LOCUS       XM_011247906            1731 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus complement component 4 binding protein
            (C4bp), transcript variant X1, mRNA.
ACCESSION   XM_011247906
VERSION     XM_011247906.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 22, 2016 this sequence version replaced XM_011247906.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..1731
                     /gene="C4bp"
                     /gene_synonym="C4bpa"
                     /note="complement component 4 binding protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 85 long SRA reads, 6 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:12269"
                     /db_xref="MGI:MGI:88229"
     CDS             40..1449
                     /gene="C4bp"
                     /gene_synonym="C4bpa"
                     /codon_start=1
                     /product="C4b-binding protein isoform X1"
                     /protein_id="XP_011246208.1"
                     /db_xref="GeneID:12269"
                     /db_xref="MGI:MGI:88229"
                     /translation="MCAKQQQTLLPTRAAHGRLHRNRDAVAWPFSTLCRVSGPTLFQM
                     TFTAALWVAVFGKCGPPPAIPNALPASDVNRTDFESHTTLKYECLPGYGRGISRMMVY
                     CKPSGEWEISVSCAKKHCRNPGYLDNGYVNGETITFGSQIEFSCQEGFILVGSSTSSC
                     EVRGKGVAWSNPFPECVIVKCGPPPDISNGKHSGTEDFYPYNHGISYTCDPGFRLVGS
                     PFIGCTVVNKTVPVWSSSPPTCEKIICSQPNILHGVIVSGYKATYTHRDSVRLACLNG
                     TVLRGRHVIECQGNGNWSSLPTCEFDCDLPPAIVNGYYTSMVYSKITLVTYECDKGYR
                     LVGKAIISCSFSKWKGTAPQCKALCQKPEVGNGTLSDEKDQYVESENVTIQCDSGFAM
                     LGSQSISCSESGTWYPEVPRCEQEASEDLKPALTGNKTMQYVPNSHDVKMALEIYKLT
                     LEVELLQLQIQKEKHTEAH"
ORIGIN      
        1 cctagaggtg gcttttgcag aggtttcctg gcagaacaaa tgtgtgcaaa gcagcagcag
       61 accctgctcc ccacaagagc tgcacatggg aggcttcata gaaacagaga tgctgtggcc
      121 tggccctttt ctacgctctg cagagtctct ggcccaactt tgttccaaat gacctttact
      181 gctgctcttt gggttgctgt atttggcaaa tgtggtccac cacctgctat acccaatgcc
      241 ctgccagcaa gtgacgtgaa tcggacagac ttcgaaagtc acaccaccct gaaatacgaa
      301 tgcctccctg gctatggtag gggaatatca aggatgatgg tttactgcaa accttcggga
      361 gaatgggaga tttctgtctc ctgtgccaaa aaacattgcc gtaatccagg atatttagat
      421 aatggatatg taaatggaga gactatcact tttggatcac agatagaatt cagctgccag
      481 gaaggattta tcttagttgg ctcatccact agttcttgtg aggtccgagg caaaggagtt
      541 gcctggagta atcctttccc agaatgtgta attgtaaagt gtgggccccc tccagacatc
      601 agcaatggga agcacagtgg tacagaagac ttctacccat ataaccatgg aatctcctat
      661 acctgtgatc ccggcttcag gctcgttggc agccccttca taggctgcac tgtggtgaac
      721 aaaacagtac ctgtttggag ctcaagccct cctacctgtg aaaagatcat ctgttctcag
      781 ccaaatattt tacatggtgt aattgtttct ggatataaag ctacctatac acacagagac
      841 tctgttagat tggcctgcct gaatgggact gtcctcagag gcagacatgt catcgagtgt
      901 caaggtaatg gcaattggag ttctctcccg acttgtgagt tcgactgtga tttaccgcct
      961 gccattgtca atggatatta tactagtatg gtctactcta agataactct ggttacatat
     1021 gaatgtgata aaggatacag actggttgga aaggcaatca tctcctgcag cttttcaaag
     1081 tggaaaggga cagctccaca gtgtaaagct ctatgtcaga aaccagaggt aggaaatgga
     1141 acgctgtctg atgagaaaga tcagtatgtt gagtctgaaa atgtcaccat ccaatgtgac
     1201 tctggctttg ccatgctggg ttcccaaagc atcagttgtt cagagagtgg aacctggtat
     1261 ccagaggtgc ccagatgtga gcaggaggcc tctgaagacc ttaagcctgc gcttacaggc
     1321 aacaagacca tgcagtatgt gccaaattca cacgatgtga aaatggctct ggagatctac
     1381 aagctgactc tggaggttga actactacag ctccagatac aaaaggagaa acacactgaa
     1441 gcacactgac cgggagttat gactgtatgt tctcttaagg aggaagtagc gtctcattgg
     1501 ctttctgact tcagttccaa acagattgcc tgcagttacc aacctttgta atgctggcac
     1561 caatgttcat gataataaat atctgcttag aataattcat taattatgtt ataattaata
     1621 ggtagtaaat ctatgaaact atcatcttgt ggctcataaa tttgcttttc tgaatgcaat
     1681 gtgtacattt tgaatgtgtg aattaaaagt caattttgct cttgtcatcc a
//
