LOCUS       XM_006499084            3292 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus cation channel, sperm associated 2
            (Catsper2), transcript variant X7, mRNA.
ACCESSION   XM_006499084
VERSION     XM_006499084.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006499084.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..3292
                     /gene="Catsper2"
                     /note="cation channel, sperm associated 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 64 long SRA reads, and 90% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     7 samples with support for all annotated introns"
                     /db_xref="GeneID:212670"
                     /db_xref="MGI:MGI:2387404"
     CDS             93..1226
                     /gene="Catsper2"
                     /codon_start=1
                     /product="cation channel sperm-associated protein 2
                     isoform X5"
                     /protein_id="XP_006499147.1"
                     /db_xref="GeneID:212670"
                     /db_xref="MGI:MGI:2387404"
                     /translation="MAQEQGHFQLLRADAIRSKLIDTFSLIEHLQGLSQAVPRHTLRE
                     ILDPSYQQKLMSGDQEQLVRFSIKPRRMGHITHSRRLLSRLRVRCSRMPPLSLWAGWV
                     LDSSVFSKFIISLIFLNTFVLMVEIVTNFQNIRSELSEEMSHLEVQYKADMFKQQIIQ
                     RRQHSESLRGTSLGKVSEDIIETSDASDDDDDDDDDDDDDDDDDDKSDATESDGEKNE
                     NEESDSENSESENSESEKIDPEKDYAKKSYPEKSHPEKSYPEKSHPEKSYPEKSHPKK
                     SYDEQAEAEESKEKAYPVSHSISSHGSTAADTAFLENLDWETLVHENLPGLMDMDQDD
                     RIVWPRDSLFRYFELLEKLQYNLEERKKLQEFAVQALMSFEDK"
ORIGIN      
        1 aggctgttgc tttgtccaat tatagggcgt agtaagtcta catcctgccg ctgccctacc
       61 tcgtatcctg ctttgtcagg tccacgtgag acatggcaca agaacaagga catttccagc
      121 tgctcagagc tgatgctatc cgttcaaagc tcattgacac tttctcgctc atagagcatt
      181 tgcagggctt gagccaagcc gtaccaaggc acactctccg ggagatactt gatccttctt
      241 accagcagaa actcatgtca ggagatcagg agcagctagt gcgcttctcc ataaagcctc
      301 ggcgaatggg gcacatcaca cactcgcggc ggttgctgag caggcttcgc gtgcggtgca
      361 gtcgaatgcc ccctctttcc ttgtgggctg gatgggtcct tgatagttct gtcttctcga
      421 aattcatcat ctccctcatc tttctgaaca cctttgtgct gatggttgaa atagttacta
      481 actttcagaa tatcagaagt gagctgagtg aggagatgag ccacctggag gttcagtata
      541 aagctgacat gttcaagcaa cagattatcc agaggagaca gcactctgaa tcactaagag
      601 ggaccagtct tggaaaggtc tccgaagaca taatagaaac ttctgatgct agtgatgatg
      661 atgacgatga cgacgatgat gacgacgacg atgatgatga tgatgacaaa agcgatgcta
      721 ctgaaagcga tggcgagaaa aacgaaaacg aggaaagcga tagtgagaat agtgagagtg
      781 agaatagcga gagcgagaaa attgatcctg agaaagacta tgccaagaaa agctatcctg
      841 agaaaagcca tcctgagaaa agctatcctg agaaaagcca tcctgagaaa agctatcctg
      901 agaaaagcca tcctaagaaa agctatgatg aacaagctga agctgaagag tcaaaagaaa
      961 aagcctaccc agtttcccat tcaatctcgt cccatggctc cactgcagcc gatactgctt
     1021 tccttgaaaa cctggactgg gagacccttg tgcatgagaa cctgcctggg ctaatggaca
     1081 tggatcagga tgaccgcatt gtctggccca gagactcact cttccgatat ttcgagttac
     1141 tggaaaagct tcagtataac ctagaagagc gcaagaagtt acaagaattt gcagtccagg
     1201 ccctgatgag ttttgaagac aagtgaaggt acagtgggtg acagctgtgt ccttggaccc
     1261 agcaaaagct aatgaagaaa ataattggaa tttaaaatat aaatatctaa taaatactgc
     1321 taatgaatat ttctgttcta cagccagcca acagtctgga tcagagatgg ttgagagtgc
     1381 tcccgggcac tattaactgc aaatacatat cattcacgcc cacttctgga cctaaaggtt
     1441 ggagcgctct tcatctcact tgtcattgac cagggacgtt tccatgtctg tttgttccag
     1501 tgtttatgag acctcagaaa ttatctattt cccatcaaag cagagccccc tttttgtttg
     1561 cgtatgctac tggtgatgaa ccccatatct tcatgcatcc caccactgtg ctatagcccc
     1621 cagcaggaag ccccatcctg aagggttgac tatgaagctg atgcttagtg gtggactatc
     1681 tgaatggtat cccattccat tgttgaagga ctcgagcctc ctttggttga gttttagtga
     1741 tggggtcttt ggttctccct gaggctggcc tcagacttac tgtgtagcgc aagctggccc
     1801 tgaactcctg ctgcagcctc ctgagtcata ggactgcatg ccaagcatat tatttaattc
     1861 tttggaaatg cttattatta aaaattctat ctttgaccag tggcatgtgc ttttaatccc
     1921 agcactgagg aggcagaagc aggtgggtct ctgtgtgttt gaaacctgcc tggtctacaa
     1981 agcaagttcc aggatggcca ggactacaca gagaaacccc gtcttaacct tctgctcccc
     2041 gaccccaaat aattctatta acctgagctg aggagatggc tcagtagtaa agtacacttg
     2101 ctgctcttat agaggaccca ggttcagttc ccagaaccca catggtgact cacaactgcc
     2161 tataacccca gttccaggga ttcaatgcct tcttctgctc ttctcaggca tgtggtacac
     2221 agaaatatgc tcacaaaaca tacatgcaca taaaaatcaa taaatatttt ttaaaatgct
     2281 tgatatatat aagcattttt gtttgtttgt ttgtttttgt tttccaagac agggtttctc
     2341 tgtgtagccc tggctgtcct gaaactcact ctgtagttca ggctggcctg gaactcagaa
     2401 atccacctgc ctctgcctcc caagtgctag gattaaaggc gtgtgccacc actgtctggc
     2461 atatatatat aaacatttat ataatatgca tgttctataa tatactctat atttgaagta
     2521 tgtattatat gccataaaat aaccaggtct gaaagataac ctcccatttt tattttttaa
     2581 ttgaaaactt tttttttcct tttgagacag agttttactc catagcctgg actagaactt
     2641 actatgtagc ccaggctggc tagctctgtg gctagtaaga ccttgtctta aaaccaaaca
     2701 ggacggagag atggcttggt tgataaagtg cttgttgatc aatcatgagg atgaaagttc
     2761 aggtcccaga acccacacag aagccagaca tggcagcatg tctatgatcc tagttctgag
     2821 aggcagagac aggtaaatcc caggggctca cttgatagcc actctagcca aaactgagtt
     2881 ccagtttcaa ttacagtccc tgtctcaaaa aaggatgaag tggagagtga tagaggaagg
     2941 cgttggatat tgacgtgtgt aggggtgtat gcctgtgcat atgtacatat gtatgcctgt
     3001 acacatatga gcacgcatgc attcaccact cccactcacc ccacacataa aggaagcaag
     3061 taccaaaaag gaagatagaa cactgaacta tatactttaa aatatctcat gttgggctgg
     3121 agagatggct cagtggttaa gagcactgac tcttcttcca gaggtcctga gttcaattcc
     3181 cagaaaccac atggtggctc acaaacaact gtaatggaag ctgatgcctt cttccggtgt
     3241 gtctgaagag agcaatggtg tattcataaa ataaatacaa tctttttttg tt
//
