LOCUS       NM_001409937            4545 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus CaM kinase-like vesicle-associated (Camkv), transcript
            variant 2, mRNA.
ACCESSION   NM_001409937 XM_006511722
VERSION     NM_001409937.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4545)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4545)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4545)
  AUTHORS   Liang,Z., Zhan,Y., Shen,Y., Wong,C.C., Yates,J.R. 3rd, Plattner,F.,
            Lai,K.O. and Ip,N.Y.
  TITLE     The pseudokinase CaMKv is required for the activity-dependent
            maintenance of dendritic spines
  JOURNAL   Nat Commun 7, 13282 (2016)
   PUBMED   27796283
  REMARK    GeneRIF: Camkv has a role in activity-dependent maintenance of
            dendritic spines
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4545)
  AUTHORS   Ballif,B.A., Villen,J., Beausoleil,S.A., Schwartz,D. and Gygi,S.P.
  TITLE     Phosphoproteomic analysis of the developing mouse brain
  JOURNAL   Mol Cell Proteomics 3 (11), 1093-1101 (2004)
   PUBMED   15345747
REFERENCE   5  (bases 1 to 4545)
  AUTHORS   Thuret,S., Bhatt,L., O'Leary,D.D. and Simon,H.H.
  TITLE     Identification and developmental analysis of genes expressed by
            dopaminergic neurons of the substantia nigra pars compacta
  JOURNAL   Mol Cell Neurosci 25 (3), 394-405 (2004)
   PUBMED   15033168
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL731808.26.
            
            On Jul 25, 2022 this sequence version replaced XM_006511722.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219383.109447.1,
                                           SRR17784647.363989.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1654              AL731808.26        39455-41108
            1655-1758           AL731808.26        48836-48939
            1759-1890           AL731808.26        49046-49177
            1891-1965           AL731808.26        49347-49421
            1966-2104           AL731808.26        49636-49774
            2105-2225           AL731808.26        49897-50017
            2226-2301           AL731808.26        50175-50250
            2302-2438           AL731808.26        50340-50476
            2439-2517           AL731808.26        50639-50717
            2518-2605           AL731808.26        50937-51024
            2606-4545           AL731808.26        51301-53240
FEATURES             Location/Qualifiers
     source          1..4545
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 59.07 cM"
     gene            1..4545
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /note="CaM kinase-like vesicle-associated"
                     /db_xref="GeneID:235604"
                     /db_xref="MGI:MGI:2384296"
     exon            1..1654
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     exon            1655..1758
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     CDS             1664..3202
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /note="vesicle-associated calmodulin-binding protein"
                     /codon_start=1
                     /product="caM kinase-like vesicle-associated protein"
                     /protein_id="NP_001396866.1"
                     /db_xref="GeneID:235604"
                     /db_xref="MGI:MGI:2384296"
                     /translation="MPFGCVTLGDKKNYNQPSEVTDRYDLGQVIKTEEFCEIFRAKDK
                     TTGKLHTCKKFQKRDGRKVRKAAKNEIGILKMVKHPNILQLVDVFVTRKEYFIFLELA
                     TGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLKLENLVYYNRLKNS
                     KIVISDFHLAKLENGLIKEPCGTPEYLAPEVVGRQRYGRPVDCWAIGVIMYILLSGNP
                     PFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTRLMEVEQDQRIT
                     AEEAISHEWISGNAASDKNIKDGVCAQIEKNFARAKWKKAVRVTTLMKRLRAPEQSGT
                     AATQSASDAATPGAAGGAIAAAAAAAAAGGAASASGASATAATEGGAGCAAKSDDIAS
                     ADRSATPATDGSATPATDGSVTPATDGSITPATDGSVTPATDRSATPATDGRATPATE
                     ESTVPATQSSALPAAKAAATPEPAVAQPDSTALEGATGQAPPSSKGEEATGCAQESQR
                     VETS"
     exon            1759..1890
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     exon            1891..1965
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     exon            1966..2104
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     exon            2105..2225
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     exon            2226..2301
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     exon            2302..2438
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     exon            2439..2517
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     exon            2518..2605
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     exon            2606..4545
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4523..4528
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /note="hexamer: AATAAA"
     polyA_site      4545
                     /gene="Camkv"
                     /gene_synonym="1G5"
                     /note="major polyA site"
ORIGIN      
        1 agagagcgac tggcgatgct ggaggttctg gagtcgaagc ggctgcagct ggcgccgcgt
       61 ctgccccgcg tgcccggagc ggattctgcc cgccgccccc ggagccctgc tgagcgggtt
      121 atcgcttcct gcctgtgacc gaccagcttt gcaggtgcgg agcagggagg gctgggccgg
      181 tggggagggc gcctcctgga tgcacgttgg ggggccttgg gagattgttt ccctggttag
      241 agaatccccg cgcaggatgc gcgcgatcac cgcgaggact ctgggggtcc caagcagggg
      301 cacagcgcac cgtttctgca gatgcgaggt ggggtggcgt gcggggttgg gctaaagttc
      361 cccattacct ctgacggctt gggagggtcc cagagaaagc ctctgcagct ccgaattgta
      421 aaaaacataa accctcgaag attcgtggtg ccccttatag gggtaaaggg ccaagggccg
      481 agcggtccat cctcgctcct agagcggtct tcagcccctc cccaactgcc cctgggggcc
      541 ccctccctct ggtttggcag tcactaattt ccatgacaac ggagagttct ttatgggcga
      601 caatccggag ggggctgggc ggggctgctg cggggctggg ggaggaggtt ctaagcccga
      661 gtggactatt ggcccccaag ctaagttcag gcttccaagc cttctgaggg tcttttgtca
      721 agggaggtgg gggcgcagcg cactgacaca cgtgcgaggt gggggtgcgg ggcgcacatg
      781 tttctgctgg gaggtgcggg gcttgctgct cacacgtgtg cctcccgcat gtgtgttgct
      841 gtgccagcgg gggcgagcca gcagcactgg ggaagggggt cagagtggta ccatggtgaa
      901 gagcagggac tctgcctgga gtcgcagggg acaattaaag cgttagcctc tctgtctttt
      961 tcagcttgct attgcttgac aggagaccct gggcttttga gccccagccc catgaagggc
     1021 tgccaactgc tccccgaccc caaacctgtt ctagcaggtt ccttcctaga gaacagggcc
     1081 cccttttcct caccaaaagc tcctagctgg tctatacgac tctagtgggt cttttgcaca
     1141 ccagcctcca aacacaggct caggctttgg ggcccccagg accacctttg cagaagtagg
     1201 ctggcttccc ctccccctct gagttgatta ctggcagatt cagtgacttc tgagcctccc
     1261 tttcctaact tggaaattag tatctccatt cccttcatag ccaggatggg acagaggtct
     1321 cccttttttt cccctcattt agtgtggatc cccaggcgcc ctaccctggc tctgtatata
     1381 tctgctgcag gcccttctct gtgtcttcat tccctggtgg ctaccaatta gccggctggt
     1441 ggcagtcctc tgctctgttc agggaaactg agacctgggg ggtgttggtg tgcctttgtc
     1501 ttcctgtttc tggcttgctc atggtgctgt tttggctgct gcttttggcc atcctgagat
     1561 ctgcccaaga ctgaggctgg gatgaagaag ggccctggaa acccaaggcc tggagagttc
     1621 agctgactga ggtggagatt gctggggacc ctggagccta gcaatgccgt ttgggtgtgt
     1681 gactctgggt gacaagaaga actataacca gccatcggaa gtgactgaca gatatgacct
     1741 gggacaagtc atcaagactg aggagttctg tgaaatcttc cgggccaagg acaagacaac
     1801 gggcaagctg cacacctgta agaagttcca gaagcgtgat ggccgcaagg tgcggaaggc
     1861 agccaagaac gagattggaa tcctcaagat ggtgaagcac cccaacatcc tgcagctggt
     1921 agatgtgttt gtgacccgca aggaatactt catctttctg gagctggcca cggggaggga
     1981 ggtgtttgac tggatcctgg accagggcta ctactcggag cgagacacga gcaacgtggt
     2041 gcggcaggtc ttggaggctg tggcctactt gcactcgctc aagattgtgc acaggaacct
     2101 caagctggaa aacctagtgt actacaacag gctgaagaac tcaaagattg tcatcagcga
     2161 ctttcacctg gctaagctag agaatggcct tatcaaggag ccctgtggaa ccccggagta
     2221 tctggcacca gaagtggtag gacggcaacg gtacggtcgc cctgtagact gttgggccat
     2281 tggcgtcatc atgtatatcc tgctttcagg caacccgccc ttctacgagg aggtggaaga
     2341 agatgactat gagaaccacg ataagaatct cttccgcaag atcctggctg gtgactatga
     2401 gtttgactct ccgtactggg acgatatttc tcaagcagcc aaagacctgg tcaccaggct
     2461 gatggaggtg gagcaagacc agcggatcac cgcagaagag gccatctccc acgaatggat
     2521 ttccggcaac gcggcttctg ataagaacat caaggatggc gtctgtgccc agattgagaa
     2581 gaactttgcc agagccaagt ggaagaaggc tgtccgagtg accactctca tgaagcggct
     2641 ccgggcacca gagcagtctg gaacagcggc gacccagtct gcttcagacg ctgccactcc
     2701 tggggctgct ggtggggcca tcgctgctgc agctgcagct gcagctgcag gtggagctgc
     2761 ctcagcctct ggggccagtg ctactgcagc cacagagggt ggtgctgggt gtgctgccaa
     2821 gagcgatgac atagcctctg cagatcgtag tgctacacca gccacagatg gcagcgccac
     2881 tccagccaca gatggcagcg tcaccccagc cacggatggc agcatcaccc cagccactga
     2941 cgggagtgtc actccagcta ctgacagaag cgctacacca gctactgatg gcagagccac
     3001 accagccaca gaagagagca cagtgcccgc cactcaaagc agtgccctgc cagctgcaaa
     3061 ggcagcagcc acccctgagc cggctgtggc ccagccggac agcacagccc tagagggtgc
     3121 cacaggccag gctccaccct ctagtaaagg agaagaggct actggatgtg cccaggagtc
     3181 tcagagggtg gagacgagct gaatgggcag cctgttgggg ggttttgagg gatgggaagg
     3241 agggtgggag tttggatgag gggcttctca ctgtatatag agtcactggc atgatgccct
     3301 agctcccccc aagctccctc atcccagtgg ggcatgcctg ggggccatgg gagagcagtc
     3361 ttgtctcctg tgtggatgta tgtgagtggc gggcaggcca gaggcagggc cagccccagc
     3421 ccctgcatgg attccttgtg gctttctgtc tttcgctagc ttcaccagtt tctgttcctt
     3481 gtgggatgct gctctaggga tactcagggg gtccttgctc tccttccctc cctgcctcat
     3541 cactccccca ggcaggccct gcaaacctca tcctttccca ggccctaaat gggtggcctt
     3601 gccctgagag ctggtcctcc agcgaggccc tgtcagcagt gttaggctcc tgcacgggaa
     3661 ggtgtgtacc tgtggtgttt gggctgctct aggagtgtgc aagagaggat gcagaaaacc
     3721 tagggcagtg tgctttaagt caagtctggt cacgtggtag ggagcaggca ttgcatgtta
     3781 gctgtgggga tcctcagaag tgggagagag aatgggtaga agcttccatc ttttttccct
     3841 gggtgggggt ggcgatcttc cctcttgaag atccttgtgt tatttcatag cctcctgagt
     3901 cctgtagcgg gttgctctgt atcccgattc ttaggagact ctaaaggaag agagaaacat
     3961 gtcggacaca gcagcgacgc ctaggagaac agagtacagt gccccagcct atctggctcc
     4021 ttcctgtgag ctggataggg agggctggtg tccccccatc cccccatcgt cttcctagat
     4081 gccattacca agaaagagac ctttgccata gccacctcat gcaggctcag gcagtaaatc
     4141 ctattcctcc cagggaggcg tggcagcacc tcataggctg cgttgggagc atgcttttca
     4201 cagcagcaga ttttctgctc ttagtgcagc gatatgggga ggcttttcct ctttgtctac
     4261 catcagaggc tgaggtattg ctcagccatg tgaagtagct ctggctggga tgaggaagta
     4321 gactacagtt ccccagctcc ctgagggatg ctctcagcag gtgcccttgg tcagacccta
     4381 ccacagcctg aacaggcagc cacgctggtc cttgcccttg ctcggcactc catggtggtc
     4441 ctgcccttct ccctgcatgc ctgtgggtct gctctggtat gtgaaggttg gtgggctaac
     4501 tgtgtgccta ctgaacctgg caaataaacg tcaccctgca aagcc
//
