LOCUS       NM_001177504            2313 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus coiled-coil domain containing 121, retrogene 2
            (Ccdc121rt2), mRNA.
ACCESSION   NM_001177504 XM_894605 XM_913792
VERSION     NM_001177504.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK133454.1 and AC147377.4.
            
            On or before Apr 14, 2010 this sequence version replaced
            XM_913792.2, XM_894605.2.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK133454.1, SRR7652917.547997.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1180              AK133454.1         1-1180
            1181-1181           AC147377.4         229430-229430       c
            1182-2313           AK133454.1         1182-2313
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 54.72 cM"
     gene            1..2313
                     /gene="Ccdc121rt2"
                     /gene_synonym="EG625464; Gm6588"
                     /note="coiled-coil domain containing 121, retrogene 2"
                     /db_xref="GeneID:625464"
                     /db_xref="MGI:MGI:3648937"
     exon            1..2313
                     /gene="Ccdc121rt2"
                     /gene_synonym="EG625464; Gm6588"
                     /inference="alignment:Splign:2.1.0"
     CDS             164..1549
                     /gene="Ccdc121rt2"
                     /gene_synonym="EG625464; Gm6588"
                     /codon_start=1
                     /product="uncharacterized protein LOC625464"
                     /protein_id="NP_001170975.1"
                     /db_xref="CCDS:CCDS51616.1"
                     /db_xref="GeneID:625464"
                     /db_xref="MGI:MGI:3648937"
                     /translation="MESQGQSYPKWNTKGRRATIFPQREGAKTLIPSAIPAQLEETAF
                     LTPSYRTILSRKRALYDVRVRWPELVCKEQKVMGEDSYDVGFPYLDRKLTDVSSCSSE
                     ASISLKNQESSHSEFHNPSDFPGCLSEAPYVTILNSYLKPESMTRLEKKMRRRTLVLM
                     NQLEQEKEAAKFRRAVLLKDTRELQNEKSYEEAENKAFLEFLMKKNQKTQEKYDSLWK
                     DYIQQYQEIEDRRREMVSTFTSRTGSLQKQLKENKKLEASLKKKLKALAPIANIKESQ
                     DWEIETLELEKASIVADIPFLDREAHLQFLKERAALAKQVEDLNLLESGEDITRELKK
                     KTKAWDTAAKQAYEDFCHNINARNRQLRTELQQLDWEFCNLEDRREKLERRKQRWKEQ
                     QWYLEALTRGRERLQQQEHRRQQREHRRQQWEHPALDHLLGARQKANPKKWLPRPRKQ
                     TGAEAGTLHRE"
ORIGIN      
        1 ggacaaaggt ggtcggctgt gctagagctg gggcaatgta gggaaagtgg tggctttagg
       61 gacccggaca atggccggct ggaactactg tagcctacag aaggtgcaga gcatccggca
      121 gtgggatctg tgaagagcaa cacccttagg aggtgaaggg actatggagt cccaaggtca
      181 aagttaccca aagtggaaca ctaagggcag acgtgctacc atctttcccc agagagaagg
      241 agccaagact ttgataccct ctgcaatccc tgctcagctt gaagagactg ctttcctgac
      301 acccagctac aggactatcc tgagcaggaa aagggccttg tatgacgtca gggtgagatg
      361 gccagagcta gtctgcaagg aacagaaggt aatgggagag gattcatacg atgtaggatt
      421 cccatatctc gacagaaagc tcacagacgt aagctcctgt tcctcagagg ctagcatcag
      481 cctcaaaaat caggaaagca gccacagtga gttccacaac ccctcagatt ttccgggctg
      541 cctttcagag gctccttatg tgaccattct caacagctac ctgaaaccag agtcaatgac
      601 acggctggag aagaagatga ggaggaggac cctggtgctc atgaatcagt tggagcagga
      661 gaaggaagct gctaagtttc ggagggcagt gttgctgaag gacacaaggg aacttcagaa
      721 cgaaaagtct tacgaggaag cagagaacaa ggccttcttg gaattcctga tgaagaaaaa
      781 ccagaaaacc caggagaagt atgactccct gtggaaagat tacatccagc agtatcagga
      841 gatcgaggac aggaggcgag agatggtctc taccttcacc tcccgcaccg gaagtctcca
      901 gaagcagctg aaggagaaca aaaagctcga ggccagcttg aagaagaagc tgaaggctct
      961 ggctcccatc gccaacataa aggagagcca ggactgggag atagaaacct tagagctgga
     1021 gaaagccagc atagtagctg acatcccctt cctggaccgc gaggcacacc ttcagttcct
     1081 gaaggaaagg gccgccttgg cgaagcaagt ggaggatctg aacctgctgg agtctggaga
     1141 ggacatcacc agggagctaa agaagaagac caaggcctgg gataccgcgg ccaaacaggc
     1201 ttacgaggac ttctgccaca acatcaatgc tcggaacagg caactgcgaa cggagctcca
     1261 gcagctggat tgggagtttt gcaacctgga ggataggagg gagaagctgg aacggagaaa
     1321 gcagcggtgg aaagagcagc agtggtacct ggaggctctc acccggggga gggagcgcct
     1381 gcagcagcag gagcaccgca ggcagcagcg ggagcaccgc aggcagcagt gggagcaccc
     1441 agcactggac catctactgg gtgccaggca gaaagccaat cctaagaaat ggctgccacg
     1501 tcccagaaag cagactggag ctgaagctgg gacactacac agagaatgag gatgctatct
     1561 gataatgcag aggacagagg caccaggggg acagagggct gagcttctca gaggggcaga
     1621 ggggtcctgg gctggccttt ctctccagct tgtctcccac acagtagcta gaagggctat
     1681 cctaactgaa agcttccctg cattgggaag ctttgttctt cagaagctat acctcccgtg
     1741 ctcccagtac ctcctgtgct ccctgtacct cccatgctcc caatacctcc cgtgctccct
     1801 gtacctctcg tgctccctat tgcagacttt ggtgctcagt tcctggtcta gtgtggcctt
     1861 catgatgaca gggtgcatct tgtaacaggc accttgcaca cagtcagccc atctcacagt
     1921 aggagcatcg gtgtcttagg tgggcacaga gtggcatttg gggaactggg ttctttgcat
     1981 ttgtgtccag ttgaggccgg attgtttaca gtgttgtggg gtgtggtgta gagtgtggcc
     2041 ccctgtttgg gccttgtgct cctgtgtgac aaattacagc cagctcttcg agtcctgggt
     2101 gttgctccag ccttacattg tagaatttta acttttactt agctattata acatgaactc
     2161 atttaaaact gtgccaaaaa atgaattgct gaacatacct ttggcttaca gagttaactt
     2221 gcatgtgaaa tgttctgttc ttaagcaacg ttattaaaaa aaaaaaaaag aagccaatct
     2281 atgattattc aaaataaaag tctgtttatc gtt
//
