LOCUS       XM_006534460            1787 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus calcium binding and coiled-coil domain 2
            (Calcoco2), transcript variant X1, mRNA.
ACCESSION   XM_006534460
VERSION     XM_006534460.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006534460.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..1787
                     /gene="Calcoco2"
                     /gene_synonym="2410154J16Rik; Ndp52; Ndp52l1"
                     /note="calcium binding and coiled-coil domain 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 146 ESTs, 1 Protein, and 87% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:76815"
                     /db_xref="MGI:MGI:1343177"
     CDS             208..1242
                     /gene="Calcoco2"
                     /gene_synonym="2410154J16Rik; Ndp52; Ndp52l1"
                     /codon_start=1
                     /product="calcium-binding and coiled-coil
                     domain-containing protein 2 isoform X1"
                     /protein_id="XP_006534523.1"
                     /db_xref="GeneID:76815"
                     /db_xref="MGI:MGI:1343177"
                     /translation="MPQSKASDLQDFTMDQCPIPTLLEHGNFSQVLFNNVEKFYAPRG
                     DIMCYYTLTEKFIPRRKDWIGIFKVGWKTTQEYYTFMWAPLPKDQNKDSATQQEIQFK
                     AYYLPKDVERYQFCYVDEDGLVRGTSVPFQFCPDPDEDIMVVINKEKVEEMEQLSEEL
                     YQQNQELKDKYADLHEQLQRKQVALEATQRVNKTLEHKVEEKASWEKEKASWEEEKAS
                     WEEEKASWEEEKASWEEEKASWEEEKASWEEEKASWEEEKASWEEEKASWEEEKASWE
                     EEKASWEEEKASWEEEKASWEEEKASWEKEKASWEEEKASWEKEKAPWEVEKAPWKEV
                     KAYWWNDLHR"
ORIGIN      
        1 atctgattaa ccgtcgccgc gcccgcagag ggtagtgcca aggttgtccc tggagacgcg
       61 gaggacgctc aggctgcgcc gcccagcgcg aggagcacgg agagggctag tttccgcttg
      121 gttccacaac ccttccctcc tcgcccccac ggggatcccc ctgggtctgg acgttgtggg
      181 ggtgtcccct acgcacgggc gggctgaatg ccgcaatcca aagcttctga tcttcaggac
      241 ttcaccatgg accagtgccc catacctacc ttgctggaac atggcaactt ctctcaggtc
      301 ctgtttaaca atgtggagaa gttctatgct cctagaggag atatcatgtg ctattacacc
      361 ctcactgaaa agttcatccc tcgacgcaag gactggattg gcatctttaa agtagggtgg
      421 aagaccactc aggagtatta taccttcatg tgggctccct tgccaaaaga ccaaaacaag
      481 gattcagcca cacagcagga aatccaattc aaagcttatt accttcccaa ggatgtggag
      541 cgctaccagt tctgctatgt ggatgaagat ggtttagtcc ggggaacaag tgtccctttc
      601 cagttttgtc cagaccctga cgaggacata atggttgtta tcaataagga aaaggtagaa
      661 gagatggaac agctcagtga ggagctttac caacaaaacc aggagctgaa agacaagtac
      721 gctgacctcc atgagcagct acagaggaag caggtggcac tggaagcaac acagagggtc
      781 aataagacct tagaacacaa agtggaagag aaggcctcct gggagaaaga gaaggcctcc
      841 tgggaggaag agaaggcctc ctgggaggaa gagaaggcct cctgggagga agagaaggcc
      901 tcctgggagg aagagaaggc ctcctgggag gaagagaagg cctcctggga ggaagagaag
      961 gcctcctggg aggaagagaa ggcctcctgg gaggaagaga aggcctcctg ggaggaagag
     1021 aaggcctcct gggaggaaga gaaggcctcc tgggaggaag agaaggcctc ctgggaggaa
     1081 gagaaggcct cctgggagga agagaaggcc tcctgggaga aagagaaggc ctcctgggag
     1141 gaagagaagg cctcctggga gaaagagaag gccccctggg aggtagagaa ggccccctgg
     1201 aaggaagtga aggcctattg gtggaatgat ctgcaccggt gagtggggga agggccactc
     1261 actgttagca ctgcctgttc tggtttggta tgattgcaca tcccagactg aggaccagaa
     1321 gtttaaggcc atccttagct acacagtgaa tctgaggcca gcgtaggcta catgatggcc
     1381 tgtcccaaaa caaaacaaag aaacccctgt ctcaaaagga ctcagccaag tggtcgtgca
     1441 cacctttaat ctcagcacta gggaagctgg gacagaagga ttgccccagt tcgggataaa
     1501 tagtagctgg ccagacagct atatagcaag accctatttc agaaaccaaa gaaaggagaa
     1561 aaaattgatt gttaaatgtg gttgtatgat tttaaaccca ctagaagatg tactttgata
     1621 tgtgtgtgta tcctgggtac cctctgagct cagagagggt atcaggtctc tgaaactgga
     1681 gttacagagt tatgagctag gtaccaaacc tgagtcctgt gcaagagcat caagtgctct
     1741 tcacttttga gccatccctc caaccataaa ttaactttac attcata
//
