LOCUS       NM_011795               1501 bp    mRNA    linear   ROD 17-SEP-2024
DEFINITION  Mus musculus complement component 1, q subcomponent-like 1 (C1ql1),
            mRNA.
ACCESSION   NM_011795
VERSION     NM_011795.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Butts,J.C., Wu,S.R., Durham,M.A., Dhindsa,R.S., Revelli,J.P.,
            Ljungberg,M.C., Saulnier,O., McLaren,M.E., Taylor,M.D. and
            Zoghbi,H.Y.
  TITLE     A single-cell transcriptomic map of the developing Atoh1 lineage
            identifies neural fate decisions and neuronal diversity in the
            hindbrain
  JOURNAL   Dev Cell 59 (16), 2171-2188 (2024)
   PUBMED   39106860
REFERENCE   2  (bases 1 to 1501)
  AUTHORS   Sarver,D.C., Xu,C., Aja,S. and Wong,G.W.
  TITLE     CTRP14 inactivation alters physical activity and food intake
            response to fasting and refeeding
  JOURNAL   Am J Physiol Endocrinol Metab 322 (6), E480-E493 (2022)
   PUBMED   35403439
  REMARK    GeneRIF: CTRP14 inactivation alters physical activity and food
            intake response to fasting and refeeding.
REFERENCE   3  (bases 1 to 1501)
  AUTHORS   Biswas,J., Pijewski,R.S., Makol,R., Miramontes,T.G., Thompson,B.L.,
            Kresic,L.C., Burghard,A.L., Oliver,D.L. and Martinelli,D.C.
  TITLE     C1ql1 is expressed in adult outer hair cells of the cochlea in a
            tonotopic gradient
  JOURNAL   PLoS One 16 (5), e0251412 (2021)
   PUBMED   33979385
  REMARK    GeneRIF: C1ql1 is expressed in adult outer hair cells of the
            cochlea in a tonotopic gradient.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1501)
  AUTHORS   Tenney,A.P., Livet,J., Belton,T., Prochazkova,M., Pearson,E.M.,
            Whitman,M.C., Kulkarni,A.B., Engle,E.C. and Henderson,C.E.
  TITLE     Etv1 Controls the Establishment of Non-overlapping Motor
            Innervation of Neighboring Facial Muscles during Development
  JOURNAL   Cell Rep 29 (2), 437-452 (2019)
   PUBMED   31597102
REFERENCE   5  (bases 1 to 1501)
  AUTHORS   Zhang,Q., Huang,R., Ye,Y., Guo,X., Lu,J., Zhu,F., Gong,X.,
            Zhang,Q., Yan,J., Luo,L., Zhuang,S., Chen,Y., Zhao,X., Evans,S.M.,
            Jiang,C., Liang,X. and Sun,Y.
  TITLE     Temporal requirements for ISL1 in sympathetic neuron proliferation,
            differentiation, and diversification
  JOURNAL   Cell Death Dis 9 (2), 247 (2018)
   PUBMED   29445148
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 1501)
  AUTHORS   Wei,Z., Seldin,M.M., Natarajan,N., Djemal,D.C., Peterson,J.M. and
            Wong,G.W.
  TITLE     C1q/tumor necrosis factor-related protein 11 (CTRP11), a novel
            adipose stroma-derived regulator of adipogenesis
  JOURNAL   J Biol Chem 288 (15), 10214-10229 (2013)
   PUBMED   23449976
REFERENCE   7  (bases 1 to 1501)
  AUTHORS   Bolliger,M.F., Martinelli,D.C. and Sudhof,T.C.
  TITLE     The cell-adhesion G protein-coupled receptor BAI3 is a
            high-affinity receptor for C1q-like proteins
  JOURNAL   Proc Natl Acad Sci U S A 108 (6), 2534-2539 (2011)
   PUBMED   21262840
REFERENCE   8  (bases 1 to 1501)
  AUTHORS   Iijima,T., Miura,E., Watanabe,M. and Yuzaki,M.
  TITLE     Distinct expression of C1q-like family mRNAs in mouse brain and
            biochemical characterization of their encoded proteins
  JOURNAL   Eur J Neurosci 31 (9), 1606-1615 (2010)
   PUBMED   20525073
REFERENCE   9  (bases 1 to 1501)
  AUTHORS   Sie,C.P. and Maas,S.
  TITLE     Conserved recoding RNA editing of vertebrate C1q-related factor
            C1QL1
  JOURNAL   FEBS Lett 583 (7), 1171-1174 (2009)
   PUBMED   19275900
  REMARK    GeneRIF: Conserved recoding RNA editing of vertebrate C1q-related
            factor C1QL1.
REFERENCE   10 (bases 1 to 1501)
  AUTHORS   Berube,N.G., Swanson,X.H., Bertram,M.J., Kittle,J.D., Didenko,V.,
            Baskin,D.S., Smith,J.R. and Pereira-Smith,O.M.
  TITLE     Cloning and characterization of CRF, a novel C1q-related factor,
            expressed in areas of the brain involved in motor function
  JOURNAL   Brain Res Mol Brain Res 63 (2), 233-240 (1999)
   PUBMED   9878755
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL731670.13.
            
            On Jun 19, 2019 this sequence version replaced NM_011795.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC022724.1, BQ174675.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-852               AL731670.13        116794-117645       c
            853-1501            AL731670.13        110193-110841       c
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 66.48 cM"
     gene            1..1501
                     /gene="C1ql1"
                     /gene_synonym="Adil; C1qrf; CRF; CTRP14; gliacolin"
                     /note="complement component 1, q subcomponent-like 1"
                     /db_xref="GeneID:23829"
                     /db_xref="MGI:MGI:1344400"
     exon            1..852
                     /gene="C1ql1"
                     /gene_synonym="Adil; C1qrf; CRF; CTRP14; gliacolin"
                     /inference="alignment:Splign:2.1.0"
     exon            853..1501
                     /gene="C1ql1"
                     /gene_synonym="Adil; C1qrf; CRF; CTRP14; gliacolin"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1481..1486
                     /regulatory_class="polyA_signal_sequence"
                     /gene="C1ql1"
                     /gene_synonym="Adil; C1qrf; CRF; CTRP14; gliacolin"
                     /note="hexamer: AATAAA"
     polyA_site      1501
                     /gene="C1ql1"
                     /gene_synonym="Adil; C1qrf; CRF; CTRP14; gliacolin"
                     /note="major polyA site"
ORIGIN      
        1 agtcgggcag cgcagcggga gggaagcacg aggccggagc cggctgctgg gctccgcagc
       61 gcaagcagcg cagcgcggcg cccgggcccc ggccccatgc ccgcagcccc gccggaccgc
      121 ccttgagcgc gggcgtcgcg cccgcgcccc ttacccgccg gcatcattgc cccgacggcg
      181 cggccgggtg gcccggctct cccaaggctc cgcgccggcc ggaagaccct gctggctgcc
      241 gccgcgggcg tggtgatgct gctcgtgctg gtggtgctca tcccggtgct ggtgagctcc
      301 ggcggcccgg acggccacta tgagatgctg ggcacctgcc gcatggtgtg cgacccctat
      361 cccgcgcggg gccccggcgc cggcgcgcgg tccgacggcg gcgacgctct gagcgagcag
      421 agcggtgcgc ctccgccctc cacgctggtg cagggccccc aggggaagcc gggccgcacg
      481 ggcaagccgg gccctccggg gcctccagga gaccggggcc ctccaggtcc tgtggggccg
      541 cctggggaga agggtgaacc aggcaagcct ggtcctcctg gcctgccggg ttcgggaggc
      601 agcggcgcca tcagcacggc cacctatacc acggtgccac gcgtggcctt ctacgccggc
      661 ctcaagaacc ctcatgaggg ttacgaggtg ctcaagtttg acgacgtggt caccaaccta
      721 ggcaacaact acgatgcggc cagcggcaag tttacatgca acattcctgg cacctacttt
      781 ttcacctacc acgtcctcat gcgcggcggc gacggcacca gtatgtgggc agacctctgc
      841 aagaacggcc aggtgcgggc cagtgcaatt gcccaggatg cagaccagaa ctacgactat
      901 gccagcaaca gcgtgatcct gcatctggac gcaggggatg aggtcttcat caagctggat
      961 ggaggcaaag cacacggggg caacagcaac aaatacagca ctttctctgg cttcatcatc
     1021 tactcggatt gagccccccc ccccgcaccc cttttcatcc gtggctcttc atccttggac
     1081 tcccctcaga ggcaaacaag aatccactcc cctactcatt ttcaaattgc ctgaccaagg
     1141 ctgccgaccc tcccaggctg aattgtcctt agcctgcgtc caaccaccca gtctttcctc
     1201 cgctgaacac aaagctcccc tcttcccgca cgcacgcagt tccggcccgg gtggcaggtt
     1261 gccttcctgg tcccagcctg cactgtatat gtgtacaata ggactgttta ctgagccccc
     1321 ctcctgccag ccagccccag tctggggagg ggggcaggga gttggcgcgg ttgcttcctg
     1381 tagggtgacc ctgccttggg gaggagtggg ttaggggttg gatagcttcc cagcacccac
     1441 aaaaccctgg aacagctgca cccggtctga ccaaagctat aataaaaaca ttttgacccc
     1501 a
//
