LOCUS       XM_036158259             629 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus chromobox 3, pseudogene 5 (Cbx3-ps5), mRNA.
ACCESSION   XM_036158259
VERSION     XM_036158259.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000079.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="13"
     gene            1..629
                     /gene="Cbx3-ps5"
                     /note="chromobox 3, pseudogene 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 18 Proteins, and 66% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:544944"
                     /db_xref="MGI:MGI:3647433"
     CDS             81..629
                     /gene="Cbx3-ps5"
                     /codon_start=1
                     /product="chromobox protein homolog 3-like"
                     /protein_id="XP_036014152.1"
                     /db_xref="GeneID:544944"
                     /db_xref="MGI:MGI:3647433"
                     /translation="MASNKTTLQKMGKKQNGKSKKVEEAEPEEFVVEKVLDRLVNGKV
                     ECFLKWKGFTDADNPWEPEENLDCSELTEAFLNSQKAGKEKDGTERKSLSDRESDDSK
                     SKKKRDAADKPRGFARGLDPERMIGATDSSGELVFLMKWKDSDGAGLVLPKEANMKRP
                     QVVIDFYKERLTWHSCPEDEAQ"
ORIGIN      
        1 gcaggcggga gactctgcag gatctgcggc cctgagcatc ggagcggtga actcttcaag
       61 tctccgatta aatttaaaaa atggcctcca ataaaactac attgcaaaaa atgggaaaga
      121 aacaaaatgg aaagagtaaa aaagttgaag aggcagagcc tgaagaattt gtggtagaaa
      181 aagtactgga ccgtctagtg aacgggaagg tggagtgttt cctgaagtgg aaggggttca
      241 cagacgctga taatccttgg gaaccagaag aaaatttaga ttgttcagaa ttaactgaag
      301 catttcttaa ttctcaaaaa gctggtaaag aaaaagatgg tacagaaagg aaatctttat
      361 ctgaccgtga atctgatgat agcaaatcga agaagaagag agatgctgct gacaaaccaa
      421 ggggctttgc cagaggtctt gaccctgaac gaatgatcgg tgccacggac agcagcggag
      481 aattagtgtt tctcatgaag tggaaggact cggacggggc cggcttggtg ctgccaaagg
      541 aggcgaatat gaagcgtcct caggttgtca ttgacttcta caaggagcgg ctgacttggc
      601 attcttgtcc cgaagatgaa gcacaataa
//
