LOCUS       NM_030747               1620 bp    mRNA    linear   ROD 14-OCT-2021
DEFINITION  Mus musculus butyrophilin-like 6 (Btnl6), mRNA.
ACCESSION   NM_030747
VERSION     NM_030747.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Jandke A, Melandri D, Monin L, Ushakov DS, Laing AG, Vantourout P,
            East P, Nitta T, Narita T, Takayanagi H, Feederle R and Hayday A.
  TITLE     Butyrophilin-like proteins display combinatorial diversity in
            selecting and maintaining signature intraepithelial gammadelta T
            cell compartments
  JOURNAL   Nat Commun 11 (1), 3769 (2020)
   PUBMED   32724083
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  AUTHORS   Di Marco Barros R, Roberts NA, Dart RJ, Vantourout P, Jandke A,
            Nussbaumer O, Deban L, Cipolat S, Hart R, Iannitto ML, Laing A,
            Spencer-Dene B, East P, Gibbons D, Irving PM, Pereira P, Steinhoff
            U and Hayday A.
  TITLE     Epithelia Use Butyrophilin-like Molecules to Shape Organ-Specific
            gammadelta T Cell Compartments
  JOURNAL   Cell 167 (1), 203-218 (2016)
   PUBMED   27641500
REFERENCE   3  (bases 1 to 1620)
  AUTHORS   Lebrero-Fernandez C and Bas-Forsberg A.
  TITLE     The ontogeny of Butyrophilin-like (Btnl) 1 and Btnl6 in murine
            small intestine
  JOURNAL   Sci Rep 6, 31524 (2016)
   PUBMED   27528202
  REMARK    GeneRIF: data show that the expression of Btnl1 and Btnl6 is
            delayed in the murine neonatal gut and that the appearance of the
            Btnl1 and Btnl6 proteins in the intestinal mucosa associates with
            the expansion of Vgamma7Vdelta4 TCR IELs
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1620)
  AUTHORS   Stammers M, Rowen L, Rhodes D, Trowsdale J and Beck S.
  TITLE     BTL-II: a polymorphic locus with homology to the butyrophilin gene
            family, located at the border of the major histocompatibility
            complex class II and class III regions in human and mouse
  JOURNAL   Immunogenetics 51 (4-5), 373-382 (2000)
   PUBMED   10803852
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT009767.6.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849380
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 18.1 cM"
     gene            1..1620
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /note="butyrophilin-like 6"
                     /db_xref="GeneID:624681"
                     /db_xref="MGI:MGI:1932038"
     CDS             1..1620
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /codon_start=1
                     /product="butyrophilin-like 6 precursor"
                     /protein_id="NP_109672.1"
                     /db_xref="CCDS:CCDS50078.1"
                     /db_xref="GeneID:624681"
                     /db_xref="MGI:MGI:1932038"
                     /translation="MENHRKPSLLFHVSCLFVLIQLLSWVTTKEFQVFGPSDPIVAAP
                     GGEAILPCSVIPAMNVENMEELRWFRSRFSAAVLVYRDQEEQKREQLPEYSQRTSLVK
                     EQFHQGTAAVRILNVQAPDSGIYICHFKQGVFYEEAILELKVAAMGSVPEVYIKGPED
                     GGVCVVCITSGWYPEPQVHWKDSRGEKLTASLEIHSEDAQGLFRTETSLVVRDSSVRN
                     VTCSTFNPILGQEKAMAMFLPEPFFPKVSPWKPAFFVTLTMMGLLVLGTSYLFRRERS
                     ARLIVQELTGNLQRVEDNKAEEDTVRTIDALMVELAQRKAAYRAAWRKAQLYADWRKE
                     QFQAWTFTLDPASAHTNLAISQDRLTVTRKDFTRCLEDLSCVLGIRGISSGRYYWEVK
                     LTNIEGSKWILGVCREGVVRKNFYFETPRKGFWTVGQSSKGHWAYIDSGRTSLSVRQA
                     PKSVGVFVDYTEGDISFYNMSDMSHMFSFPKASFSGTLFPYFRLRSGNVSMIINSMEC
                     ASESSEGEEGRRGRKRSRRGGRGGGGRMGRS"
     exon            1..85
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /inference="alignment:Splign:2.1.0"
     exon            86..436
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /inference="alignment:Splign:2.1.0"
     exon            437..718
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /inference="alignment:Splign:2.1.0"
     exon            719..913
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /inference="alignment:Splign:2.1.0"
     exon            914..934
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /inference="alignment:Splign:2.1.0"
     exon            935..961
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /inference="alignment:Splign:2.1.0"
     exon            962..988
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /inference="alignment:Splign:2.1.0"
     exon            989..1015
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /inference="alignment:Splign:2.1.0"
     exon            1016..1620
                     /gene="Btnl6"
                     /gene_synonym="EG624681; Gm6519; NG13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggaaaatc accgcaagcc atctctgctc ttccatgtct cctgcctgtt cgtccttata
       61 cagctgctta gctgggtgac cacaaaggag ttccaggtct ttggtccttc agaccccatt
      121 gtggctgcac caggtgggga agccatcctt ccctgctccg tgattccagc catgaatgtg
      181 gagaacatgg aggagttgag gtggttccgc agcagattct cagcagcagt acttgtctat
      241 cgggaccaag aggaacagaa aagagagcag ttgcctgagt attcacagcg cacctctctg
      301 gtgaaggagc agttccatca aggcacagct gctgtgagga tcctaaatgt ccaggcacca
      361 gatagtggga tatacatctg ccacttcaaa cagggagtgt tctatgaaga ggccatcttg
      421 gaactgaagg tggcagcaat gggctctgtc cctgaagtgt acatcaaagg tccagaagac
      481 ggtggagtat gtgttgtgtg cattacttca gggtggtacc cagagcctca ggtgcattgg
      541 aaagactcca gaggagagaa actcacagca tccttggaga tccacagtga agatgctcaa
      601 ggactgttca gaacggagac ctcgctggtg gtgagagaca gctctgtgag gaacgtcacc
      661 tgctccacct tcaatcccat cttgggtcag gagaaagcca tggccatgtt cctcccagag
      721 cccttctttc ccaaggtctc tccctggaag ccagcatttt ttgtgaccct gaccatgatg
      781 ggacttctag tcttagggac aagctatctt ttcagaaggg aacgttctgc aaggctgatc
      841 gtgcaggagc taacggggaa tcttcaacgt gtggaggata ataaggcaga ggaggatact
      901 gtgaggacta ttgatgcact catggtggag cttgctcaaa ggaaggcagc ttacagggca
      961 gcctggagga aggcccagct gtatgcagat tggcgcaagg aacaattcca ggcctggact
     1021 ttcactctgg atccagcctc tgcccacacc aaccttgcca tctcccagga taggctgact
     1081 gtgacccgga aggatttcac taggtgcttg gaggacctct cctgtgtgtt aggcatcaga
     1141 ggcatctctt ctggaagata ttactgggag gtgaagctaa caaacataga aggcagcaaa
     1201 tggattctgg gtgtctgtag ggaaggtgtg gtcaggaaaa acttttattt tgagactcct
     1261 cgtaaggggt tttggactgt ggggcagtct agtaagggac attgggccta tattgactct
     1321 gggaggactt cattatctgt caggcaagct ccgaagagtg tgggggtgtt tgtggactac
     1381 actgaaggtg acatctcctt ctataacatg agtgacatgt cccacatgtt ctccttccct
     1441 aaggcttcct tctctgggac tctttttcca tacttcaggc ttaggagtgg aaatgtttca
     1501 atgattatca actccatgga atgtgcgtct gagagtagtg agggagaaga gggaaggaga
     1561 ggaaggaaaa gaagtagaag gggaggaagg ggaggagggg gaagaatggg aagaagttag
//
