LOCUS       XM_011247119            6323 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus beta-transducin repeat containing protein
            (Btrc), transcript variant X3, mRNA.
ACCESSION   XM_011247119
VERSION     XM_011247119.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000085.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011247119.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6323
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="19"
     gene            1..6323
                     /gene="Btrc"
                     /gene_synonym="b-TrCP; beta-TrCP; Beta-Trcp1;
                     E3RS-IkappaB; E3RSIkappaB; Fbw1a; FWD1; HOS; SCF b-TRCP;
                     Slimb"
                     /note="beta-transducin repeat containing protein; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 53 ESTs, 762 long SRA reads, 14 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 31 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:12234"
                     /db_xref="MGI:MGI:1338871"
     CDS             160..1929
                     /gene="Btrc"
                     /gene_synonym="b-TrCP; beta-TrCP; Beta-Trcp1;
                     E3RS-IkappaB; E3RSIkappaB; Fbw1a; FWD1; HOS; SCF b-TRCP;
                     Slimb"
                     /codon_start=1
                     /product="F-box/WD repeat-containing protein 1A isoform
                     X3"
                     /protein_id="XP_011245421.1"
                     /db_xref="GeneID:12234"
                     /db_xref="MGI:MGI:1338871"
                     /translation="MDPAEAVLQEKALKFMAAVPAGGYWRNNKKCSMPRSLWLGCSSL
                     ADSMPSLRCLYNPGTGALTAFQNSSEREDCNNGEPPRKIIPEKNSLRQAKLANGTSSM
                     IVPKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPML
                     QRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVR
                     TDSLWRGLAERRGWGQYLFKNKPPDENAPPNSFYRALYPKIIQDIETIESNWRCGRHS
                     LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQ
                     YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW
                     DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK
                     RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY
                     DGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDF
                     LNDPAAHAEPPRSPSRTYTYISR"
ORIGIN      
        1 gcagagccgc ggtcctcctc gggccccctg ccagtgccag gaggtaaaaa gagagggcgg
       61 gggaaggaag aggaggcggg atccggacgc tgcgttggct gcggcctggc acgaaagggg
      121 cggccccggc ggagagcaga cccagtagtc cgggcgatta tggacccggc agaggcggtg
      181 ctgcaggaga aagcgcttaa gtttatggct gcagttccgg ctggtggata ttggaggaat
      241 aataaaaagt gctctatgcc caggtctctg tggctgggct gctccagcct ggcggacagc
      301 atgccttcgc tgcgatgcct gtataaccca gggactggcg cactcacagc tttccagaat
      361 tcctcagaga gagaagactg taataatggc gaacccccta ggaagataat accagagaag
      421 aattcactta gacaggccaa acttgccaat ggcacttcca gcatgattgt gcccaagcag
      481 cggaaactct cagcaagcta tgagaaggaa aaggagctgt gtgtcaagta ttttgagcag
      541 tggtcagagt ctgatcaagt ggaatttgta gaacacctta tatcccaaat gtgtcactac
      601 cagcatgggc acatcaactc ctacctaaaa cctatgctgc agagggattt cataactgca
      661 ctgccagcac ggggtctgga ccacatcgct gagaacattc tgtcatactt ggacgccaag
      721 tcactgtgtg ctgctgagct cgtgtgcaag gaatggtacc gcgtgacgtc ggacggcatg
      781 ctgtggaaaa agctcatcga gaggatggtc aggacggact ctctgtggcg aggcctggca
      841 gagcgcagag gctggggaca gtacttattc aaaaacaaac ctcctgatga gaacgctcct
      901 cccaactcct tttatagagc gctttatcct aaaatcatac aagacattga gacaatagag
      961 tccaattgga gatgtgggcg acatagttta cagagaatcc actgccggag tgaaacaagt
     1021 aaaggggttt actgtttaca gtacgacgac cagaagatag tcagcggcct tcgagacaac
     1081 accatcaaga tctgggataa aagcacactg gaatgcaagc ggattctcac gggccacacg
     1141 ggctccgtcc tgtgtctgca gtacgatgag agggtgatca tcacaggctc ctcagactcc
     1201 accgtcagag tgtgggatgt aaatgcaggt gagatgctaa acacattgat tcaccactgt
     1261 gaagccgttc tgcacctgcg cttcaataat ggcatgatgg tgacctgttc caaagaccgt
     1321 tccatcgctg tgtgggatat ggcttcccca actgacatca ccctcaggag ggtgctggtg
     1381 ggacaccgag ctgcggtcaa tgttgtagac tttgatgaca agtacatcgt ttctgcctct
     1441 ggagatagaa ccataaaggt gtggaacaca agtacctgtg aattcgtaag gaccctaaat
     1501 gggcacaagc gtggcatcgc ctgtttgcag tacagagaca ggctggtggt gagcggctcc
     1561 tctgacaaca ccatcaggct gtgggacata gagtgtggag catgcctgcg agtgttggag
     1621 ggccatgagg agttggtacg ctgcattcga tttgataaca aaaggatagt gagcggagcc
     1681 tatgatggga aaattaaagt gtgggatctt atggctgctt tggacccgcg tgctccagca
     1741 gggactctct gtctgcggac acttgtggag cattctggaa gagttttccg cctccagttt
     1801 gatgaattcc agattgtcag tagttcacat gatgacacaa ttctcatctg ggacttcctg
     1861 aatgatccag ctgctcacgc tgaaccgccc cgctcccctt ctcggacata cacctacatc
     1921 tccagataaa taacccaaca ctggcctcat aattgcccag gactcgttaa tgttgcagta
     1981 tttaacagac ctgccaagac caggatgaac aacaatcaaa ctcctacccg gattcccgga
     2041 cggatgagcg aggagcaggg ctttgagact cctgttggga cacagtcggt cagcagccga
     2101 ccaggacggc ctgctcggca ccggctgcct cagtgctgct atcagaagat gtctttatct
     2161 tgtgtgaatg attggaactt ccaagcctcc ctccccttcc cttccccttc ctccctgcac
     2221 ctgtttccct cccattgggt tccagacaaa gatgacttat aaatatattt agtgttttgc
     2281 cagaatctct cttgctttgc cgttaagcag aagaactagt ttccccacct ggcccacttc
     2341 taggggacag gggctgcagc ttccaggcag agactgcctg gcctcctcct gttaactgca
     2401 ggagtgtcca gcatctggcc agagcagtcc cagccactgc gtgggaggag acagctgcct
     2461 acacatcttg gaggggagag agagagagag agagaggaga ggcgcacaca cactggaaga
     2521 tctgcactgc tgcctccctc cattgtctgg gtgtctgtcc ctcttccctg ctcccatact
     2581 ccatcttgag cctgagaagg tgtgcaaaga gagtcctcag ctagcatgag gcggatcacc
     2641 tagacaatgt gacacttgca agagttgagt tcgtccttat ttccagccca ggcttttgct
     2701 gcaagtgacc aacctggggc accagtggat ttgtgaccat gacattggtc agtcacattt
     2761 gcagctttct ccttccctgt gccctgggga agggcaggaa tgtcctgggc accatcagtg
     2821 ctgtgtctgc ttcggactca gcggtcttcc tcggtcccat gtagagtgga gaggagctgc
     2881 tgattgcatt cctctcatta acaattagat gtgtaataaa aagcattgtg cttcatctta
     2941 aatcactggc gaggcttggc ctgcacaaag gcttggaata gccagcacca ggcaccactg
     3001 cactctgctc tgtggctcga atttgttcct cgactgagct ggaaagcacc cagggacctg
     3061 taactgccca ccaagagcat agtagcctaa gagatggtca ggagagaaac agattctggg
     3121 ttaggccagt aaatgtcagc atctcagcct tccactgcag gtccttatgc cgagtgcttg
     3181 cagaaaggcg aggctgccag aggggatcag ggtgaagctt ggcacacagg gtttactgat
     3241 aagcaaaagc tgccttctct ttctttcctt ctcccagcct tatttgctgt ccactttccc
     3301 cagccagtta gctggcagtc agtgatgaca taagcggctg cacttccaca agggcagagc
     3361 taagcaggtc gtgtacacgg ctgcactggg cccctgccag taggctccag atgcagacac
     3421 tcatggccaa acctggaagt acttgaactg aaaaccaact tagttacccc acagcatgca
     3481 cagggcctgc caaggggtga cttaggccac agtgcagcct cggtttcact tggaagccaa
     3541 gcagtcagac tgtcatgctg ttcctaaccg tgcatttgag ttgaagaaaa ccaactgaac
     3601 aagctgctta aaatagaacg gggcccatca catgtggtca cagacagacc accttcacct
     3661 gagcaggaag tggggccctt tcacaactgg ccctcagata gaccaccttc acttcactgg
     3721 tttgcaagtt accccttgcc caacgtgtcc cactagtgaa tgccattacg tgctgggtca
     3781 ggtcacgtgt acagattgcc ttccctgtgt tagccgcatt tctcctttcc caaccaacca
     3841 cgtgttgcag acttgtctgg ttaaccccgc cgagtccctt gtctgttatg ttgactgtta
     3901 atagtgaagg actttgctgc aaaacgggtc agacatgaag agacctaagc tgcttcaaga
     3961 aatggtctag tggccacaag tctaccagcc cttcttcagt tccatgctgc tttaagaagt
     4021 taggagctgg aggacatctg cctagcgtgg atgcccagga ttagggggca gtgtgggcac
     4081 tgctgcagac tggttggtgc cagggctgtg ctctcctccc aggttcagct ggagggtgct
     4141 gttctgaagc cagccgggaa gtgtggctgc ccgttgtctc aggctggggt ggacgctgct
     4201 cactgaagcc catagagtgg ttaagctctt tctgcagctt gccctcgcca ctgctgatgg
     4261 aaatgggaac aaagttaagt ggtctgagca cctgaattgc tcgcatttct cagctctggg
     4321 ggtcatttac cagttcattg tagaagaaac aatcaggtaa gaagttcatt tccagagaag
     4381 gtgaaccccg cttaccatct ctgcatgatt tcagtgggaa ttgattatca ctgatcccca
     4441 actgggcgag atgtaaagtt tgaccttttt aaaaagaaaa gagaaacaaa gaacatctcc
     4501 acacatttaa aggaatagta gacaagaagc ttcgggtgtc ctgtggctcg gagacgagag
     4561 gagagtctcg ggtcaggctt ggttttttgt ttgtttgttt tgttttgttt taactaaaat
     4621 ctactttcca aaataaaggc tgcaagacct tccctactga caggctgagg tccttaggca
     4681 gctgagtaaa gtgcacaggg tgcctgctgg agagcatggc ttctgtcaca ctgacagtgt
     4741 ctggacaagg ccaacccatg ccttgctgct catgtgggag agggagagag agggagagag
     4801 agagagagag agaacgcgcg ctgttttgcc tctgctgcta gggatgtcct ttcctttgaa
     4861 gtatagttag aaagtgggtg tgaattatgg atggaaagcc ttttacactt gtcccttggc
     4921 taaattcttt ctgatttgtc ctaactttag agacagaaac tgtttggaac tctgttgaca
     4981 agtaataaag tctggctctc agtagcttgt tttggaactg aaaatgacat cgaggctcct
     5041 aaatcattct gtaaggggaa aaaaaaaaat tttttttaac aatccaaagc tgcagagaag
     5101 gctgtgtgca tccatccagt cccttgcctt gccttgcctt gccttgcctt gccttgcctt
     5161 gccttgcctt gccttgcctt gccttgcctt gccttgcctt gccttgcctt gccttgccgg
     5221 ctcctggtct gagtggctga ggttgatctg cttgcttagc agttgtccag agtggagaat
     5281 actgaaagta attagggctg tggtggtgtt aattgtctta gcatcttccc tttgagctaa
     5341 attgtgatac cttcctgtcc tgaatctgaa ggaaggaggc ccactcagat tagtgcaggc
     5401 ctgcgggcta ggtgtgttct gaaggatgcc ttcaggtgga gatgaagcat gcaggtaccc
     5461 agccctgtgg ctgcaccctt tggtgatggc cagtttacag tggaactgca ggccacacta
     5521 atctctatcc ccgtttggtt acactcagca gtttcgaatg caccagagac ctccaatagg
     5581 gtcaatccta gactcacgca catgacctgt ggcagtgtag agcccacgta accacagtga
     5641 gtgcagtcag tacgagaggg agccatcccc ggaataaagg tgagctttgc tgctggctgt
     5701 cttgaagcgt tagttcacgg aggatatcag aatccttaaa gccaaggaga gagaccaaag
     5761 cagggagaca gtggctactg gcttgcggga gggatggact gcgctgccgc ccaggaccct
     5821 ccatggctag caaccctgtc tcaaaacaaa cgacactggc ccagtgcctg tggcctaaaa
     5881 ttcccagaga cagttgactt cccaaacact cgcttctcta caaactcagt tatctgactt
     5941 agcttctaag taggagggtg gggatggtat gtgtccctca gacatttaag gaaaggtcca
     6001 ataggttcga tctctgggta tcaaggaaac cgataccttc ccaaagcggt gacccttaaa
     6061 ccctagcaaa ctgactgagg gtgttcagtg gacgccagca tgggaacagg cctggcaaca
     6121 agtgtgagcc agggcttttg cttgttcgct ttttgttttc tagattctcc agtgctgacc
     6181 gctttaattt ttgtgattat gttgtagtgg tgtgtagtca atgtaccaat atgttcacaa
     6241 gttaggatga tggtaatagt gtgttttggt tttttaactg tttggggaaa aaaagtaaat
     6301 tacaaataca agattaaagc gaa
//
