LOCUS       NM_133183               1510 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus calcium channel, voltage-dependent, gamma subunit 6
            (Cacng6), mRNA.
ACCESSION   NM_133183 XM_888411
VERSION     NM_133183.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Liu,H., Zhou,R., Li,S., Dong,J., Fang,Y., Luo,Y., Su,H., Lai,B.,
            Liang,L., Zhang,D., Zhang,Y., Shyy,J.Y., Zhou,B., Yuan,Z. and
            Wang,Y.
  TITLE     Epigenetic repression of Cend1 by lysine-specific demethylase 1 is
            essential for murine heart development
  JOURNAL   iScience 27 (1), 108722 (2023)
   PUBMED   38226173
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1510)
  AUTHORS   Ross,J.A., Arcos-Villacis,N., Battey,E., Boogerd,C., Orellana,C.A.,
            Marhuenda,E., Swiatlowska,P., Hodzic,D., Prin,F., Mohun,T.,
            Catibog,N., Tapia,O., Gerace,L., Iskratsch,T., Shah,A.M. and
            Stroud,M.J.
  TITLE     Lem2 is essential for cardiac development by maintaining nuclear
            integrity
  JOURNAL   Cardiovasc Res 119 (11), 2074-2088 (2023)
   PUBMED   37067297
REFERENCE   4  (bases 1 to 1510)
  AUTHORS   Templin,J.S., Bang,S.J., Soiza-Reilly,M., Berde,C.B. and
            Commons,K.G.
  TITLE     Patterned expression of ion channel genes in mouse dorsal raphe
            nucleus determined with the Allen Mouse Brain Atlas
  JOURNAL   Brain Res 1457, 1-12 (2012)
   PUBMED   22534482
  REMARK    GeneRIF: This study demonistrated that Cacng6 gene expression in
            mouse dorsal raphe nucleus
REFERENCE   5  (bases 1 to 1510)
  AUTHORS   Harrell,M.D., Harbi,S., Hoffman,J.F., Zavadil,J. and Coetzee,W.A.
  TITLE     Large-scale analysis of ion channel gene expression in the mouse
            heart during perinatal development
  JOURNAL   Physiol Genomics 28 (3), 273-283 (2007)
   PUBMED   16985003
REFERENCE   6  (bases 1 to 1510)
  AUTHORS   Chu,P.J., Robertson,H.M. and Best,P.M.
  TITLE     Calcium channel gamma subunits provide insights into the evolution
            of this gene family
  JOURNAL   Gene 280 (1-2), 37-48 (2001)
   PUBMED   11738816
REFERENCE   7  (bases 1 to 1510)
  AUTHORS   Burgess,D.L., Gefrides,L.A., Foreman,P.J. and Noebels,J.L.
  TITLE     A cluster of three novel Ca2+ channel gamma subunit genes on
            chromosome 19q13.4: evolution and expression profile of the gamma
            subunit gene family
  JOURNAL   Genomics 71 (3), 339-350 (2001)
   PUBMED   11170751
REFERENCE   8  (bases 1 to 1510)
  AUTHORS   Klugbauer,N., Dai,S., Specht,V., Lacinova,L., Marais,E., Bohn,G.
            and Hofmann,F.
  TITLE     A family of gamma-like calcium channel subunits
  JOURNAL   FEBS Lett 470 (2), 189-197 (2000)
   PUBMED   10734232
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC217111.9.
            
            On Nov 20, 2015 this sequence version replaced NM_133183.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC115457.1, AF361348.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849385
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-331               AC217111.9         122682-123012
            332-406             AC217111.9         128458-128532
            407-544             AC217111.9         129839-129976
            545-1510            AC217111.9         132722-133687
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 2.0 cM"
     gene            1..1510
                     /gene="Cacng6"
                     /gene_synonym="2310033H20Rik"
                     /note="calcium channel, voltage-dependent, gamma subunit
                     6"
                     /db_xref="GeneID:54378"
                     /db_xref="MGI:MGI:1859168"
     exon            1..331
                     /gene="Cacng6"
                     /gene_synonym="2310033H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            332..406
                     /gene="Cacng6"
                     /gene_synonym="2310033H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            407..544
                     /gene="Cacng6"
                     /gene_synonym="2310033H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            545..1510
                     /gene="Cacng6"
                     /gene_synonym="2310033H20Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1485..1490
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Cacng6"
                     /gene_synonym="2310033H20Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1510
                     /gene="Cacng6"
                     /gene_synonym="2310033H20Rik"
                     /note="major polyA site"
ORIGIN      
        1 atgatgtggt ctaacttctt catgcaagag gaagaccgac gccggacagc tgtgggccgg
       61 cgtcgtgccc aagaacagca gaatctcggc ttgactccgg agcgagaggg caagatcaag
      121 ctggggttgc tggtggcaat cgtgggtgct acgctggctg tgctggctgt gggcaccgag
      181 ttctgggtgg aactcaatac atacaagacc aatggcagcg ccgtctgtga ggccgcccat
      241 ttggggctgt ggaaggtgtg catcaagcga ctgtggcagg cggatgtgcc cgcgggcagg
      301 gagacctgtg gcccagctga gctgccagga gaagcaaact gcacctactt caaattcttc
      361 accacggggg aaaatgcgcg catcttccag cgaaccacca agaaagaggt aaacctggca
      421 gctgccgtga tagctgtgct gggcctgacg gccatggcct tgggctgcct ctgtgtcatc
      481 atggtgctca gtaaaggtgc agagtccctg ctccgattgg gagctgtctg ctttggcctc
      541 tcaggcctgc tgctctttgt cagcctggag gtgttccggc attccgtagg agccctgctg
      601 cagggagtca accctgagac ccctccagct ccacgcctgg cctatgagta ttcctggtcc
      661 ttaggctgtg gtgtgggcgc tggtctaatc ctgctgctgg ggggagtctg tttcctcctg
      721 ctcaccttgc cttcctggcc ctggaggtca ctgtgcccca agtggggtgg cccaaccgcc
      781 tagagcctgc tttctgaaga catctgccaa ccctgtctca gtttccagct ttctcctcaa
      841 gagttttcat ctctcttcta gagaaattgt ttttcccact ctggggggcc catttcacaa
      901 aatgtcttgg tccctccctc atcttctccc tgtaaataat gcttttgggg gtgaggggaa
      961 tggcttagtg agtaaagtgc ttgctgagca agcttgaggg catggagttt gaatccccag
     1021 aacccacttt aaaagccagt acagcagcac atgtctgtaa ttccaatgtt gtgaaggcag
     1081 agattagagg aaccctggaa ctcactgata ggctaattag tctagccaat taatgagatc
     1141 aggtttagtg agagacccct taagaactaa ggcagaagca acaaaggaag atgctaaact
     1201 ctgaaccccc ctcccccccc tacactcttt tttttcttgg tagatgattt tgggttgctt
     1261 gaggtaggat gggaagaggt tatatgcaaa tggggatccg tggggaaact tctgggactg
     1321 agggagtgtt agctggtgag agggctaggt cctgaggtcc tggaaggact ggggagcttt
     1381 ctttgtccaa gtctatactg actcactcaa gggagagatg tcctacgact gcctggtggg
     1441 acagggaaga gccctggtcc gacttcactg tcatctgact tgggattaaa ggtttgaaga
     1501 tgtgactgta
//
