LOCUS       NM_001368407            3607 bp    mRNA    linear   ROD 04-APR-2024
DEFINITION  Mus musculus cation channel sperm associated auxiliary subunit
            gamma 1 (Catsperg1), transcript variant 2, mRNA.
ACCESSION   NM_001368407
VERSION     NM_001368407.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3607)
  AUTHORS   Chung,J.J., Navarro,B., Krapivinsky,G., Krapivinsky,L. and
            Clapham,D.E.
  TITLE     A novel gene required for male fertility and functional CATSPER
            channel formation in spermatozoa
  JOURNAL   Nat Commun 2, 153 (2011)
   PUBMED   21224844
REFERENCE   2  (bases 1 to 3607)
  AUTHORS   Wang,H., Liu,J., Cho,K.H. and Ren,D.
  TITLE     A novel, single, transmembrane protein CATSPERG is associated with
            CATSPER1 channel protein
  JOURNAL   Biol Reprod 81 (3), 539-544 (2009)
   PUBMED   19516020
  REMARK    GeneRIF: CATSPERG is predicted to be a single
            transmembrane-spanning protein with a large extracellular domain
            and a short intracellular tail.
REFERENCE   3  (bases 1 to 3607)
  AUTHORS   Girard,A., Sachidanandam,R., Hannon,G.J. and Carmell,M.A.
  TITLE     A germline-specific class of small RNAs binds mammalian Piwi
            proteins
  JOURNAL   Nature 442 (7099), 199-202 (2006)
   PUBMED   16751776
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC164564.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN00849374, SAMN00849375
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-284               AC164564.3         47591-47874
            285-338             AC164564.3         47983-48036
            339-483             AC164564.3         51567-51711
            484-610             AC164564.3         51836-51962
            611-683             AC164564.3         52115-52187
            684-839             AC164564.3         53594-53749
            840-1011            AC164564.3         56081-56252
            1012-1149           AC164564.3         58262-58399
            1150-1209           AC164564.3         60108-60167
            1210-1317           AC164564.3         60296-60403
            1318-1368           AC164564.3         61252-61302
            1369-1498           AC164564.3         61412-61541
            1499-1610           AC164564.3         62577-62688
            1611-1769           AC164564.3         62945-63103
            1770-1879           AC164564.3         63193-63302
            1880-2093           AC164564.3         66768-66981
            2094-2156           AC164564.3         67727-67789
            2157-2355           AC164564.3         67881-68079
            2356-2474           AC164564.3         68185-68303
            2475-2555           AC164564.3         68489-68569
            2556-2612           AC164564.3         68650-68706
            2613-2769           AC164564.3         72923-73079
            2770-2833           AC164564.3         73265-73328
            2834-2929           AC164564.3         73426-73521
            2930-3019           AC164564.3         73748-73837
            3020-3112           AC164564.3         76187-76279
            3113-3212           AC164564.3         76384-76483
            3213-3607           AC164564.3         76590-76984
FEATURES             Location/Qualifiers
     source          1..3607
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 16.94 cM"
     gene            1..3607
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /note="cation channel sperm associated auxiliary subunit
                     gamma 1"
                     /db_xref="GeneID:320225"
                     /db_xref="MGI:MGI:2443617"
     exon            1..284
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     CDS             12..3467
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /note="isoform 2 precursor is encoded by transcript
                     variant 2; cation channel sperm-associated protein subunit
                     gamma 1; cation channel, sperm-associated, gamma 1;
                     catsper channel auxiliary subunit gamma 1"
                     /codon_start=1
                     /product="cation channel sperm-associated protein subunit
                     gamma 1 isoform 2 precursor"
                     /protein_id="NP_001355336.1"
                     /db_xref="CCDS:CCDS90197.1"
                     /db_xref="GeneID:320225"
                     /db_xref="MGI:MGI:2443617"
                     /translation="MVSRPAMSPVSPVWPRKPNLWAFWVLRLVLLLSLKSWAEDTLQH
                     CTWLLVLNKFEKVGLHLSKDRFQDHEPIDTVAKVFQKLTDSPIDPSENYLSFPYYLQI
                     NFSCPGQNSEELARKGHLMGMKPMVRINYMYSVNFYRWEMENLQILMEAAPMRSTGYC
                     PAEAMCILNWYTPMPFKNGSVVSSVDIYTNGIGPFIPKKRFYVNMNGFLKRDASGKSL
                     FAIGYESLVLKSSHFRLSKSRPLWYTVNHAPVFILGGFYDEKAILFSDSNFQDYVLLE
                     LSIDSCWVGSFYCPILGFSATIHDAIATESTLFIRQNQLVYYFTGTYSTLFDKSHGSS
                     RWVRVLPSECIKRLCPVYFSGNGSEYVLALTTGKNEGYIHIGTITDGLVSFEMVPDGW
                     SVCEKLPGKNCSIDWATYITDERNLLLLVKIDSGQFYLVNFNTEFKTLNILYKIPEFI
                     PEAKELDFLVLLDTVTYTNTPMTPKGLFFNTLNNMLYIWGNFILQSYNREEFIFLADF
                     PKESTIKYMVNSFKGQMAVVTENEEIWYFLEGGYDVYQVVPSQGWRTYLKLQKMQKSP
                     LYSTNESLVSLFYQDENLFQLVYLFDVGKERLVKRLLPVGTLMEYNLPKPFTVVNQGN
                     YKMITFTNTCPFKAIHAVDVPKKQHASRTESYVALPPLVSESLGFHNNNTLAVYQGLV
                     YYLLWLHSKYDKPYADPVHDPTWRWWQHKTKDKDYFFYLFSNRLAAEGIYINMNAYQK
                     LYNMSGDYGIPDLFFLDKGNWFTFTVVLLSHQDTFTSSDSQGPTINVDKKLSLSLVLA
                     DPECLSVTATREFLLNRNTLLTKIKVIDKKRCSEQGMVGRNIKKTSMLIKVLGAPGNC
                     IQRTYLGDHIQGIRLVPIFIGCPPGKRLAFDVSYTIKHSEEINKHYFDCVIKDAEMPC
                     FLFRDLFQPFFLVQDLVTGDSGSFLGSYVLKVVGGGRTLNTIRDYTEEEIFRYNSPLD
                     TTNSLIWKTKVERTTEDKKFYIMSHESPGVEWLCLENSPCYDIIPQSIYPPEFFFKLL
                     VSNRGVDNSTYCDYKLTFIVHIHGLPLSSKRSSFIVMVSTSFFIALVVFYILFCLVWP
                     HIVKAWVSFRWKIHNMMAPETYSSSSSSGGFTLHSHSSEGSFEGPSRPGTKEDNVQAK
                     RAKVA"
     exon            285..338
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            339..483
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            484..610
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            611..683
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            684..839
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            840..1011
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            1012..1149
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            1150..1209
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            1210..1317
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            1318..1368
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            1369..1498
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            1499..1610
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            1611..1769
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            1770..1879
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            1880..2093
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            2094..2156
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            2157..2355
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            2356..2474
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            2475..2555
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            2556..2612
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            2613..2769
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            2770..2833
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            2834..2929
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            2930..3019
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            3020..3112
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            3113..3212
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
     exon            3213..3607
                     /gene="Catsperg1"
                     /gene_synonym="A230107C01Rik; Catsperg"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttctagcta catggtgtcc cggccagcca tgtccccggt cagccctgtg tggccgagaa
       61 aaccaaacct ttgggcattc tgggtactgc ggctagtgct attgctgtcg ttgaagtcgt
      121 gggcggaaga taccttacag cattgcacct ggcttcttgt cctgaacaag ttcgagaagg
      181 taggcttgca tctctccaag gatcgatttc aagatcatga gcccatcgat acagtggcca
      241 aggtgttcca aaagttgaca gactcgccaa tcgatccgtc agagaactat ttgagctttc
      301 cttactactt gcaaatcaac ttttcctgtc cgggacagaa tagtgaggag ctggcccgaa
      361 agggccacct gatggggatg aagcccatgg tccggatcaa ctacatgtac tcagtcaatt
      421 tctaccgttg ggagatggaa aatttgcaga ttctgatgga ggctgctcca atgcgcagca
      481 cagggtactg cccggcagag gccatgtgca tcctgaactg gtacacaccc atgcccttta
      541 aaaacggctc cgtggtctcc tcagtggaca tctataccaa tggtataggg cccttcatac
      601 ccaagaaaag gttctatgtg aatatgaatg gcttcttgaa gagagatgca agtggtaaat
      661 ccttattcgc cataggatat gagagccttg ttctgaagtc gagtcacttt aggctttcaa
      721 aatcaagacc cctgtggtac actgtgaacc atgcccccgt gttcatcctt ggaggctttt
      781 atgatgaaaa ggccatcctg ttctcagatt ctaatttcca ggactatgtt ctcttggagc
      841 tgagtattga cagttgctgg gtcggctcct tctactgtcc cattcttggc ttctcagcca
      901 ccatccatga cgccattgcc accgagagca cactcttcat tcgacagaac cagcttgtct
      961 actatttcac aggcacctac agcacgctct ttgacaaaag ccatggcagt agcagatggg
     1021 ttcgtgtcct gcctagcgag tgcatcaaga gactgtgccc ggtgtatttc agtggcaatg
     1081 gttctgagta cgtcctagcc ctcaccactg gcaagaatga gggttatatt cacatcggga
     1141 ccatcacaga tggcctcgtg tccttcgaga tggtgccaga tggctggtca gtatgtgaaa
     1201 aattaccagg taaaaactgc agcatcgact gggctacata catcactgat gagaggaacc
     1261 tgctgttgtt agtgaaaatt gactctgggc aattttacct agtcaacttt aatacagagt
     1321 tcaagactct gaatatcctc tacaaaatac cagagtttat accggaagct aaggaactag
     1381 acttcttggt gctccttgat acagtgacat acaccaacac tcctatgaca cccaagggct
     1441 tgttcttcaa cacattgaac aacatgttgt acatctgggg caacttcatc ctgcaaagct
     1501 acaataggga agaattcatt tttctggcgg acttccccaa ggagtccacc atcaaataca
     1561 tggtcaactc tttcaaagga caaatggctg ttgtcacaga aaatgaagag atctggtact
     1621 ttctggaggg tggctatgat gtataccagg tggtcccttc ccaaggctgg cgcacctacc
     1681 ttaaactgca gaagatgcaa aagtctcccc tgtattctac aaatgagtcc ttggtctccc
     1741 tcttctatca ggatgaaaat cttttccagc tagtctatct ttttgacgtt ggaaaagaac
     1801 gtttagtcaa gaggctcctg cctgtgggaa cactgatgga gtacaacctg cccaaaccct
     1861 tcacagtggt gaaccaaggg aactacaaga tgatcacctt caccaacacg tgccctttta
     1921 aggccattca tgcagttgat gtgcccaaaa aacagcatgc atcacgcaca gagagctatg
     1981 ttgctctgcc acctctggtc tctgaatcct tgggcttcca caacaataac acactcgctg
     2041 tctatcaagg cctcgtctat tacctgctgt ggctgcactc caagtatgat aagccctatg
     2101 cagacccagt gcacgatccc acctggcgct ggtggcaaca caaaacaaag gacaaggatt
     2161 acttctttta cctgttcagc aaccggctgg cggcagaagg catatacatc aacatgaacg
     2221 cctaccaaaa gctctacaac atgtcgggtg actatggaat acccgatctt ttcttcctag
     2281 acaagggcaa ctggttcacc ttcactgtgg tcttattgtc acatcaggat accttcacaa
     2341 gctctgatag ccaaggaccc actattaatg tggacaagaa gctgtcattg tctctggtac
     2401 tggcggatcc tgagtgcctt tcagtaactg cgactcggga gttccttctt aatcgcaaca
     2461 ctctgctcac caagattaaa gtcatagata aaaagagatg ctccgaacag ggcatggttg
     2521 gacgtaacat caagaagact tccatgttga tcaaggtctt gggcgctcct gggaattgca
     2581 tccagcgcac gtaccttggg gaccacattc aaggtatcag gctggtacca atattcatcg
     2641 gctgtcctcc tggcaagcgc ttggcctttg atgtctccta cacgattaag cattctgagg
     2701 agataaacaa gcactatttc gactgtgtga ttaaagacgc cgagatgcca tgcttcctct
     2761 ttcgtgactt attccagccc ttcttcttag tccaagactt ggtgactggc gactctggca
     2821 gtttcttggg cagttacgtg ctgaaggtgg tgggtggtgg tcgcacactg aacaccatca
     2881 gagactacac ggaggaagaa atcttccgtt acaacagccc gctggacaca acgaatagcc
     2941 tcatctggaa aacaaaggtc gaaaggacca cggaggacaa aaagttctac ataatgtccc
     3001 atgagagccc tggagtcgag tggctgtgct tggagaactc cccttgctat gacatcatcc
     3061 cccaaagcat ctacccacct gagttcttct tcaagttgtt agtgagcaat agaggtgtag
     3121 acaatagcac atactgtgac tacaagctca cctttatagt gcacatccat gggctaccgc
     3181 tcagcagcaa gcggtcctcc ttcattgtta tggtgtctac cagcttcttt atagccctgg
     3241 ttgtcttcta catcctgttc tgcctcgtgt ggcctcacat agtgaaggcc tgggtctcat
     3301 ttcgctggaa gattcacaac atgatggcac cagagaccta ttcatcttcc tcctcttctg
     3361 ggggcttcac cctccattct cacagctcag agggaagttt tgagggtccc tccagaccag
     3421 gtaccaaaga ggacaatgtt caagctaaga gagcaaaggt ggcctgagtc cctggtctgt
     3481 actcttcctc atgaaccctt aggcctctcc tcatgggaat gcagcctgcc acctccccag
     3541 gactttctgg ttggctagaa tgctcatgtc tcattcagac cctaataaag cctccttgca
     3601 gaatcag
//
