LOCUS       NM_028312                845 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus coiled-coil domain containing 12 (Ccdc12), mRNA.
ACCESSION   NM_028312
VERSION     NM_028312.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Taniwaki,T., Haruna,K., Nakamura,H., Sekimoto,T., Oike,Y.,
            Imaizumi,T., Saito,F., Muta,M., Soejima,Y., Utoh,A., Nakagata,N.,
            Araki,M., Yamamura,K. and Araki,K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   2  (bases 1 to 845)
  AUTHORS   Cobellis,G., Nicolaus,G., Iovino,M., Romito,A., Marra,E.,
            Barbarisi,M., Sardiello,M., Di Giorgio,F.P., Iovino,N., Zollo,M.,
            Ballabio,A. and Cortese,R.
  TITLE     Tagging genes with cassette-exchange sites
  JOURNAL   Nucleic Acids Res 33 (4), e44 (2005)
   PUBMED   15741177
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 845)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   4  (bases 1 to 845)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK012610.1, BE627582.1 and CA450868.1.
            
            On Apr 25, 2009 this sequence version replaced NM_028312.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BE569987.1, BY711755.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-414               AK012610.1         2-415
            415-671             BE627582.1         150-406
            672-817             AK012610.1         673-818
            818-845             CA450868.1         552-579
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 60.37 cM"
     gene            1..845
                     /gene="Ccdc12"
                     /gene_synonym="2700094L05Rik"
                     /note="coiled-coil domain containing 12"
                     /db_xref="GeneID:72654"
                     /db_xref="MGI:MGI:1919904"
     exon            1..156
                     /gene="Ccdc12"
                     /gene_synonym="2700094L05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             61..561
                     /gene="Ccdc12"
                     /gene_synonym="2700094L05Rik"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 12"
                     /protein_id="NP_082588.2"
                     /db_xref="CCDS:CCDS23570.1"
                     /db_xref="GeneID:72654"
                     /db_xref="MGI:MGI:1919904"
                     /translation="MAAAPAGVGRLEEEALRRKERLKALREKTGRKDREDGEPQTKQL
                     REEGEEVGKHRGLRLRNYVPEDEDLKRRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEV
                     DLANLAPRKPDWDLKRDVAKKLEKLEKRTQRAIAELIRERLKGQEDSLASAVDATTGQ
                     EACDSD"
     exon            157..224
                     /gene="Ccdc12"
                     /gene_synonym="2700094L05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            225..304
                     /gene="Ccdc12"
                     /gene_synonym="2700094L05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            305..366
                     /gene="Ccdc12"
                     /gene_synonym="2700094L05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            367..401
                     /gene="Ccdc12"
                     /gene_synonym="2700094L05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            402..478
                     /gene="Ccdc12"
                     /gene_synonym="2700094L05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            479..821
                     /gene="Ccdc12"
                     /gene_synonym="2700094L05Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcctgctca ctgagcctgc gcgaggcaga agtgaaaagg aggtgggggc ctccgaaaag
       61 atggcggctg ctcctgccgg tgtgggccgc ctagaggaag aggcgctgcg gcggaaagaa
      121 cggctgaagg ccctccggga gaaaaccggg cgcaaggaca gggaagatgg ggagccacag
      181 accaagcagc tcagagaaga gggagaggaa gttgggaagc acaggggact caggctccgg
      241 aactatgtcc cagaggatga agacctgaag aggaggcggg tcccccaggc caaaccagtg
      301 gcagtggagg agaaggtgaa ggagcagctg gaggcagcca agccagagcc tgtcattgag
      361 gaagtggacc tggccaacct ggcaccccgg aaacctgatt gggatctcaa gagagatgtg
      421 gccaagaagc tagagaagct agaaaagcgg acccagagag ccatcgcgga gctgatccgt
      481 gagcggctaa aaggccagga ggacagcctg gcctctgcag tggatgccac caccggacaa
      541 gaggcttgtg actctgactg acatgttgtc cgtgtcccat ctgatctgtt cagcacacac
      601 atcctgtggg aagatggtct caggcaggga gggggttagg ctggccagta cttctgggtc
      661 ttgagaactg agccaaccta ctgagtctca gtttctgttg gtgtgacctg ttcatcgccc
      721 aagggtgccc accacgccga gtggctcaaa gctgggatct gtacatatgt atgcaaactg
      781 agcttttttc aacttctgca aataaacctc tatttagtag aaaaaaaaaa aaaaaaaaaa
      841 aaaaa
//
