LOCUS       XM_030249227            3885 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus cation channel, sperm associated 2
            (Catsper2), transcript variant X4, mRNA.
ACCESSION   XM_030249227
VERSION     XM_030249227.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030249227.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3885
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..3885
                     /gene="Catsper2"
                     /note="cation channel, sperm associated 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 66 long SRA reads, and 91% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     8 samples with support for all annotated introns"
                     /db_xref="GeneID:212670"
                     /db_xref="MGI:MGI:2387404"
     CDS             356..1819
                     /gene="Catsper2"
                     /codon_start=1
                     /product="cation channel sperm-associated protein 2
                     isoform X3"
                     /protein_id="XP_030105087.1"
                     /db_xref="GeneID:212670"
                     /db_xref="MGI:MGI:2387404"
                     /translation="MAQEQGHFQLLRADAIRSKLIDTFSLIEHLQGLSQAVPRHTLRE
                     ILDPSYQQKLMSGDQEQLVRFSIKPRRMGHITHSRRLLSRLRVRCSRMPPLSLWAGWV
                     LDSSVFSKFIISLIFLNTFVLMVEIELMESTNTALWPVKLALEVADWFILLSFIVEIL
                     LMWLASFSLFWKDAWNVFDFFVTLLSLLPELVVLLGVPAHSVWLQLLRVCRVLRSLKL
                     FARFRQIKVILLALVRALKSMTFLLMLLLIFFYIFAVTGVYFFREYSRSTIEGLEYNM
                     FFSGTSLGKVSEDIIETSDASDDDDDDDDDDDDDDDDDDKSDATESDGEKNENEESDS
                     ENSESENSESEKIDPEKDYAKKSYPEKSHPEKSYPEKSHPEKSYPEKSHPKKSYDEQA
                     EAEESKEKAYPVSHSISSHGSTAADTAFLENLDWETLVHENLPGLMDMDQDDRIVWPR
                     DSLFRYFELLEKLQYNLEERKKLQEFAVQALMSFEDK"
ORIGIN      
        1 ttccaacaca tcggaggcgg cggcgagacg ggccgaggcg agcagcagcg ccacgcccgg
       61 gagcagagct aggcagctga agcgcatggc ggcgggtcgc ggtcggaggg ccgggaccgg
      121 agaaatgaga tgggagagcc cgcaatctgc agccgcttgc ctgcgctcgc gcgtctggcc
      181 cgggcagacc cgctgccgag gtcccaaccc cctaggcctg ctcggggccc gcagtgtggc
      241 agccgccgat tggctgcgtc acgcagcgtc gggcgggcgg aacagctggg cgtagtaagt
      301 ctacatcctg ccgctgccct acctcgtatc ctgctttgtc aggtccacgt gagacatggc
      361 acaagaacaa ggacatttcc agctgctcag agctgatgct atccgttcaa agctcattga
      421 cactttctcg ctcatagagc atttgcaggg cttgagccaa gccgtaccaa ggcacactct
      481 ccgggagata cttgatcctt cttaccagca gaaactcatg tcaggagatc aggagcagct
      541 agtgcgcttc tccataaagc ctcggcgaat ggggcacatc acacactcgc ggcggttgct
      601 gagcaggctt cgcgtgcggt gcagtcgaat gccccctctt tccttgtggg ctggatgggt
      661 ccttgatagt tctgtcttct cgaaattcat catctccctc atctttctga acacctttgt
      721 gctgatggtt gaaatagaat tgatggaatc cacaaatact gctctgtggc cagtgaagct
      781 ggctttggag gtggcagatt ggttcatctt gcttagcttc attgtagaga tacttctaat
      841 gtggttggcc agtttttctc tcttctggaa ggatgcctgg aatgtctttg acttttttgt
      901 taccttgttg tctctgcttc ctgagttagt agtgctgtta ggagtcccag cacactctgt
      961 gtggctccag ctgctgaggg tctgtcgggt gctgaggtct ctcaaactgt ttgcacgatt
     1021 ccgtcaaatt aaagttattc ttttggctct ggtcagggcc ctgaagagca tgacgttcct
     1081 cttgatgttg ctgcttatct tcttctacat ttttgctgtg actggtgtct acttcttcag
     1141 agaatattcc cgatcaacta tcgagggcct ggagtacaac atgttcttct cagggaccag
     1201 tcttggaaag gtctccgaag acataataga aacttctgat gctagtgatg atgatgacga
     1261 tgacgacgat gatgacgacg acgatgatga tgatgatgac aaaagcgatg ctactgaaag
     1321 cgatggcgag aaaaacgaaa acgaggaaag cgatagtgag aatagtgaga gtgagaatag
     1381 cgagagcgag aaaattgatc ctgagaaaga ctatgccaag aaaagctatc ctgagaaaag
     1441 ccatcctgag aaaagctatc ctgagaaaag ccatcctgag aaaagctatc ctgagaaaag
     1501 ccatcctaag aaaagctatg atgaacaagc tgaagctgaa gagtcaaaag aaaaagccta
     1561 cccagtttcc cattcaatct cgtcccatgg ctccactgca gccgatactg ctttccttga
     1621 aaacctggac tgggagaccc ttgtgcatga gaacctgcct gggctaatgg acatggatca
     1681 ggatgaccgc attgtctggc ccagagactc actcttccga tatttcgagt tactggaaaa
     1741 gcttcagtat aacctagaag agcgcaagaa gttacaagaa tttgcagtcc aggccctgat
     1801 gagttttgaa gacaagtgaa ggtacagtgg gtgacagctg tgtccttgga cccagcaaaa
     1861 gctaatgaag aaaataattg gaatttaaaa tataaatatc taataaatac tgctaatgaa
     1921 tatttctgtt ctacagccag ccaacagtct ggatcagaga tggttgagag tgctcccggg
     1981 cactattaac tgcaaataca tatcattcac gcccacttct ggacctaaag gttggagcgc
     2041 tcttcatctc acttgtcatt gaccagggac gtttccatgt ctgtttgttc cagtgtttat
     2101 gagacctcag aaattatcta tttcccatca aagcagagcc ccctttttgt ttgcgtatgc
     2161 tactggtgat gaaccccata tcttcatgca tcccaccact gtgctatagc ccccagcagg
     2221 aagccccatc ctgaagggtt gactatgaag ctgatgctta gtggtggact atctgaatgg
     2281 tatcccattc cattgttgaa ggactcgagc ctcctttggt tgagttttag tgatggggtc
     2341 tttggttctc cctgaggctg gcctcagact tactgtgtag cgcaagctgg ccctgaactc
     2401 ctgctgcagc ctcctgagtc ataggactgc atgccaagca tattatttaa ttctttggaa
     2461 atgcttatta ttaaaaattc tatctttgac cagtggcatg tgcttttaat cccagcactg
     2521 aggaggcaga agcaggtggg tctctgtgtg tttgaaacct gcctggtcta caaagcaagt
     2581 tccaggatgg ccaggactac acagagaaac cccgtcttaa ccttctgctc cccgacccca
     2641 aataattcta ttaacctgag ctgaggagat ggctcagtag taaagtacac ttgctgctct
     2701 tatagaggac ccaggttcag ttcccagaac ccacatggtg actcacaact gcctataacc
     2761 ccagttccag ggattcaatg ccttcttctg ctcttctcag gcatgtggta cacagaaata
     2821 tgctcacaaa acatacatgc acataaaaat caataaatat tttttaaaat gcttgatata
     2881 tataagcatt tttgtttgtt tgtttgtttt tgttttccaa gacagggttt ctctgtgtag
     2941 ccctggctgt cctgaaactc actctgtagt tcaggctggc ctggaactca gaaatccacc
     3001 tgcctctgcc tcccaagtgc taggattaaa ggcgtgtgcc accactgtct ggcatatata
     3061 tataaacatt tatataatat gcatgttcta taatatactc tatatttgaa gtatgtatta
     3121 tatgccataa aataaccagg tctgaaagat aacctcccat ttttattttt taattgaaaa
     3181 cttttttttt ccttttgaga cagagtttta ctccatagcc tggactagaa cttactatgt
     3241 agcccaggct ggctagctct gtggctagta agaccttgtc ttaaaaccaa acaggacgga
     3301 gagatggctt ggttgataaa gtgcttgttg atcaatcatg aggatgaaag ttcaggtccc
     3361 agaacccaca cagaagccag acatggcagc atgtctatga tcctagttct gagaggcaga
     3421 gacaggtaaa tcccaggggc tcacttgata gccactctag ccaaaactga gttccagttt
     3481 caattacagt ccctgtctca aaaaaggatg aagtggagag tgatagagga aggcgttgga
     3541 tattgacgtg tgtaggggtg tatgcctgtg catatgtaca tatgtatgcc tgtacacata
     3601 tgagcacgca tgcattcacc actcccactc accccacaca taaaggaagc aagtaccaaa
     3661 aaggaagata gaacactgaa ctatatactt taaaatatct catgttgggc tggagagatg
     3721 gctcagtggt taagagcact gactcttctt ccagaggtcc tgagttcaat tcccagaaac
     3781 cacatggtgg ctcacaaaca actgtaatgg aagctgatgc cttcttccgg tgtgtctgaa
     3841 gagagcaatg gtgtattcat aaaataaata caatcttttt ttgtt
//
