LOCUS       XM_011239414            1472 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus cation channel, sperm associated 2
            (Catsper2), transcript variant X6, mRNA.
ACCESSION   XM_011239414
VERSION     XM_011239414.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011239414.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..1472
                     /gene="Catsper2"
                     /note="cation channel, sperm associated 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 18 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:212670"
                     /db_xref="MGI:MGI:2387404"
     CDS             217..1359
                     /gene="Catsper2"
                     /codon_start=1
                     /product="cation channel sperm-associated protein 2
                     isoform X4"
                     /protein_id="XP_011237716.1"
                     /db_xref="GeneID:212670"
                     /db_xref="MGI:MGI:2387404"
                     /translation="MAQEQGHFQLLRADAIRSKLIDTFSLIEHLQGLSQAVPRHTLRE
                     ILDPSYQQKLMSGDQEQLVRFSIKPRRMGHITHSRRLLSRLRVRCSRMPPLSLWAGWV
                     LDSSVFSKFIISLIFLNTFVLMVEIELMESTNTALWPVKLALEVADWFILLSFIVEIL
                     LMWLASFSLFWKDAWNVFDFFVTLLSLLPELVVLLGVPAHSVWLQLLRVCRVLRSLKL
                     FARFRQIKVILLALVRALKSMTFLLMLLLIFFYIFAVTGVYFFREYSRSTIEGLEYNM
                     FFSDLLNSLVTVFILFTLDHWYAVLQDIWKVPESSRVFSSIYVILWLLLGSIIFRNII
                     VAMMVTNFQNIRSELSEEMSHLEVQYKADMFKQQIIQRRQHSESLR"
ORIGIN      
        1 gtgggcggaa gtgaggcccg cgaaagggct ggaggggagc ttgagctgtc tgtccggctc
       61 cctccctccg gggcattggg gcgcgcacgc acttgagcgc accgcgacac gttttccaaa
      121 tgtcaggctg ttgctttgtc caattatagg gcgtagtaag tctacatcct gccgctgccc
      181 tacctcgtat cctgctttgt caggtccacg tgagacatgg cacaagaaca aggacatttc
      241 cagctgctca gagctgatgc tatccgttca aagctcattg acactttctc gctcatagag
      301 catttgcagg gcttgagcca agccgtacca aggcacactc tccgggagat acttgatcct
      361 tcttaccagc agaaactcat gtcaggagat caggagcagc tagtgcgctt ctccataaag
      421 cctcggcgaa tggggcacat cacacactcg cggcggttgc tgagcaggct tcgcgtgcgg
      481 tgcagtcgaa tgccccctct ttccttgtgg gctggatggg tccttgatag ttctgtcttc
      541 tcgaaattca tcatctccct catctttctg aacacctttg tgctgatggt tgaaatagaa
      601 ttgatggaat ccacaaatac tgctctgtgg ccagtgaagc tggctttgga ggtggcagat
      661 tggttcatct tgcttagctt cattgtagag atacttctaa tgtggttggc cagtttttct
      721 ctcttctgga aggatgcctg gaatgtcttt gacttttttg ttaccttgtt gtctctgctt
      781 cctgagttag tagtgctgtt aggagtccca gcacactctg tgtggctcca gctgctgagg
      841 gtctgtcggg tgctgaggtc tctcaaactg tttgcacgat tccgtcaaat taaagttatt
      901 cttttggctc tggtcagggc cctgaagagc atgacgttcc tcttgatgtt gctgcttatc
      961 ttcttctaca tttttgctgt gactggtgtc tacttcttca gagaatattc ccgatcaact
     1021 atcgagggcc tggagtacaa catgttcttc tcggacctac taaattcact ggtgacagtg
     1081 ttcatcctct tcaccttgga tcattggtat gcagtacttc aggatatctg gaaggtgcca
     1141 gaatctagcc gtgtctttag cagcatctat gttatccttt ggttgctgct tggctccata
     1201 atctttcgaa atatcatagt agccatgatg gttactaact ttcagaatat cagaagtgag
     1261 ctgagtgagg agatgagcca cctggaggtt cagtataaag ctgacatgtt caagcaacag
     1321 attatccaga ggagacagca ctctgaatca ctaaggtaaa gtagtgatag caacatggat
     1381 gacaggagaa tgagagggac cagtcttgga aaggtctccg aagacataat agaaacttct
     1441 gatgctagtg atgatgatga cgatgacgac ga
//
