LOCUS       XM_006531708            2022 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus cation channel, sperm associated 1
            (Catsper1), transcript variant X1, mRNA.
ACCESSION   XM_006531708
VERSION     XM_006531708.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000085.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006531708.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="19"
     gene            1..2022
                     /gene="Catsper1"
                     /gene_synonym="Catsper; KSper"
                     /note="cation channel, sperm associated 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, 6 long SRA reads, 5 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:225865"
                     /db_xref="MGI:MGI:2179947"
     CDS             71..1894
                     /gene="Catsper1"
                     /gene_synonym="Catsper; KSper"
                     /codon_start=1
                     /product="cation channel sperm-associated protein 1
                     isoform X1"
                     /protein_id="XP_006531771.1"
                     /db_xref="GeneID:225865"
                     /db_xref="MGI:MGI:2179947"
                     /translation="MGCSNNHTNSMDRAGVSTLPNNISHAYGGSHPLAESQHSGGPQS
                     GPRIDPNHHPHQDDPHRPSEPLSHPSSTGSHQGTTHQQYHERSHHLNPQQNRDHADTI
                     SYRSSTRFYRSHAPFSRQERPHLHADHHHEGHHAHSHHGEHPHHKEQRHYHGDHMHHH
                     IHHRSPSASQLSHKSHSTLATSPSHVGSKSTASGARYTFGARSQIFGKAQSRESLRES
                     ASLSEGEDHVQKRKKAQRAHKKAHTGNIFQLLWEKISHLLLGLQQMILSLTQSLGFET
                     FIFIVVCLNTVILVAQTFTELEIRGEWYFMVLDSIFLSIYVLEAVLKLIALGLEYFYD
                     PWNNLDFFIMVMAVLDFVLLQINSLSYSFYNHSLFRILKVFKSMRALRAIRVLRRLSI
                     LTSLHEVAGTLSGSLPSITAILTLMFTCLFLFSVVLRALFQDSDPKRFQNIFTTLFTL
                     FTMLTLDDWSLIYIDNRAQGAWYIIPILMIYIVIQYFIFLNLVIAVLVDNFQMALLKG
                     LEKVKLEQAARVHEKLLDDSLTDLNKADANAQMTEEALKMQLIEGMFGNMTVKQRVLH
                     FQFLQLVAAVEQHQQKFRSQAYVIDELVDMAFEAGDDDYGK"
ORIGIN      
        1 ccccaccccc acccccaccc caccctgcat aggccaaacc aaggtggcgt ctattacgat
       61 tctcctcagc atgggatgtt ccaacaacca taccaacagc atggacaggg ctggtgtctc
      121 taccttacct aataacatct ctcacgctta tggtggatcg cacccccttg ctgagtccca
      181 gcactctggt ggaccccaga gtggacctcg tattgacccg aatcatcatc cccaccaaga
      241 tgacccccat agacccagtg aacctttgtc ccacccctcc tctactggca gccaccaagg
      301 gacaacccat caacaatacc atgagaggtc tcaccatctt aacccccagc agaacagaga
      361 tcatgcagac accatttcct atcgctccag tacgcggttc tatcgctccc atgcgccgtt
      421 cagtcgccag gaaagacctc atctccacgc tgatcaccat catgagggcc atcatgccca
      481 ttctcaccat ggtgaacatc cccaccacaa ggagcaacgg cactatcacg gagatcatat
      541 gcatcaccat atccatcatc gctccccaag tgcctcccaa ctctcacaca agtctcacag
      601 cacacttgcc acctctccat ctcatgtggg atcgaaaagc acagccagtg gggctcggta
      661 cacctttgga gctcgctctc aaattttcgg caaagctcag tccagggaga gcttgagaga
      721 atcagcctct ttgagtgaag gggaggatca cgttcagaaa cgcaaaaagg cccagagggc
      781 ccacaagaag gcacacaccg ggaatatctt ccaattgcta tgggaaaaaa taagccatct
      841 ccttttgggt cttcagcaaa tgatattgtc actgacccag tccctgggct ttgagacctt
      901 tatcttcatc gtggtctgcc tcaacacagt catccttgtg gcccagactt tcactgagct
      961 agagatccga ggtgaatggt acttcatggt cttggactcc atcttcctct ccatctatgt
     1021 actagaagca gtcctcaagc taattgccct gggcctggag tatttttatg acccatggaa
     1081 caacctggac ttcttcatca tggtcatggc agtgctggac tttgtgctcc ttcagataaa
     1141 ctcgctctca tattcattct acaaccacag cctgttccgg attctcaaag tcttcaaaag
     1201 tatgcgggcc ctgagggcca tccgggttct tcggaggctc agcatcctga ccagcctcca
     1261 cgaagtggcc gggactctga gtggatcttt accatccatc acggccatcc tcaccctcat
     1321 gtttacctgc ctcttcctct tctctgtggt tctccgagca ctgtttcagg actcagaccc
     1381 caagcgcttc cagaacatct ttaccacact cttcaccctg ttcaccatgc tcaccctgga
     1441 cgactggtcc ctcatctaca tagacaacag ggcccaaggc gcctggtaca tcataccgat
     1501 cctcatgatt tacattgtca tccagtactt catcttcctc aacctggtga ttgctgtcct
     1561 ggtagataac ttccagatgg cgttgctcaa aggcctagag aaagtgaagc tggagcaagc
     1621 tgcccgggtc catgagaagt tgttggatga ctctctgaca gatctcaaca aagcagacgc
     1681 caatgcacaa atgaccgagg aggccttgaa gatgcagctt attgagggaa tgtttggcaa
     1741 catgacagtg aagcagcggg tgctccactt ccagttcctg cagttggtgg cagcggtaga
     1801 acagcatcaa cagaagtttc gttcccaagc gtacgtcatc gatgagcttg tggacatggc
     1861 atttgaggct ggagacgacg actacgggaa gtgaccctga agaatactaa cctgagtttc
     1921 tggcaagcta cctacctcgg tgggttggga catggcccta atgctgctgg tattatccag
     1981 aaccatgttg gactgaggtc ccaatagagt ttttaaaacc cc
//
