LOCUS       XM_011238521            1916 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ciliogenesis associated TTC17 interacting
            protein (Catip), transcript variant X1, mRNA.
ACCESSION   XM_011238521
VERSION     XM_011238521.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..1916
                     /gene="Catip"
                     /gene_synonym="Gm216"
                     /note="ciliogenesis associated TTC17 interacting protein;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 16 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     6 samples with support for all annotated introns"
                     /db_xref="GeneID:241112"
                     /db_xref="MGI:MGI:2685062"
     CDS             11..1666
                     /gene="Catip"
                     /gene_synonym="Gm216"
                     /codon_start=1
                     /product="ciliogenesis-associated TTC17-interacting
                     protein isoform X1"
                     /protein_id="XP_011236823.1"
                     /db_xref="GeneID:241112"
                     /db_xref="MGI:MGI:2685062"
                     /translation="METTSHRLTSLNKMSSKVSPTVSKAKDQHHLGQLQQQQQQRQQQ
                     QPFPEANAEAISFLNSFCEPDGGAGVGRRGLEDMLLFFPETLAILSDTGEPQGELTIE
                     VQRGKYKDDIGILTHCLLVHASSRGFLDKSLCGSSLLGYLNNNLELMEQHSQEFIKFP
                     VLPMERKMSVLKQDGQFVVTRSVKEGEGFVSSAANVVLLRVMAWQQSVPSGARFLALD
                     SEGKLCHCTYKSLGFQTIQVGNQQAKMFIVEQTIHSEEGIPFSCQYYLLPDGHLAKRV
                     QVGSPGCCIITKMPLIREEDVIESPPTFDKKPLVWGEDLELYSKFLDRKEQLRLSHAS
                     YLRHHPEAQALVSDFLLFLLLRRPEDVVTFAAEHFRPFAALRSPIPALRSSHQPSPFR
                     TLENEEEEEAKEEEEKEEEEEEEEEIAGEIEGEEEEEEIEEGDDYLYMDEDEDIEDYT
                     YYENYYYNYDEEVDSYDDVNNYDDDDIANVDDNDDIDNYDDDNDDDDDDDDNDDEDDV
                     DDNDDDDVDKVRAKVDNLSVDNDDNDVVNSDNVDVDNDNNNQG"
ORIGIN      
        1 tctggttgcc atggagacta ctagtcacag actgactagc ctcaataaaa tgtcttccaa
       61 agtttccccc actgtttcca aagccaagga ccagcatcac ttaggccagc tgcagcaaca
      121 gcagcagcag cggcagcagc agcagccatt cccagaagcc aatgctgaag ccatcagctt
      181 tctcaactcc ttctgtgagc cagatggtgg ggcaggcgtg gggaggagag ggctggagga
      241 tatgctcctg ttcttcccgg agactctggc catcctctca gacacagggg aacctcaggg
      301 agaactgacc attgaggtgc agagggggaa gtacaaggac gacataggga tcctgaccca
      361 ctgtctactg gtccacgcct ctagccgcgg cttcctagac aaatcgctgt gtgggagctc
      421 cctcctaggc tacctaaaca acaatctgga gctgatggaa cagcacagtc aggagttcat
      481 caagttccct gtccttccca tggagaggaa gatgagcgtc ctgaagcagg atggccagtt
      541 tgttgtgacc agaagtgtca aggagggtga gggctttgtc tccagtgcag ccaatgtggt
      601 gctgctgaga gtgatggcct ggcagcagtc ggtgcccagt ggggctcgct tcctagcctt
      661 agactcggag ggcaagctct gccattgcac ctacaaatcc ctgggtttcc agacaatcca
      721 agtgggcaac cagcaggcta aaatgttcat cgtggagcaa accatacact ctgaagaggg
      781 catccccttc tcctgccagt actacttgct ccctgatggg cacctggcta agagagtcca
      841 ggtgggctct ccaggatgtt gtatcatcac caagatgccc ctcataagag aggaggatgt
      901 gatcgagtct ccgcccacgt ttgataagaa gcccctggtg tggggggaag acttggagct
      961 ttactcgaaa ttcctggacc ggaaggagca gctgcgcctc agccacgcga gttatctgcg
     1021 gcatcacccc gaggcccaag ccctagtctc cgacttcctg ctgttcctgc tgctccgccg
     1081 gccagaggac gtggtcactt tcgctgccga gcacttcagg ccctttgcag cgctgcgctc
     1141 gcctatccca gccctgcgat cctcacacca gcccagccct ttccgcactc tggagaatga
     1201 ggaagaagag gaggcgaagg aggaggagga gaaagaggaa gaggaggaag aggaggagga
     1261 aatagcgggg gagatagagg gggaggaaga agaagaggag atagaagagg gtgatgacta
     1321 cttgtacatg gacgaggatg aagacatcga ggactacacc tactatgaga attactatta
     1381 caactacgat gaagaagttg acagttacga tgatgtcaac aactacgatg atgacgacat
     1441 tgccaatgtt gacgacaatg acgatattga caattacgat gatgacaacg acgatgacga
     1501 tgatgacgac gacaacgatg acgaagatga tgttgacgac aatgatgacg atgatgtcga
     1561 caaagtccga gccaaagtcg acaacctcag tgtcgacaat gatgacaacg atgttgtcaa
     1621 cagtgacaac gttgatgtcg acaatgacaa caacaaccag ggttagactc tcgaaaaaga
     1681 ctaggtgggc ggctagaatc cggagactgg gcctggctgg ggctgcggct tcagtgggag
     1741 ataagcaggg tcctttccca gttctactct gtcagaaggg actgcatttg gccagctctt
     1801 cttgtcaaaa aagggaagct ttattttcgt ttacccagca agtttcatgt tttcttccta
     1861 gagtctattt tcatagttat ggccatttca gagaaaataa aattaaggcc tgtggc
//
