LOCUS       XM_006498135            1858 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus caspase recruitment domain family, member 9
            (Card9), transcript variant X1, mRNA.
ACCESSION   XM_006498135
VERSION     XM_006498135.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006498135.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..1858
                     /gene="Card9"
                     /gene_synonym="Gm782"
                     /note="caspase recruitment domain family, member 9;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     17 samples with support for all annotated introns"
                     /db_xref="GeneID:332579"
                     /db_xref="MGI:MGI:2685628"
     CDS             172..1800
                     /gene="Card9"
                     /gene_synonym="Gm782"
                     /codon_start=1
                     /product="caspase recruitment domain-containing protein 9
                     isoform X1"
                     /protein_id="XP_006498198.1"
                     /db_xref="GeneID:332579"
                     /db_xref="MGI:MGI:2685628"
                     /translation="MSDYENDDECWSTLESFRVKLISVIDPSRITPYLRQCKVLNPDD
                     EEQVLSDPNLVIRKRKVGVLLDILQRTGHKGYVAFLESLELYYPQLYRKVTGKEPARV
                     FSMIIDASGESGLTQLLMTEVMKLQKKVQDLTALLSSKDDFIKELRVKDSLLRKHQER
                     VQRLKEECELSSAELKRCKDENYELAMCLAHLSEEKGAALMRNRDLQLEVDRLRHSLM
                     KAEDDCKVERKHTLKLRHAMEQRPSQELLWELQQEKDLLQARVQELQVSVQEGKLDRN
                     SPYIQVLEEDWRQALQEHQKQVSTIFSLRKDLRQAETLRARCTEEKEMFELQCLALRK
                     DAKMYKDRIEAILLQMEEVSIERDQAMASREELHAQCTQSFQDKDKLRKLVRELGEKA
                     DELQLQLFQTESRLLAAEGRLKQQQLDMLILSSDLEDSSPRNSQELSLPQDLEEDAQL
                     SDKGHGAQQQRAPGEGAAAPQGELRELPQVWGGGQDGWRVGHLCLPAHTAGPTGSGRS
                     ARCRTAGGREKGIAGIRQAATTPTPRAPSEPRRG"
ORIGIN      
        1 cgtcaaccag aacacatcaa tcaggaagtg cacagcctcc ttcatggctc cacccttctc
       61 cagttaggga acccctccac actcccagag acccaggctc ctggtatgtc cataacccag
      121 acagcatctg ctggcaggta gctctcacaa gaccctgagc ctacagagga catgtcagac
      181 tatgagaatg acgacgagtg ctggagcacc ctggagagct tccgggtgaa gctcatctct
      241 gtcattgacc cctcccggat cacaccctat ctacgccagt gcaaagtcct gaaccccgat
      301 gatgaggagc aggtgctcag tgaccccaac ctggtcatcc gcaagcggaa agtgggtgtg
      361 ctcctggaca tcctgcagcg gacaggccac aagggctacg tggctttcct cgagagcctg
      421 gagctctact accctcagtt ataccggaaa gtcactggca aggagccagc acgcgtcttc
      481 tccatgatca ttgatgcatc aggggagtct ggcctgacgc agctgctgat gacagaggtc
      541 atgaagctgc agaagaaggt tcaggacctg acggcccttc tgagctccaa ggacgacttc
      601 atcaaggagc tgagggtaaa ggacagccta ctgcgcaagc accaggagcg ggtgcagcgg
      661 ctcaaggagg agtgtgagct gagcagtgcg gagctgaagc gctgcaagga cgagaactat
      721 gagctggcca tgtgcctggc acatctgagt gaagagaagg gcgcagcact catgcggaac
      781 cgtgacctgc agcttgaggt ggaccggctc aggcacagcc tcatgaaggc cgaggatgac
      841 tgcaaggtgg agcgcaaaca cacactgaag ctcaggcacg ccatggagca gcggcctagt
      901 caggagctgc tgtgggaact acagcaggaa aaggacttgc tgcaggcccg ggtgcaggag
      961 ctgcaggtct ctgtgcagga gggtaagcta gacaggaata gtccatacat tcaagtgctg
     1021 gaggaggact ggcgtcaagc actgcaggaa caccagaagc aggtcagcac catcttctcc
     1081 ctacggaagg acctccgcca ggctgagacc ctccgggccc ggtgcacgga agaaaaggag
     1141 atgttcgagc tgcagtgcct ggccttgcgc aaggatgcca agatgtacaa ggaccgtatc
     1201 gaggctatcc tgctgcagat ggaggaggtc tccattgaga gggaccaggc tatggcctcc
     1261 agggaagagc tgcatgcaca gtgtacccaa agctttcagg acaaagataa gcttcgaaag
     1321 ctggttcgag agctgggtga gaaggcagat gagctgcagc tacagctgtt ccagacggag
     1381 agccgattac tggccgccga gggcagactc aagcagcagc aattggacat gctcatcctg
     1441 agctctgact tggaagacag ttcacccagg aactcccagg agctctcact gcctcaggat
     1501 ctggaggagg atgcccagct ctcagacaaa gggcatgggg cccagcagca gcgagccccc
     1561 ggagaaggag cggcggcgcc tcaaggagag cttcgagaac taccgcaggt gtggggcggc
     1621 gggcaggacg gctggcgggt gggacacctg tgcctacctg ctcacactgc gggccccaca
     1681 ggaagcgggc gctccgcaag atgcagaaca gctggcggca gggagaaggg gatcgcggga
     1741 atacgacagg cagcgacaac accgacaccg agggctccta gcgaaccgcg ccgaggctga
     1801 gcatctgtgg aattgtgaaa ggatgctgcg gttttttttt tttttttttt ttttttac
//
