LOCUS       XM_006512969            3088 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus calcium channel, voltage-dependent, beta
            subunit associated regulatory protein (Cbarp), transcript variant
            X4, mRNA.
ACCESSION   XM_006512969
VERSION     XM_006512969.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006512969.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..3088
                     /gene="Cbarp"
                     /gene_synonym="9630008F14; Dos; R29144/1"
                     /note="calcium channel, voltage-dependent, beta subunit
                     associated regulatory protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 60 ESTs, 1044 long SRA reads, 5 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 30 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100503659"
                     /db_xref="MGI:MGI:1354170"
     CDS             252..2348
                     /gene="Cbarp"
                     /gene_synonym="9630008F14; Dos; R29144/1"
                     /codon_start=1
                     /product="voltage-dependent calcium channel beta
                     subunit-associated regulatory protein isoform X1"
                     /protein_id="XP_006513032.1"
                     /db_xref="GeneID:100503659"
                     /db_xref="MGI:MGI:1354170"
                     /translation="MQPTATMATAAATTATVALTTSWDNATSRPTAEPDPILDNYVLL
                     VVVMSLFVGGTLVVLSGVLLLCKRCWEVHQRFNRAMEEAEKTTTTYLDNGTHPIQDPD
                     CRGEDPEGQDTETERFLATSSTGRRVSFNEAALFEQSRKAQDKGRRYTLTEGDFHHLK
                     NARLTHLHLPPLKIATIHECDSGEASAAATPHPATTSKDSLAIFQPPGKTLTGHSVGP
                     SSALPGGPYNSVDFSEISPSTSSDSGEGISLDAGTRGAKAAGPETVPGEMGTGSSGSG
                     TVLQFFTRLRRHASLDGASPYFKVKKWKLEPSQRASSLDTRGSPKRHHFQRQRAASES
                     MEQEGDVPHADFIQYIASAGDSVAFPPPRPFLASPTSPPPTLGRLEAAEAAGGASPET
                     PPEHGISLGPEHAQQQDPQQEQDAEHAQCSYRDLWSLRASLELHAATASDHSSSGNDR
                     DSVRSGDSSGSGSGGGGAAPAFPPPPESPPALRPKDGEARRLLQMDSGYASIEGRGAG
                     DEVSELPAPARSPPRSPRAWPRRPRRDYSIDEKTDALFHEFLRHDPHFDDAPRHRTRA
                     HPHTHARKQWQQRGRQHSDPGGARAATPPGVARPTRAPLRRGDSVDCPPEGRALPITG
                     DDPSIPVIEEEPGGGGGGCPGSGLCVEPAGALLDKLAASLDERLFSPRLAEPVASSQV
                     LIVAAAAPTSPDHSPA"
ORIGIN      
        1 tttttttttt ttttggtttt tcgagacagg gtttctctgt gtagccctgg ctgtcctgga
       61 actcactctg tagaccaggc tggcctcgaa ctcagagatc cacctgcatc tgcttccgca
      121 gtgctaggat taaaggcgtg ccccaccacg cctggtgcat aggctcttat aatgagactg
      181 accctgggtt cgaacccagg caccaccggg aagagaactg tctgcaagtg gaaggagtta
      241 taagcctcaa aatgcagccc acggccacca tggccacagc ggccgccact accgccactg
      301 ttgccctgac gacttcgtgg gacaatgcca ccagccgccc cacggcggag cctgacccca
      361 tcttggacaa ctatgtgctg ctggtggtgg tgatgtcgct gttcgttgga ggcacgctgg
      421 tggtgctgtc tggcgttctt ctgctctgca aacgctgctg ggaggtgcac cagcgcttca
      481 acagggccat ggaggaagca gagaagacca ccactactta tctggacaac ggcacccacc
      541 ctatacaaga ccccgactgc aggggggaag accccgaggg ccaggacacc gaaacagagc
      601 gcttcctagc caccagctcc accggccgcc gcgtgtcctt caacgaggct gccctgtttg
      661 aacagagccg caaggctcag gacaagggcc gccggtacac cctgacagaa ggggatttcc
      721 atcacctcaa gaatgcccgc ctcacccacc tccacctacc gcccctcaaa atcgctacta
      781 tccatgagtg tgattcgggg gaggccagtg cagcggccac accccaccca gctaccacct
      841 ccaaggacag cttggctatt ttccagcccc ctgggaaaac cctcaccggc cactcagtcg
      901 gccccagctc cgccctgcca ggaggtccct acaactccgt ggacttctca gagatcagcc
      961 cctcaacctc cagtgactct ggggagggca tttcgttaga tgcaggtacc cggggtgcca
     1021 aggctgctgg gcctgaaaca gtgcctgggg agatgggcac aggctcctcc gggtcgggca
     1081 ctgttttgca attcttcact cggctacgcc gacatgccag cctggatgga gccagcccct
     1141 acttcaaggt caagaaatgg aagctggagc ccagccagag agcgtccagt ctggacacga
     1201 gaggttcccc taagaggcac cactttcagc ggcagcgggc agccagtgag agcatggagc
     1261 aggaggggga cgtcccccat gccgacttca ttcagtacat tgccagcgca ggcgactcgg
     1321 tggccttccc acccccccgc ccctttctgg ccagccccac cagcccgccc cccactctcg
     1381 gcaggctaga ggcagcagag gcggcgggag gagcgagccc tgagactcct ccggagcatg
     1441 gcatcagttt ggggcccgag catgcgcagc agcaggaccc gcagcaagag caggacgccg
     1501 agcatgcaca gtgcagctac cgtgacctgt ggagccttcg tgcttcgctc gagctccatg
     1561 cagccactgc atcggaccac agcagcagcg gcaatgaccg cgactcagtg cgcagcggcg
     1621 atagctcggg ctcgggttcc ggaggtggag gggcagcacc cgccttccca ccccctccgg
     1681 agtctccacc tgctttgagg cctaaggacg gcgaagcccg ccgcctgcta cagatggaca
     1741 gtggctatgc gagcatcgag gggcgcggag caggcgacga agtttcagaa cttcctgctc
     1801 cagcccgcag tcctccccgc agcccgcgag cctggccacg caggccgcgc cgcgattaca
     1861 gcatcgacga gaagacggac gctcttttcc atgagttcct gcgccatgac cctcattttg
     1921 acgatgcacc gcgtcaccgc acacgtgcac atcctcacac tcatgcgcgg aagcaatggc
     1981 aacagagagg acggcagcac agcgaccccg gtggtgcacg tgcagccacg ccccctggag
     2041 tggcccgccc tacacgtgcg ccattacgcc gtggggacag cgttgattgt cctcctgaag
     2101 gccgtgcgct gcccatcacg ggtgatgacc catccattcc tgtcatcgag gaggagcctg
     2161 gcggtggagg cggtggttgc ccaggctctg ggttgtgcgt tgagcccgcc ggggccctgc
     2221 tagacaagct agcagccagc ctcgacgaga gactcttctc tccccgtctt gctgagccag
     2281 ttgcctcatc ccaggtgctg attgtcgctg ctgctgcccc tacatcccct gaccacagcc
     2341 cggcctaagc tctgtactgg acctgcctct ctgctgcttc tccggcagca catggggctg
     2401 ctgtgggaat ggtggcaaca gcgggagcaa cctgaggtgg ccgtgcatgg gtacacggcc
     2461 cccaaatccc aagtgtgcac atatagtgtc ccctgggcac ttagcgcagt ggcctccgga
     2521 agcaagaggc tccaggaccc aggctcaact gcagggagga tgacgagact ggactctccg
     2581 gtccatatat ggttgacccc agcacccagc ctctggccac agatgctggt ggagcaggtt
     2641 ctgaggtgca tgtgcagcct ccctccagga tcagctgacc ctccactcgt gagcactggc
     2701 aggcagtaac actgcctgcc actgtgtgag cgaacctact ggaggtgaag tgactgtggg
     2761 gcactgagga tcagagagga gctcgccgcc ccatattctg agttgattta ccctgtccat
     2821 ggtatgcgct ctacctttcc tctctgagca ataaccgacc gcgcctgctc tctgcatgtg
     2881 cacaggctcc ccgtctcatt cctccccgag agccttgggc tttggacaca acggacagaa
     2941 cagcccaggt ggcagcttca agtttcccaa gctttattta ttgccaaaag atagggcaga
     3001 ctcgctgtga gtgcctgccc actccctgcc ctgcgccctc tgtggttggt cgtgttgtct
     3061 ggttaatcat aaatgtctct gcatattt
//
