LOCUS       NM_001039228            2261 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus coiled-coil domain containing 121, retrogene 3
            (Ccdc121rt3), mRNA.
ACCESSION   NM_001039228 XM_894588 XM_913677
VERSION     NM_001039228.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK030210.1, AC123848.4 and BB018144.2.
            
            On Oct 24, 2012 this sequence version replaced NM_001039228.3.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK030210.1, BC150956.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-426               AK030210.1         2-427
            427-428             AC123848.4         59164-59165
            429-2233            AK030210.1         430-2234
            2234-2261           BB018144.2         680-707
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 54.69 cM"
     gene            1..2261
                     /gene="Ccdc121rt3"
                     /gene_synonym="EG625424; Gm6583"
                     /note="coiled-coil domain containing 121, retrogene 3"
                     /db_xref="GeneID:625424"
                     /db_xref="MGI:MGI:3648511"
     exon            1..2261
                     /gene="Ccdc121rt3"
                     /gene_synonym="EG625424; Gm6583"
                     /inference="alignment:Splign:2.1.0"
     CDS             198..1607
                     /gene="Ccdc121rt3"
                     /gene_synonym="EG625424; Gm6583"
                     /codon_start=1
                     /product="uncharacterized protein LOC625424"
                     /protein_id="NP_001034317.2"
                     /db_xref="CCDS:CCDS51615.1"
                     /db_xref="GeneID:625424"
                     /db_xref="MGI:MGI:3648511"
                     /translation="MESQGSRRGTLYPQRQGSGATLLPNRQKGGTAEPPLLPAKDETV
                     RIREDFSYRATLARKKAIHDFRVRWPELILLERKKKEELPVLGQSSSDFLPVASSCSS
                     MVSIINTDLDSTPSELLDSKVLAADSQAPPLQTPHMTILNSYLKPESLTRLEKRVRRK
                     TLAAMAELEQDMEAVKRRQSVLIRDIKDMQQDILCEKADSKLFLEYLQQKKEEKQRKY
                     DSLWKDYIQQCEEIEDRRRELVSTFTSRTAGLQKQLEQGRKLEASLRKKMKALEPVAQ
                     VKEHQEQTIQALELEKASIGTDLSLLDREAHLQFLKERAALEKQLEDLNLLESGEQIT
                     RKLKKKAKALDAMAKQAHKGFWEGIKAQNRELKTQLWQLNQEFCKLEAGKEKLERRKQ
                     RWKEQQWYLEALARGRERLQQQEYRRQQQENHHPRPQTAPPPALSRLLSARPKANPKK
                     WLPHPRKQTGAEAGALHKE"
ORIGIN      
        1 cacattctgc tctgcctgcg ccaaagacgc ctgtacctcc aacactggaa agacgtgcgg
       61 gaggtggtta cctgtgactg tagagccctg aggacgaaca gaagagactg ctgtagccag
      121 gagaaagtgc tgagcttctg agcccctggt agcaggatct gggaggggca aagccctgta
      181 tccagagggg aggaactatg gagtcccaag gaagtaggcg aggtaccctt taccctcaga
      241 gacagggaag tggagctact cttttgccca acagacaaaa aggcgggact gctgaaccac
      301 cattacttcc tgcaaaggat gagacagttc ggatacgtga agacttctct tacagagcta
      361 ccctggccag gaaaaaggcc atacatgact tccgggtgag gtggccagaa ctgattctcc
      421 tggaaaggaa gaaaaaggag gaactccccg tacttggcca aagctcatct gacttcctcc
      481 ctgttgccag cagctgctct tcaatggtca gcatcatcaa cacagacctg gacagcactc
      541 ccagtgagct cctggattct aaagtattgg ctgctgactc ccaagcccct cctttacaga
      601 ctccacatat gaccattctc aacagctatc tgaagccaga gtctctgaca cggctggaga
      661 agagggtgag gaggaagacc ctggcagcca tggctgagct ggagcaggac atggaagcgg
      721 ttaagagacg acagtcagtg ctcataaggg acatcaagga catgcagcag gacattttat
      781 gtgagaaagc agacagcaag ctattccttg agtacctaca gcagaagaag gaggagaaac
      841 agaggaaata tgactccctg tggaaagact acatccagca gtgtgaggag atcgaggaca
      901 ggaggcgaga gctggtctct accttcacct cccgcacggc aggcctccag aaacagctgg
      961 agcagggcag gaagcttgag gccagcttga ggaagaagat gaaggccctg gagcccgtgg
     1021 cacaagtgaa ggagcaccag gaacaaacga tccaggcctt agagctggag aaagccagca
     1081 taggaactga cctctcctta ctggaccgcg aggcacacct tcagttcctg aaggaaaggg
     1141 ccgccttgga gaagcaattg gaggatctga acctgctgga gtctggagag caaatcacca
     1201 gaaagctgaa gaagaaggcc aaggccttgg atgccatggc caaacaggct cacaagggct
     1261 tctgggaggg tattaaagct cagaacaggg agctgaaaac acagctctgg cagctgaatc
     1321 aggagttctg caagctggag gccggaaagg agaagctgga acggagaaag cagcggtgga
     1381 aagagcagca gtggtacctg gaggctctgg cccgggggag agagcgcctg cagcagcagg
     1441 agtaccgcag gcagcagcag gagaaccacc accccagacc acagacagct cctccaccag
     1501 cactgagccg tctattaagt gccaggccaa aagccaatcc taagaaatgg ctaccacatc
     1561 ccagaaagca gactggagct gaagctgggg cactacacaa agaatgagga tgctatctga
     1621 taatgcagag gacagaggca ccagggggac agagggctga gcttcttaga ggggcagagg
     1681 ggtcctgggc tgtttctcag gcttggctcc cacgcagtag cccgaagggc tattctaact
     1741 aaaagcttcc ctgcattggg aagctttgtt cttcagaagc tatacctccc gtgctccctg
     1801 ttgcagactt tggtgctcag ttcctgctct agtgtggccc tcatgatgac agggtgcatt
     1861 tgtaacaggt accttgcaca cagtcagccc atctcacagt aggagcattg gtgtcttagg
     1921 tgggcgcagg gtggcatttg gggaactggg ttctttatat ttgtgtccgg ctgaggccgg
     1981 attctttaca gagctgtggg gcgtggtgta gagtgtggcc ccgtgtttgg gccgtgtgct
     2041 cctgtgtgac aaattacagc cagcttttcg agtcctgggc gttgctccag gcaaaaagcc
     2101 tcagccttac attggagaat tttagctttt acttagctgt aataacataa actcatttaa
     2161 aactgtgcca aaaaaatgaa ctgctgaaca tacctttgat ttacagagtt aacttacaca
     2221 tgaaatgtta tttaaaaaca aaagcttgcc tgtgattatt c
//
