LOCUS       NM_025821               2849 bp    mRNA    linear   ROD 24-DEC-2024
DEFINITION  Mus musculus calcium regulated heat stable protein 1 (Carhsp1),
            mRNA.
ACCESSION   NM_025821
VERSION     NM_025821.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Miller,J.A., Nathanson,J., Franjic,D., Shim,S., Dalley,R.A.,
            Shapouri,S., Smith,K.A., Sunkin,S.M., Bernard,A., Bennett,J.L.,
            Lee,C.K., Hawrylycz,M.J., Jones,A.R., Amaral,D.G., Sestan,N.,
            Gage,F.H. and Lein,E.S.
  TITLE     Conserved molecular signatures of neurogenesis in the hippocampal
            subgranular zone of rodents and primates
  JOURNAL   Development 140 (22), 4633-4644 (2013)
   PUBMED   24154525
REFERENCE   3  (bases 1 to 2849)
  AUTHORS   Nakahara,M., Tateyama,H., Araki,M., Nakagata,N., Yamamura,K. and
            Araki,K.
  TITLE     Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from
            MSM/Ms mice
  JOURNAL   Mamm Genome 24 (5-6), 228-239 (2013)
   PUBMED   23604909
REFERENCE   4  (bases 1 to 2849)
  AUTHORS   Pfeiffer,J.R., McAvoy,B.L., Fecteau,R.E., Deleault,K.M. and
            Brooks,S.A.
  TITLE     CARHSP1 is required for effective tumor necrosis factor alpha mRNA
            stabilization and localizes to processing bodies and exosomes
  JOURNAL   Mol Cell Biol 31 (2), 277-286 (2011)
   PUBMED   21078874
REFERENCE   5  (bases 1 to 2849)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   6  (bases 1 to 2849)
  AUTHORS   Taniwaki,T., Haruna,K., Nakamura,H., Sekimoto,T., Oike,Y.,
            Imaizumi,T., Saito,F., Muta,M., Soejima,Y., Utoh,A., Nakagata,N.,
            Araki,M., Yamamura,K. and Araki,K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   7  (bases 1 to 2849)
  AUTHORS   Baguet,A., Epler,J., Wen,K.W. and Bix,M.
  TITLE     A Leishmania major response locus identified by interval-specific
            congenic mapping of a T helper type 2 cell bias-controlling
            quantitative trait locus
  JOURNAL   J Exp Med 200 (12), 1605-1612 (2004)
   PUBMED   15596523
REFERENCE   8  (bases 1 to 2849)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   9  (bases 1 to 2849)
  AUTHORS   Wishart,M.J. and Dixon,J.E.
  TITLE     The archetype STYX/dead-phosphatase complexes with a spermatid
            mRNA-binding protein and is essential for normal sperm production
  JOURNAL   Proc Natl Acad Sci U S A 99 (4), 2112-2117 (2002)
   PUBMED   11842224
REFERENCE   10 (bases 1 to 2849)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK004711.2.
            
            On Dec 18, 2002 this sequence version replaced NM_025821.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK004711.2, AK143612.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN02415126, SAMN02415131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 4.26 cM"
     gene            1..2849
                     /gene="Carhsp1"
                     /gene_synonym="1200011K09Rik; Crhsp-24; D16Ertd465e"
                     /note="calcium regulated heat stable protein 1"
                     /db_xref="GeneID:52502"
                     /db_xref="MGI:MGI:1196368"
     exon            1..41
                     /gene="Carhsp1"
                     /gene_synonym="1200011K09Rik; Crhsp-24; D16Ertd465e"
                     /inference="alignment:Splign:2.1.0"
     exon            42..209
                     /gene="Carhsp1"
                     /gene_synonym="1200011K09Rik; Crhsp-24; D16Ertd465e"
                     /inference="alignment:Splign:2.1.0"
     CDS             49..495
                     /gene="Carhsp1"
                     /gene_synonym="1200011K09Rik; Crhsp-24; D16Ertd465e"
                     /note="calcineurin substrate CRHSP-24; calcium-regulated
                     heat-stable protein of 24 kDa"
                     /codon_start=1
                     /product="calcium-regulated heat stable protein 1"
                     /protein_id="NP_080097.1"
                     /db_xref="CCDS:CCDS27942.1"
                     /db_xref="GeneID:52502"
                     /db_xref="MGI:MGI:1196368"
                     /translation="MSSEPPPPPLQPPTHQTSVGLLDTPRTRDRSPSPLRGNVVPSPL
                     PTRRTRTFSATVRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVP
                     VEGDEVTYKMCSIPPKNEKLQAVEVVITHLAPGTKHETWSGHVISN"
     exon            210..332
                     /gene="Carhsp1"
                     /gene_synonym="1200011K09Rik; Crhsp-24; D16Ertd465e"
                     /inference="alignment:Splign:2.1.0"
     exon            333..2849
                     /gene="Carhsp1"
                     /gene_synonym="1200011K09Rik; Crhsp-24; D16Ertd465e"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      2849
                     /gene="Carhsp1"
                     /gene_synonym="1200011K09Rik; Crhsp-24; D16Ertd465e"
                     /note="putative"
ORIGIN      
        1 agtcgaagag cagcagctgg aggagtagga cgtgtcgcca ggtcagccat gtcatctgag
       61 cctcctccac cgccgctgca gccccccacg catcagactt ctgtagggct attggatacc
      121 cctcgcaccc gggatcgctc tccatccccc ctgcggggca atgtggtccc tagccctctg
      181 cctacccgcc ggacaaggac cttctcagcg acagtgcggg cttcgcaggg ccccgtctac
      241 aaaggagtct gtaaatgctt ctgccggtcc aagggccacg gcttcatcac cccagctgat
      301 ggtggtcctg acatcttcct gcacatctct gatgtggaag gggagtatgt tccggtggaa
      361 ggcgacgaag tcacctataa gatgtgctct atcccaccca agaacgagaa gctgcaggct
      421 gtagaggtgg tcatcaccca cctggcacca gggaccaagc atgagacctg gtctgggcac
      481 gtcatcagca actagggacc tgcaagaacc ccttctcctg ggcttgaggg agactttggg
      541 ggaaggagga gcagggccat cctggataga acattctacc atacaagatg gggcctcaag
      601 gcgggcgtgg cccctctcaa gcatttcctg gagggaagga gttgcgggca ggcaaggggt
      661 gctctcagcc accagtgcag cctccagcca ttgcaacaag ctctcactgt ctgaaaagca
      721 ttaaaagcat ttgaaaagga gaggcacctg cggaggctga gtggcgaggg tgcagtccca
      781 gcccaaggca cccgagtagg tcaaacgtgc tattttccca aatgccccct cagatcaagc
      841 ctgtaaggac tattcctcag atctactcgg ccccctgagg gatgtcacca gccctatgaa
      901 gacttcccat gacccaatgc cctggtcggg gaagcttccc aggggacttt gcctcttggt
      961 gcctttgcag caggtctgtc tccaccttca ccttctggga aagactctaa tgcttaggat
     1021 ctctgctgta gcacagtaac ctgggactgg gcactggcac cactccggag aaggctgggc
     1081 ttttccactt ggcctctagg gatcaggcgg cctccatgtg gcattaaaag cctatcatta
     1141 aagtagtgct gggggtggct gtgggggtgg ggaagagacc tcagcaggaa ggcccaagag
     1201 gggagggtgg tgctttattt aaaaacagaa tccaggctag tggtgcatgc ctgtaatctc
     1261 tgcacttggc aggttgaaac agcattctag gccagcctag gctacaatct gttaaaacaa
     1321 gggctgggga tatagctcag tggtgatgag tgctttactt agcccagcgt gtgaaggagt
     1381 ctccgttcca ctgctagcat aaaccctagg atgttgacac tgacccactg aagaaaggca
     1441 gcttcctttc tgatggcctt gtaaggatag gtgttgaagg agaaatcaaa ggtatattct
     1501 ctaagacatg cctaaggatc ttttcccttc ttccccagtg cttggggagc ccagagccct
     1561 ggaaatgcca acagcacaga gctatgacga agcctcggcc tgctttcttt tttggtgtgt
     1621 gtagagttgg ggtttgggga agacaggctc ctgctgtata gcccaggctg gccccaagct
     1681 cttagcacct ttcatgcctt ggcttcctat ttgctggggt cacaggtgtg ccttcactcc
     1741 ctgatgcttt cttttttaat agctcagact tccacagagc cctgttttgc ccctgcctgc
     1801 aacactggag agctgtgttt caaatgaatt gatccctaga ctttttggtg gttggcttta
     1861 gttatgattc aaaaatagaa gtagttggga aatgggtttt gaaatgtagc tgagagctca
     1921 cgtgtcagaa cagggacgcc cattctacag tggtgactgc cttgagggct gtcccccatc
     1981 ctaaaggtac aaaggttgtg gctttcagac atagggtaaa gtgtttaaaa atgagttggg
     2041 tccccagaaa aagctaagat gcagtggtgc acacttaggt agtcccagaa ctgggcaggc
     2101 tgagccacaa tgcctagggt tggccatcta gccagcctag cttatttggc gagtttgagg
     2161 tcagagaacc tatttttgtc tttttaaaaa agtgcctagc acctaagaaa caaacaaaaa
     2221 cgtgttgtct tctggtttct acatgcatga gaacacaaaa aaatatgtgg atacacttgt
     2281 tagggtcttg tgcagcggac tccagtacca cccagctgac catctttgtt gttgagctgc
     2341 cgatggtcat ttttctactt ggtcaaacat ggccttttcc ccacaccagg cttggtttac
     2401 tgcccagagg ctctcttgag gccaaggaac agaagtctag acccatgctt gccatgacct
     2461 aggaaggcgg ctccctgaga ccgacaacct tctgataccc cattgttcct agtggccaat
     2521 acagctttgc tttcactctg gtatggttag actttgggca gcacatggtt gacctgctag
     2581 tgagccctgt cccccactga gctggcagac tggcctctga attcttctgc cccacagaac
     2641 cctttgtaaa gggcttttct tgtatggtca cttcagcctg tagacttatc ccggaactgc
     2701 aaggtgttgg gaaagacccc tgtgatcaga gagtgtcaac ttatagataa ggagggaccc
     2761 cagcatccag tgctggagac tgatagactc ccaaagctag atgtttgagc ccataagcca
     2821 actctttctc aataaagttt gttttgtgc
//
