LOCUS       NM_172824               4011 bp    mRNA    linear   ROD 14-JUN-2024
DEFINITION  Mus musculus coiled-coil domain containing 14 (Ccdc14), mRNA.
ACCESSION   NM_172824
VERSION     NM_172824.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4011)
  AUTHORS   Evsikov,A.V., Graber,J.H., Brockman,J.M., Hampl,A., Holbrook,A.E.,
            Singh,P., Eppig,J.J., Solter,D. and Knowles,B.B.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   2  (bases 1 to 4011)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154456.2.
            
            On Jan 12, 2023 this sequence version replaced NM_172824.3.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC095999.1, SRR1660825.128085.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-122               AC154456.2         155543-155664
            123-175             AC154456.2         160424-160476
            176-248             AC154456.2         161646-161718
            249-318             AC154456.2         161939-162008
            319-438             AC154456.2         162100-162219
            439-657             AC154456.2         169662-169880
            658-752             AC154456.2         169994-170088
            753-1263            AC154456.2         171220-171730
            1264-1405           AC154456.2         174357-174498
            1406-1476           AC154456.2         180171-180241
            1477-1695           AC154456.2         186272-186490
            1696-1828           AC154456.2         186570-186702
            1829-4011           AC154456.2         187843-190025
FEATURES             Location/Qualifiers
     source          1..4011
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 24.46 cM"
     gene            1..4011
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /note="coiled-coil domain containing 14"
                     /db_xref="GeneID:239839"
                     /db_xref="MGI:MGI:2443448"
     exon            1..122
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..2753
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 14"
                     /protein_id="NP_766412.3"
                     /db_xref="CCDS:CCDS49837.1"
                     /db_xref="GeneID:239839"
                     /db_xref="MGI:MGI:2443448"
                     /translation="MVRSGSRPGQVISSGRQPGAKLPNGKKGTHVRKIAHFNVDSACP
                     VQSDSESQTDTLQGLDGCASLLRDILKNEDSGSEMVYSENRCNSKPLEGRKNRSKKKG
                     PEKHVPSVVRKEILSSENRKWISNEASTGSDTAQRWSLQDHYRMYSPIIYQALCEHVQ
                     TQMSLMNSLALKNGPNGIHAVCHTMSNSGSQATPHSGFGCSPSASVWPPQQPSCPLMV
                     HSEVQTDADNQFESQSQATSVKYGDVPRDPFSVHPGVACGLPHADSPAVAKSRQLDLT
                     SCILPQQRAPKEAELLKCFQTHTSLFPAHGKDALSDSQAYQSPSQLQPAFLATNEEKC
                     AKEQFEEATNEGKHLSTHVQDAKIAKNVQQAENVSQTAEKIRLAKCLLGELKALMEED
                     SEVQRLVTEVEACVSGLSAVSGHPNVEVEIALALQPLRSENAQLRRQLRILNQRLREQ
                     EKTEKGPGNLELFSLQSLNMSLQNQLQESLKSQELLQSKNEELLKVIENQKEENKKFT
                     TLFKDKEQTLLHNKQQFDIEMTRVKMELEEALANEKNLRFKLETAEKESQILGITLRQ
                     RDAEVARLRELTRTLQSSMAKLLSDLSMDTARCRMGNSLTKSLLNVYDQQLQQDPAPA
                     QTSIMSYLNKLETNHSFIHSKLLNNEAAIEPDRLCESVLPPQRPPHSDAGTADGGSAS
                     GTVSAASVEDSDMDCETLTVIEDGCNVDSTVYIPFARNTSKKHSPLCKRLSPQPKLSV
                     AAAQLVSGSAQTSKGESKPRAPAVCSSRNEAEDAPGDLSSTYDTEDVQLLRKIKEAIG
                     KIPAAAEHAKEQATHHGPSAHPSPGVPVKGSIVPDSSFLNSDLMSDWSISSFSTFTSH
                     DEQDFRNGLAALDANIARLQKSLKTGLLEK"
     exon            123..175
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            176..248
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            249..318
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            319..438
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            439..657
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            658..752
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            753..1263
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1264..1405
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1406..1476
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1477..1695
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1696..1828
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1829..4011
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3993..3998
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /note="hexamer: AATATA"
     polyA_site      4011
                     /gene="Ccdc14"
                     /gene_synonym="G630039H03Rik"
                     /note="major polyA site"
ORIGIN      
        1 gggacaaggg aggtccggac atctcggcgg ttaattcttt ttttctcaag tattcgtttc
       61 cctacgcctg ggctcttctg aggctgagag aaatggtcag gtccggatct cgaccgggcc
      121 aggtgatatc ttcaggaagg caacctggag ctaagttacc aaatggaaag aaagggaccc
      181 acgtaagaaa aatagcacat tttaatgtag actccgcctg tcctgttcaa tctgattcag
      241 aaagtcagac ggacactctc cagggacttg acggttgtgc ttctttgctg cgggacattt
      301 tgaaaaatga agattcaggc tcagaaatgg tatattcgga aaacagatgc aattctaaac
      361 ctttagaagg cagaaagaac agatctaaaa agaaagggcc tgaaaaacat gttccttcag
      421 tggtccgaaa ggaaatatta tcatcagaaa ataggaaatg gatatctaat gaagcttcta
      481 ctgggagtga cacagcacag cgttggtcac tacaagatca ttatagaatg tactcaccga
      541 taatatacca agccctctgt gagcatgtgc agactcaaat gtcactgatg aatagcttgg
      601 ctttaaaaaa tggccccaat ggaatacatg ctgtgtgcca taccatgtct aattcaggct
      661 ctcaggcaac accacattct ggttttggct gttctccttc cgcttctgtc tggccacctc
      721 agcagccatc ctgcccccta atggtccact ctgaagttca gactgatgct gataaccagt
      781 ttgaatcaca aagtcaagcg acctctgtga agtacggtga tgttcccagg gatccgttta
      841 gtgtccatcc tggagttgca tgtggccttc cccacgctga cagtccagct gttgcaaaga
      901 gtcggcagct ggatcttacg agttgtattc tgccccaaca gagagctccc aaggaagcag
      961 agttactaaa gtgcttccaa acacacacgt ctctgtttcc agctcacggg aaggacgctc
     1021 tctcggacag tcaggcatac caaagtccct ctcagttaca gccagccttc ttggccacta
     1081 atgaagaaaa atgtgccaaa gaacaatttg aagaggccac aaatgaagga aagcatttaa
     1141 gcacacatgt gcaagatgca aaaatagcca agaatgtgca gcaggcagaa aatgtaagcc
     1201 agactgctga aaaaatcaga cttgccaagt gcttgttggg agagctcaag gccctgatgg
     1261 aagaggactc cgaagttcag aggttggtga cagaagtaga ggcgtgcgta tctggacttt
     1321 cagcagtgag cggccaccca aatgtggaag ttgaaatagc cctggccctg cagcccctga
     1381 gaagtgagaa cgctcagctg cggaggcaac tgagaatttt gaatcaacgc ctccgagaac
     1441 aagagaaaac cgaaaaggga cctggtaacc ttgaattgtt ttcccttcag tcgctgaata
     1501 tgtcgctgca gaatcagctg caagagtcgc tgaagagcca ggagttacta cagagtaaaa
     1561 atgaagagct cttaaaagtg atagaaaacc agaaagagga aaacaaaaaa ttcaccactt
     1621 tatttaaaga caaagagcag actctgcttc ataataaaca gcagtttgac attgagatga
     1681 ccagggtgaa gatggagttg gaggaagcct tggccaatga gaagaacttg cggtttaagc
     1741 tagagactgc agaaaaggaa agtcagatac tgggaataac actgcgccag cgagatgctg
     1801 aggttgcacg acttagagaa ttaaccagaa ctttacagag cagcatggcc aagctgctct
     1861 ctgatctcag tatggacact gcgcgctgca ggatggggaa tagcctcacc aaatcacttc
     1921 tcaatgtcta tgatcaacaa cttcaacagg acccagcccc tgctcagact tccataatga
     1981 gctacctcaa taaattagaa acaaatcaca gctttataca ttcaaagctg cttaacaatg
     2041 aggcagccat agagccagac agactctgtg aaagtgtgct gcccccacaa aggcctcccc
     2101 atagtgatgc ggggacagca gatgggggct ctgcatctgg aactgtctct gctgcttcag
     2161 tggaggattc cgatatggac tgtgaaaccc tcactgtaat agaagatggg tgtaacgtgg
     2221 acagtacagt ttatatcccc tttgcaagaa acacttctaa aaagcactcg ccactttgta
     2281 agagactatc cccccagcca aagctgagtg ttgctgcagc acagctagtc agtggcagtg
     2341 cacagacctc taaaggagaa agtaagccac gtgcacctgc agtttgttcc tcacgaaatg
     2401 aagcagaaga tgcacccgga gatctttcca gcacgtatga cacagaggac gtgcagctcc
     2461 tcaggaaaat caaagaagca attggtaaga tccctgctgc tgctgagcac gcaaaggaac
     2521 aggccacaca tcatggccca tcagctcatc ccagccccgg cgttccagtg aagggcagta
     2581 ttgttcctga cagcagcttt ctcaattctg acttgatgtc agactggagc atctcctctt
     2641 tctcaacgtt cacgtctcat gatgaacagg acttcagaaa cggcctggca gcactggatg
     2701 ccaatattgc tcgacttcag aagtccttaa agaccggcct tctggagaaa tgagtctggg
     2761 agagactgac ggagtgcttt tcttaaagag tagaacttgt tcatagtgta ttttgggttc
     2821 ccctagagag aacacttttt attattaatt atgtatgaaa taataaatgg agtaaattta
     2881 ctgttagaat attttaacac ctgaaggtta taaaaaaatt cttttaaaaa ccaacagttg
     2941 ctgagagaag aaagttgtag atgagcaagt actgtggtgc gttatttgac agcttgagtt
     3001 tcacagagag ttcctcactg tgcgactgct gggtcactgg tgcaggtacc gaggatttct
     3061 ggctggctgg aaggagaata ggaaaggagt cagtactgtt taaagtttcc tctctgcttt
     3121 ggaatatttg tgtgtttcat gatagtgtgc ttgtgtatgg gaatactctg tgttacaagc
     3181 tagggctgtc gatggcctgc attaacattt cagagagaaa agatgctggt gtacctacct
     3241 catacaaagc attgatttgt ccagggaaat accgatgatt ggttaatata tggtccttaa
     3301 atcttgggca ttttatttat atttgtcttg aatgcatgtt ttaagacctt taaaaataaa
     3361 gtcagactga taagataatg ctaaataacc aagttttacc ttagtaattt tgggttttga
     3421 ttttttgttt ttgtttttta gtaagaatta ttgggttttc cttaatgtct ttggaaatga
     3481 tggagttttg caaatctcag cactgggggt aactctgcct ttctgaccca attttccccc
     3541 atcatttagc tgagaacgtt gttctataat taacatggac tatgttgccc tctctgcttc
     3601 ctaatactag ccctttgtcc tgtcttgcca tatagcccaa gatgacttca gacattagat
     3661 cttcctccct caggctcctg agtgcaagcc ccagcagttc tcattcacct gctgtcacag
     3721 ctttctgttg aacaccaagt cctgccctgt cagtaactct tggtacatgt tacctgcctg
     3781 gtgtagttga atttggttct tggacagcct ctggcattcg agtagtctgc tggttccaaa
     3841 ttttctcctg cttctacaac ctctggagga ccctgctaga ctacttaata tttcttagac
     3901 tttatgggga ggggtctttt ttgtttgttc tacgtctaaa tgtattaaaa tgaattgtaa
     3961 actattttaa agatttattc attaacattt taaatatact tccttccagt a
//
