LOCUS       NM_028492               1838 bp    mRNA    linear   ROD 16-FEB-2025
DEFINITION  Mus musculus coiled-coil domain containing 103 (Ccdc103),
            transcript variant 1, mRNA.
ACCESSION   NM_028492 XM_126497
VERSION     NM_028492.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL731670.13, AK032002.1 and AI836178.1.
            
            On Jul 4, 2018 this sequence version replaced NM_028492.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK032002.1, BC119104.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-20                AL731670.13        52153-52172
            21-1820             AK032002.1         2-1801
            1821-1838           AI836178.1         1-18                c
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 66.48 cM"
     gene            1..1838
                     /gene="Ccdc103"
                     /gene_synonym="1700039D13Rik; Dnaaf19"
                     /note="coiled-coil domain containing 103"
                     /db_xref="GeneID:73293"
                     /db_xref="MGI:MGI:1920543"
     exon            1..92
                     /gene="Ccdc103"
                     /gene_synonym="1700039D13Rik; Dnaaf19"
                     /inference="alignment:Splign:2.1.0"
     exon            93..172
                     /gene="Ccdc103"
                     /gene_synonym="1700039D13Rik; Dnaaf19"
                     /inference="alignment:Splign:2.1.0"
     exon            173..324
                     /gene="Ccdc103"
                     /gene_synonym="1700039D13Rik; Dnaaf19"
                     /inference="alignment:Splign:2.1.0"
     CDS             182..895
                     /gene="Ccdc103"
                     /gene_synonym="1700039D13Rik; Dnaaf19"
                     /note="isoform 1 is encoded by transcript variant 1;
                     coiled-coil domain-containing protein 103; dynein axonemal
                     assembly factor 19"
                     /codon_start=1
                     /product="dynein axonemal assembly factor 19 isoform 1"
                     /protein_id="NP_082768.1"
                     /db_xref="CCDS:CCDS25506.1"
                     /db_xref="GeneID:73293"
                     /db_xref="MGI:MGI:1920543"
                     /translation="MEKNDVINFKALEKELQAALAADEKYKRENAAKLRAVEQRVPSY
                     EEFRGIVLASHLKPLEQKDKMGGKRFVPWNCHTTRERTSQDVVTEIPQEKSPFQPTTS
                     AEFYRDWRRHLRSGPERYQALLQLGGPKLGHLFQMDVGFGLLGELLVALAEHARLSDR
                     TAVLGILHSLANTGRFNLNLSLLSHAERESCQRLFQKLQAMSTTRPMQEGLTVEEPSA
                     GLQGEEGLLQELLELYGVH"
     exon            325..457
                     /gene="Ccdc103"
                     /gene_synonym="1700039D13Rik; Dnaaf19"
                     /inference="alignment:Splign:2.1.0"
     exon            458..1821
                     /gene="Ccdc103"
                     /gene_synonym="1700039D13Rik; Dnaaf19"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      963
                     /gene="Ccdc103"
                     /gene_synonym="1700039D13Rik; Dnaaf19"
                     /note="major polyA site"
     regulatory      1801..1806
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ccdc103"
                     /gene_synonym="1700039D13Rik; Dnaaf19"
                     /note="hexamer: AATAAA"
     polyA_site      1820
                     /gene="Ccdc103"
                     /gene_synonym="1700039D13Rik; Dnaaf19"
                     /note="major polyA site"
ORIGIN      
        1 gctaggcaac aatctctgtt gcgagggcga tgcactaagg tgttctacca gatccggggt
       61 ttctcgagag aaagcaggga gtccaagact ggtgagaagc ctggaataca ttttcatcac
      121 gcaattccat tttacctgta aaggaagaaa ctagattttt ataacactcc aggccttagc
      181 catggagaag aacgatgtaa tcaacttcaa ggccctggag aaagagctgc aggctgccct
      241 tgctgctgac gagaagtaca aaagggagaa cgcagccaag ttacgggcag ttgagcaaag
      301 ggtgccttcc tatgaggagt tcagaggtat tgttcttgca tcacacctga aacctctgga
      361 acaaaaggac aagatgggag gaaagagatt tgtgccctgg aattgtcaca ctactcggga
      421 aaggacttct caagatgtgg tcactgaaat accccaggag aaatcaccct tccagcccac
      481 cacctctgca gaattttacc gtgattggcg gcgacactta agaagtgggc cagagcgcta
      541 ccaggcccta cttcagcttg gggggcccaa gctgggccac ctcttccaga tggatgtggg
      601 ctttggactt cttggggagc tgctggtggc attggctgag cacgcgaggc tgagcgaccg
      661 gacagcagtg ctggggattc tgcacagcct ggctaacact gggcggttca acttgaacct
      721 gagcctgctg agccatgcag agcgagagag ctgccagcgc ctgtttcaga agttgcaagc
      781 catgagcacc accagaccca tgcaggaggg cctcactgtg gaggagccat ctgctgggct
      841 acagggagaa gaagggctcc tacaggagct gctagaactg tatggagtcc attgatagga
      901 ctgtttgccc tcagcattcc tcagtggtct cagaaggcat tttaaaaaga cactttatgt
      961 gtatgagtgt ttttcctaca tgtatgtatg tatgtccacc atgtgggtac ccagtacctg
     1021 aggaggccag aactaggtgt tagagcctct gaaagtgtaa ttacaaatgg ttgtgagttg
     1081 ccttgtgggt gctgaaatca aacccaggtc ccctggaaga gaagccagtg ttcttaaccg
     1141 ctgagctatc tctccaggcc ccttggaagg aatcctgtgg tgtttacttt gtgccttctg
     1201 cagagttgtt gaaagaatgg ttgtgagaaa ttcacagcgc ttcccttttc aagtagtggg
     1261 ctttcccact tccccaaccc ataatttgat ctgtgtggat ccccaggata gccagtggct
     1321 cagctggctg agagtgtttt gctgcctgcc acgcccctag tgtcagataa gctctgatca
     1381 taactcctaa ccagactatt tataacccag agccagtgaa tgaacagctc atcaagaagc
     1441 aaacgcccct tcatctgaga tgcacaattt cccccgcttc ccagggactt aattctccca
     1501 caggttgagc ctgggaaatc cccaaacctt tggctcaggt ctggctagca tcccagatga
     1561 ccagctgtgc aagtgagggt ttcccattat ctctcggatg gatgaaagga tgttcttttg
     1621 ggcagggcag ggcagggcag ggcagagggc gcttccagcc cattctagat tcccctggcc
     1681 catttttggg taagtgccag tgttctagaa aggtgagagt gcgaagttct agaatgattt
     1741 tcccctcaag atcaggcctg acgcattagc attagaacgg catcttgtac ttgagctggg
     1801 aataaatcac ctcgcccttg gaaaaaaaaa aaaaaaaa
//
