaaagaag gaattgctac gaagggagga gacagagatt
     1621 aagataagaa aatactgggc tatgaaacag cagaagtggc aagaaatgga aaagagagat
     1681 ctccggcgtc tggaagagct gaagaagtta atggcagaac agtcagtgaa agacagagaa
     1741 agggttaaat atagacaaga attgttggag aagcgtttga tggagagaaa aaaattggcc
     1801 cttcaagaag tccaggaaga agaagagaga gaaaggcggc tggaagccct acgaaagcag
     1861 gttgctgttg ctgtccagtc tgacccagtt agaatgatgt cagagacact ggcctggaaa
     1921 gcaaggacag gctctgaaag tgaggaagaa ttcatccttc aaaagccgct cttcacactg
     1981 actacataca acgagcaaca gataatttcc gatcctcgac ttcgatttga gttagcactt
     2041 cgagaagctg gactccataa aacacagtat gccaaagaga tgttaccaaa aattggtcct
     2101 cagaagcctc caaggaagga cacagaatcg accgtgttca aggtctagag ggtacatgag
     2161 aacgaacact gcgtgaatac ggatagtgat gggcctgctt ctaaatgctt agaaaaagac
     2221 tgcacagaga aatcacagca tttattaaac aaccttccct ttttttagct tcaaagtttt
     2281 gttcgccatt tgctttttct ttaaataaca tgtattatta ccaaatttac caaaattatc
     2341 agacttcagt atagatgttg tcatttggca agctgttatt ttggaggttg gttttttttt
     2401 tttttttcta tgaagaggag ctgaaaataa ccattttcaa gggttgtcta ctccacaggt
     2461 acatgcattt cagcttgtta cttcagtatt tgatgtttaa ttatggaagc ttaattatca
     2521 ttaatacgtc tattgtttct tggttattct aagaggagat tcaacttttc tctaaattta
     2581 gaaatcagtt tggtacatca tgtttatggc aaaccaatta tctgaacact ctcagtttac
     2641 aaatctggct ttaaaagaaa ttagacagtg tcactatcac gggaatacct gtttttgttt
     2701 ttaactgaga agacatggca gtgtggttgt ttagaaagaa aaactgaaat tttatgatac
     2761 ttgaaaagtt attaaaagtt cctaattatc taagaaatcc ctagatgaat ttcttgaaaa
     2821 gaagtatctc aaataaagcc tgcctataaa attttggcta tctccaaaag gaagcaagaa
     2881 aaattttcag taagaaaatg tgttttttaa aacttctagg tgccaatcac agtaaggaga
     2941 ctgatgactt tttttttctt tatttttctt tgctgccatt tcctgtattt cctgtccaca
     3001 cctagacccc aggggtgtta tctctaggta gttctgagaa tgctctgaaa accacaaaac
     3061 ccagggctga ggatggagct cagctaggac acttgcctag aagcccaaag ctctgactct
     3121 gatccccagc gccccataaa ctggatgtgg tgggaaacat gagtctagca cttgggagat
     3181 gggaagcaag agtatcagag gtcaaggtca tccttggata tatagtcatt tacagccagc
     3241 ctgcaatata ggagaccctg ctgaaaaaaa gagagaaaga taggagagag caggcaagga
     3301 gagatgaagg gattgggaag agaaaaaagg acatcacaga aaacaggctg attggggctt
     3361 gtcgtgacca cccacagcat ggcaagtgtg cacaaaatca gcccagcctg tcagaataca
     3421 ttggcttctc tataagagtt ctacggagtg ggtgggggtg gagaccttat ccacatccca
     3481 ggatccatcc caatgcttcc ctacttctgc tctttacagc actataatgt ctcatcaaag
     3541 aatggagaag tcttaggaaa aggtagagag tggtaggcat ggatgtcttg gggggtcttt
     3601 ctaggggtcg aagtgttatt ttatgggacc ctgaccataa acccatggaa aactgctgtg
     3661 acaaaaatca tcgtgtgcaa aacagcgcga tatggatgct gctgagcctg tggatcctta
     3721 ctgtcctgga tgtccacacc aaagtcatgg gattgtgtcc aaacactatt gacacattaa
     3781 ctcttttaca ctctcttaag agctaaagat ttgggctgga gagatggctc agcagttaag
     3841 agcactgact gctcttccag gggtcctgag tttaattctc agcaaccaac cacatggtgg
     3901 ctctcacaac catttgtaat ggggatccga tgccctcttc tggtgtatat gaagacactg
     3961 tactcacata aataaaaata aataaataaa tattacaaaa acaaa
//
