LOCUS       NM_001384196            2616 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus BTB domain containing 19 (Btbd19), mRNA.
ACCESSION   NM_001384196
VERSION     NM_001384196.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2616)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL671866.8.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.743047.1,
                                           SRR13422589.293731.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164137 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-330               AL671866.8         134110-134439
            331-532             AL671866.8         135628-135829
            533-586             AL671866.8         135986-136039
            587-646             AL671866.8         137490-137549
            647-715             AL671866.8         138286-138354
            716-847             AL671866.8         138439-138570
            848-973             AL671866.8         138672-138797
            974-2616            AL671866.8         138907-140549
FEATURES             Location/Qualifiers
     source          1..2616
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 53.41 cM"
     gene            1..2616
                     /gene="Btbd19"
                     /gene_synonym="9530048O09Rik"
                     /note="BTB domain containing 19"
                     /db_xref="GeneID:78611"
                     /db_xref="MGI:MGI:1925861"
     exon            1..330
                     /gene="Btbd19"
                     /gene_synonym="9530048O09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             245..1108
                     /gene="Btbd19"
                     /gene_synonym="9530048O09Rik"
                     /note="BTB (POZ) domain containing 19"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein 19"
                     /protein_id="NP_001371125.1"
                     /db_xref="GeneID:78611"
                     /db_xref="MGI:MGI:1925861"
                     /translation="MENPGLVVRGQAAPFSTALRSLINNPQYSDICFVVGQERQEVFA
                     HRCLLACRCNFFQRLLGPGVPSPVVLSTVPAEAFLAVLEFLYTNSVKLHQHSVLEVLT
                     TAVEYGLEELRELCLEFVVKVLDVELVCEALQVAVTFGLGSLQERCIAFIEAHSQEAL
                     RTRGFLELSATALLPVLRSDKLCVDETELVQAARSWARVGAAVLEQPVAEVAAPVVRE
                     LRLALLAPAELSALEEQNRREPLIPVEQIVEAWKCHALRRGDAARSAPCRRRRGTRPR
                     DHHRFLDLRFK"
     exon            331..532
                     /gene="Btbd19"
                     /gene_synonym="9530048O09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            533..586
                     /gene="Btbd19"
                     /gene_synonym="9530048O09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            587..646
                     /gene="Btbd19"
                     /gene_synonym="9530048O09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            647..715
                     /gene="Btbd19"
                     /gene_synonym="9530048O09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            716..847
                     /gene="Btbd19"
                     /gene_synonym="9530048O09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            848..973
                     /gene="Btbd19"
                     /gene_synonym="9530048O09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            974..2616
                     /gene="Btbd19"
                     /gene_synonym="9530048O09Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atccaccacc agcctctccc gggatcatag gcctttctag ccccagcttc ttctctgggt
       61 cctgtctgca tctgcatccc tttcctgaac ctcaggcctt ctttaaggac ctgggccttt
      121 ctgctcctat attttagctc ctcggcaaac aggcctccag ctcctgccct ccctctcagg
      181 tctttcttgg cctggctagg ccttctagac tgttccaccc tttaacctac tgcccactgc
      241 acttatggag aacccaggac tggtggtacg tgggcaggct gcaccctttt ccacagcact
      301 tcgaagcctc atcaacaacc cccagtacag tgatatttgc tttgtggttg gtcaagaacg
      361 gcaagaggta tttgcccacc ggtgcttgtt ggcctgtaga tgtaacttct tccagagact
      421 tttgggccct ggggtaccta gtcctgtggt gctaagcact gtgcctgccg aagccttctt
      481 agctgtgctg gagttcctat acaccaacag tgtcaagctg caccaacact ctgtgctgga
      541 ggtgctgaca acagctgtgg aatatgggct ggaggaactt cgagagctct gcctggagtt
      601 tgtggtgaag gtgttggatg tggagctggt ctgtgaggct ctgcaggttg ctgtaacctt
      661 tggcctgggg tcactacagg agcggtgcat agcctttata gaagctcaca gccaggaggc
      721 gctccgcacc cgtggctttc tggagctgtc cgccaccgcg ctgctgcctg tgctacgcag
      781 tgacaagctc tgcgtggatg agactgagct agtccaggca gcccgaagct gggcacgcgt
      841 gggcgccgcg gtgttagagc aacccgtggc tgaggtggca gctccagtgg tccgagagct
      901 gagactggct ttgcttgccc cggcggagct aagcgccctg gaagagcaga accgacggga
      961 accgctcatc ccggttgaac agattgtgga ggcatggaag tgtcacgccc tacggagagg
     1021 agatgcggcc cggagcgcgc cgtgccgccg gcggaggggt acccggcccc gggatcacca
     1081 tcgctttctg gaccttcgtt tcaaatgatc cacttccgga ccttcccagg aagttgacta
     1141 catcccaaac tacagctccc gaggtgctct gcgttggagg tgggcttccg ctcccagcaa
     1201 gctcagccgc cggatacggg aaggaccgct ctgcgtctag agtgaaacct aagcctctgt
     1261 ggaagagtag ggattgcgca atgggcccaa agttgtggct tgggtgatgt cctgagaccg
     1321 gaaacgaggg tggcctttgt tgcataagct catgcggcat tctgcaagtc gatcattcct
     1381 ctacgcccct ctactcggat gacgcgatct ctatgtagct catcctcttt aacaaatcag
     1441 cttcaggctc agcgcaaatt cgagcttctc accatctttc ccaaccctgg aaatagtgtt
     1501 aatcttttgt gcggatctgg aacccggacc tcattcttgc ctacctcatg ccttttctcc
     1561 cttctagggt ctcttctgct gttaccctag ccagtgcccc tcactccttt ctctgtcagg
     1621 ggacagtatc catccctatg atggtcccat cgctttgatt gtcaagcttt tcctcctgag
     1681 ccctttaacg tccatactgc tttccaggac agcctacaaa atttccttga gatttagcaa
     1741 tcctaaactc tgcgtttggg agttccagaa ttattggggg gtgggatggg ttgtcgacaa
     1801 tctctcactg taaccccatc tgacctagag ctatttagga cagactagct ttgaactcac
     1861 tgcgctccga ctgcctctgc ctccctggta cagagattaa aggcgtgtac tatcgctcct
     1921 aattctggct ttacataaaa atatattgct tatgaattaa agatgaatat ttgtattctg
     1981 tcaagatgga aaaggtggct gcccagtggg accactcctg gcacccttct ttggatcatg
     2041 aacactgaaa gtaatttgct gcttgcttgc ctgttccatg cttttgcttc ctttacatca
     2101 actttagaag ccatgtacta atctgtacta atactgcgct tccattagct ttgctgtatt
     2161 gtgatgaaaa ggcttttgaa attattatta ttttatttta ttttattttt ttggtttttt
     2221 tgagacaggg tttctctgtg tagccctggc tgtcctggaa ctcactttgt agaccaggct
     2281 ggcctcaaac tcagaaatcc gcctgcctct gcctcctgag tgctgggatt aaaggcgtgc
     2341 accaccacgc ccggcctcta aattattttt gggagcttgg agagtcttca gattgcttta
     2401 aagcacccat ccttttcctt gaggatagaa agcttttgtt catgcaggct gtcttctgga
     2461 catgtgttct gcgaggcaag catagcatgg cggcatacat aggtaaatgt cagcacttgg
     2521 gaagtggacg gaggaggatc agcagtttga ggctagccta ggttagttac aaggtgagac
     2581 ctgtttcaaa aaataaactg agcatgatgt tacaca
//
