LOCUS       XM_030249229            3747 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus cation channel, sperm associated 2
            (Catsper2), transcript variant X5, mRNA.
ACCESSION   XM_030249229
VERSION     XM_030249229.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030249229.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3747
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..3747
                     /gene="Catsper2"
                     /note="cation channel, sperm associated 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 68 long SRA reads, and 91% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     14 samples with support for all annotated introns"
                     /db_xref="GeneID:212670"
                     /db_xref="MGI:MGI:2387404"
     CDS             218..1681
                     /gene="Catsper2"
                     /codon_start=1
                     /product="cation channel sperm-associated protein 2
                     isoform X3"
                     /protein_id="XP_030105089.1"
                     /db_xref="GeneID:212670"
                     /db_xref="MGI:MGI:2387404"
                     /translation="MAQEQGHFQLLRADAIRSKLIDTFSLIEHLQGLSQAVPRHTLRE
                     ILDPSYQQKLMSGDQEQLVRFSIKPRRMGHITHSRRLLSRLRVRCSRMPPLSLWAGWV
                     LDSSVFSKFIISLIFLNTFVLMVEIELMESTNTALWPVKLALEVADWFILLSFIVEIL
                     LMWLASFSLFWKDAWNVFDFFVTLLSLLPELVVLLGVPAHSVWLQLLRVCRVLRSLKL
                     FARFRQIKVILLALVRALKSMTFLLMLLLIFFYIFAVTGVYFFREYSRSTIEGLEYNM
                     FFSGTSLGKVSEDIIETSDASDDDDDDDDDDDDDDDDDDKSDATESDGEKNENEESDS
                     ENSESENSESEKIDPEKDYAKKSYPEKSHPEKSYPEKSHPEKSYPEKSHPKKSYDEQA
                     EAEESKEKAYPVSHSISSHGSTAADTAFLENLDWETLVHENLPGLMDMDQDDRIVWPR
                     DSLFRYFELLEKLQYNLEERKKLQEFAVQALMSFEDK"
ORIGIN      
        1 cctctgcctc ctctctgaag gctttgggat gccagccttg tctgcagacc tggggacaca
       61 tacactgact cacctagata ctgaaagata gaccggaggg ggaggggatg ggagaaccct
      121 ccacatagga agtgctgcaa gaacgcggag ggcgtagtaa gtctacatcc tgccgctgcc
      181 ctacctcgta tcctgctttg tcaggtccac gtgagacatg gcacaagaac aaggacattt
      241 ccagctgctc agagctgatg ctatccgttc aaagctcatt gacactttct cgctcataga
      301 gcatttgcag ggcttgagcc aagccgtacc aaggcacact ctccgggaga tacttgatcc
      361 ttcttaccag cagaaactca tgtcaggaga tcaggagcag ctagtgcgct tctccataaa
      421 gcctcggcga atggggcaca tcacacactc gcggcggttg ctgagcaggc ttcgcgtgcg
      481 gtgcagtcga atgccccctc tttccttgtg ggctggatgg gtccttgata gttctgtctt
      541 ctcgaaattc atcatctccc tcatctttct gaacaccttt gtgctgatgg ttgaaataga
      601 attgatggaa tccacaaata ctgctctgtg gccagtgaag ctggctttgg aggtggcaga
      661 ttggttcatc ttgcttagct tcattgtaga gatacttcta atgtggttgg ccagtttttc
      721 tctcttctgg aaggatgcct ggaatgtctt tgactttttt gttaccttgt tgtctctgct
      781 tcctgagtta gtagtgctgt taggagtccc agcacactct gtgtggctcc agctgctgag
      841 ggtctgtcgg gtgctgaggt ctctcaaact gtttgcacga ttccgtcaaa ttaaagttat
      901 tcttttggct ctggtcaggg ccctgaagag catgacgttc ctcttgatgt tgctgcttat
      961 cttcttctac atttttgctg tgactggtgt ctacttcttc agagaatatt cccgatcaac
     1021 tatcgagggc ctggagtaca acatgttctt ctcagggacc agtcttggaa aggtctccga
     1081 agacataata gaaacttctg atgctagtga tgatgatgac gatgacgacg atgatgacga
     1141 cgacgatgat gatgatgatg acaaaagcga tgctactgaa agcgatggcg agaaaaacga
     1201 aaacgaggaa agcgatagtg agaatagtga gagtgagaat agcgagagcg agaaaattga
     1261 tcctgagaaa gactatgcca agaaaagcta tcctgagaaa agccatcctg agaaaagcta
     1321 tcctgagaaa agccatcctg agaaaagcta tcctgagaaa agccatccta agaaaagcta
     1381 tgatgaacaa gctgaagctg aagagtcaaa agaaaaagcc tacccagttt cccattcaat
     1441 ctcgtcccat ggctccactg cagccgatac tgctttcctt gaaaacctgg actgggagac
     1501 ccttgtgcat gagaacctgc ctgggctaat ggacatggat caggatgacc gcattgtctg
     1561 gcccagagac tcactcttcc gatatttcga gttactggaa aagcttcagt ataacctaga
     1621 agagcgcaag aagttacaag aatttgcagt ccaggccctg atgagttttg aagacaagtg
     1681 aaggtacagt gggtgacagc tgtgtccttg gacccagcaa aagctaatga agaaaataat
     1741 tggaatttaa aatataaata tctaataaat actgctaatg aatatttctg ttctacagcc
     1801 agccaacagt ctggatcaga gatggttgag agtgctcccg ggcactatta actgcaaata
     1861 catatcattc acgcccactt ctggacctaa aggttggagc gctcttcatc tcacttgtca
     1921 ttgaccaggg acgtttccat gtctgtttgt tccagtgttt atgagacctc agaaattatc
     1981 tatttcccat caaagcagag cccccttttt gtttgcgtat gctactggtg atgaacccca
     2041 tatcttcatg catcccacca ctgtgctata gcccccagca ggaagcccca tcctgaaggg
     2101 ttgactatga agctgatgct tagtggtgga ctatctgaat ggtatcccat tccattgttg
     2161 aaggactcga gcctcctttg gttgagtttt agtgatgggg tctttggttc tccctgaggc
     2221 tggcctcaga cttactgtgt agcgcaagct ggccctgaac tcctgctgca gcctcctgag
     2281 tcataggact gcatgccaag catattattt aattctttgg aaatgcttat tattaaaaat
     2341 tctatctttg accagtggca tgtgctttta atcccagcac tgaggaggca gaagcaggtg
     2401 ggtctctgtg tgtttgaaac ctgcctggtc tacaaagcaa gttccaggat ggccaggact
     2461 acacagagaa accccgtctt aaccttctgc tccccgaccc caaataattc tattaacctg
     2521 agctgaggag atggctcagt agtaaagtac acttgctgct cttatagagg acccaggttc
     2581 agttcccaga acccacatgg tgactcacaa ctgcctataa ccccagttcc agggattcaa
     2641 tgccttcttc tgctcttctc aggcatgtgg tacacagaaa tatgctcaca aaacatacat
     2701 gcacataaaa atcaataaat attttttaaa atgcttgata tatataagca tttttgtttg
     2761 tttgtttgtt tttgttttcc aagacagggt ttctctgtgt agccctggct gtcctgaaac
     2821 tcactctgta gttcaggctg gcctggaact cagaaatcca cctgcctctg cctcccaagt
     2881 gctaggatta aaggcgtgtg ccaccactgt ctggcatata tatataaaca tttatataat
     2941 atgcatgttc tataatatac tctatatttg aagtatgtat tatatgccat aaaataacca
     3001 ggtctgaaag ataacctccc atttttattt tttaattgaa aacttttttt ttccttttga
     3061 gacagagttt tactccatag cctggactag aacttactat gtagcccagg ctggctagct
     3121 ctgtggctag taagaccttg tcttaaaacc aaacaggacg gagagatggc ttggttgata
     3181 aagtgcttgt tgatcaatca tgaggatgaa agttcaggtc ccagaaccca cacagaagcc
     3241 agacatggca gcatgtctat gatcctagtt ctgagaggca gagacaggta aatcccaggg
     3301 gctcacttga tagccactct agccaaaact gagttccagt ttcaattaca gtccctgtct
     3361 caaaaaagga tgaagtggag agtgatagag gaaggcgttg gatattgacg tgtgtagggg
     3421 tgtatgcctg tgcatatgta catatgtatg cctgtacaca tatgagcacg catgcattca
     3481 ccactcccac tcaccccaca cataaaggaa gcaagtacca aaaaggaaga tagaacactg
     3541 aactatatac tttaaaatat ctcatgttgg gctggagaga tggctcagtg gttaagagca
     3601 ctgactcttc ttccagaggt cctgagttca attcccagaa accacatggt ggctcacaaa
     3661 caactgtaat ggaagctgat gccttcttcc ggtgtgtctg aagagagcaa tggtgtattc
     3721 ataaaataaa tacaatcttt ttttgtt
//
