LOCUS       NM_001034899            1663 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus cation channel sperm associated auxiliary subunit
            epsilon 2 (Catspere2), transcript variant 1, mRNA.
ACCESSION   NM_001034899 XM_900130 XM_915298 XM_923650 XM_923652 XM_923657
VERSION     NM_001034899.3
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC147686.1 and AK131684.1.
            
            On Sep 17, 2009 this sequence version replaced NM_001034899.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK131684.1, BB610249.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1557              BC147686.1         1-1557
            1558-1663           AK131684.1         1483-1588
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 82.87 cM"
     gene            1..1663
                     /gene="Catspere2"
                     /gene_synonym="Gm16432; Gm30473"
                     /note="cation channel sperm associated auxiliary subunit
                     epsilon 2"
                     /db_xref="GeneID:545391"
                     /db_xref="MGI:MGI:5589632"
     exon            1..150
                     /gene="Catspere2"
                     /gene_synonym="Gm16432; Gm30473"
                     /inference="alignment:Splign:2.1.0"
     CDS             83..520
                     /gene="Catspere2"
                     /gene_synonym="Gm16432; Gm30473"
                     /note="isoform b precursor is encoded by transcript
                     variant 1; catSperepsilon-like; catSper-epsilon-like;
                     cation channel sperm-associated protein subunit
                     epsilon-like protein; catsper channel auxiliary subunit
                     epsilon 2"
                     /codon_start=1
                     /product="cation channel sperm-associated protein subunit
                     epsilon-like protein isoform b precursor"
                     /protein_id="NP_001030071.2"
                     /db_xref="CCDS:CCDS35802.1"
                     /db_xref="GeneID:545391"
                     /db_xref="MGI:MGI:5589632"
                     /translation="MLARRVVAALLLWLSCCVSALWRYYINSQDYSIFSTRSSIKLEY
                     EGNSFVSWKIPESCKVENNTSPKTTLHCKRAGIHTIEPIARNQEVERHLTVDNSYICY
                     LWYFTVVDVYYNLSQIVTIWVYDPESASTEELIRTAKKPSLSS"
     exon            151..199
                     /gene="Catspere2"
                     /gene_synonym="Gm16432; Gm30473"
                     /inference="alignment:Splign:2.1.0"
     exon            200..273
                     /gene="Catspere2"
                     /gene_synonym="Gm16432; Gm30473"
                     /inference="alignment:Splign:2.1.0"
     exon            274..343
                     /gene="Catspere2"
                     /gene_synonym="Gm16432; Gm30473"
                     /inference="alignment:Splign:2.1.0"
     exon            344..408
                     /gene="Catspere2"
                     /gene_synonym="Gm16432; Gm30473"
                     /inference="alignment:Splign:2.1.0"
     exon            409..433
                     /gene="Catspere2"
                     /gene_synonym="Gm16432; Gm30473"
                     /inference="alignment:Splign:2.1.0"
     exon            434..511
                     /gene="Catspere2"
                     /gene_synonym="Gm16432; Gm30473"
                     /inference="alignment:Splign:2.1.0"
     exon            512..1663
                     /gene="Catspere2"
                     /gene_synonym="Gm16432; Gm30473"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagtgcaggg caacggaagc ctgggagctt gctagccctg caggccttgc agaagtggtt
       61 gcttagagga ggagttggcg ccatgttagc ccggcgggtg gtggcggcgc tgctgttgtg
      121 gctgagctgc tgtgtctcag ctctgtggag gtactacata aatagccaag actattccat
      181 ttttagtacc aggagttcta ttaaattaga gtatgaagga aactcatttg tgtcatggaa
      241 aataccagaa agctgtaaag ttgaaaacaa tacatcaccc aagacaacac tacactgcaa
      301 aagggctgga attcacacga tagagccaat tgccagaaac caagaagtgg aacggcatct
      361 gactgtggat aattcttata tttgctactt gtggtatttc acagttgtag acgtttatta
      421 caacttaagc cagattgtca ccatatgggt gtatgatcca gaaagtgcca gcactgaaga
      481 gctgataagg accgcaaaga aaccttcact gtcatcatag gtattttgaa ctgctcttga
      541 tctctgcaat tatatacctc tccactgagc attcttctga tcattggtga agagatggat
      601 cctttgtgtg ctttaaggat gtcctgcgag tatctccatt gaagccatgc ctccaaaaca
      661 tagctagggt aaaacagcaa ataagccagc cctttcttat attcattaca aatttaccgc
      721 tttgaagatt tgagttctgc attctgtttc aatgttaaca gagaaatatc agtgtcgata
      781 gttgctctca tgagcctgtt gctaccttag tgacttgtca ggaactctct gatgtaggat
      841 gtgtgagtgt gtgtatacac aagatatgtt gggctggagg catgccaggg tatgtgtgta
      901 gaggcctgga gacagcttag tgcacttggt cctctttctc cttactcctg tatttggatt
      961 ccagggattg aactttggtt gccaggctac agaggtttat tttgaatggc cccaggcatt
     1021 ggtttttagc tttttctgat cctgtcgaag tcattcattg gcccagttat ctcttaattt
     1081 ggttatttaa caaacctcct atttcacatt taaagcttcc tactatttaa aaatgtattc
     1141 atatttgtgt tctaaataag catggtatcc atattaaaat agaaaactag tggggtatgt
     1201 ttttgtttct tggttaacaa gtaagatgga aatatgaaaa tatctaacta tttgtctgcc
     1261 cttgaaatac aggcacttaa tataaaactt tggaaagagt aaaaaatgca aggcgtatat
     1321 tattttctta ccttccatta atttgttaaa taagttttac ttttaaaatg gtttacattt
     1381 acactattat tgctgagatg gttcctgttt tattatctta tacttgaata ttggtcacca
     1441 gttaggaact atggatacat tgatcctaag gcgtatattg tcttacctca gttttctcca
     1501 atcctttctc ctgtgtttgc taatcctatt gtggtagcac ttgacatttg gttgtccagt
     1561 ttccaggttg taagttgcta catgttttct ttgacctgga catgtttgaa gattcccaag
     1621 cacatatttt gcagaatgtc aataaactga gatttttctc atg
//
