LOCUS       XM_006535600            3626 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus BRO1 domain and CAAX motif containing
            (Brox), transcript variant X4, mRNA.
ACCESSION   XM_006535600
VERSION     XM_006535600.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006535600.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3626
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..3626
                     /gene="Brox"
                     /gene_synonym="0610010K06Rik"
                     /note="BRO1 domain and CAAX motif containing; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 mRNAs, 21 ESTs, 1465 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 37 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:71678"
                     /db_xref="MGI:MGI:1918928"
     CDS             730..1626
                     /gene="Brox"
                     /gene_synonym="0610010K06Rik"
                     /codon_start=1
                     /product="BRO1 domain-containing protein BROX isoform X3"
                     /protein_id="XP_006535663.1"
                     /db_xref="GeneID:71678"
                     /db_xref="MGI:MGI:1918928"
                     /translation="MGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHL
                     KESHIPKLLTPAEKGRDLEARLIDAYIIQCQAEAQEVTIARAIELKHAPGLIAALAYD
                     TASFYQKADHTLSSLEPAHSAKWRKYLHLKMCFYTAYAYCYHGQTLLASDKCGEAIRS
                     LQEAEKLYAEAEALCKEYGETKGPGPTAKPSGHLFFRKLGSLVKNTLDKCQRENGFIY
                     FQKIPTEAPQLELKANYGLVEPVPFEFPPMSAHWTPEALAAFDLTKRPKDDSVKPKPE
                     EDVKPVKEPDIRPQKDTGCSVS"
ORIGIN      
        1 ccagttaggt tgaggccgcc ccaatcctcg ggggccgcca tagctacagt ggcattcggc
       61 cttggtttgg ggaccccagg ctacatctct agggcccaga cagaagctca agaggtaaga
      121 gcagacgaag tttagagagg gtagggagac ggagagaacc gacggggccg cgacagcggg
      181 accgaacccg cccctcagag acacgctcgg ccgcctccgc agctggtgcg gtctccagtc
      241 acgtgacgcc tgctctgggc cggccccact tccggccgct ctagctcagt tatctcggtg
      301 ctaccggcgc cttccttgtc tcgctggagg actccgtccc accttccctt tccttcagca
      361 ggaagagtgg ccttacggac tctgaggtcc ccgccatcca accagagtct cagctttgct
      421 ttgcagaagt ctaatctgga agccctgcag tgtcagcacc tcaggcttct cccacagact
      481 gagcacattt tgtgaagatg acccattggt ttcataggaa cccattaaaa gctacagctc
      541 ccgtgtcttt taactactat ggcatgatca ctggtcctcc cgcttcaaag atttgcaagt
      601 ttcataaatt cagtgggtga ctctacacag gaaagcaaat tacgatacat tcagaatttc
      661 aagtggaccg atacattgca aggacacgtt ccgagtgccc agcaggatgc tgtttttgaa
      721 ctgatttcca tgggatttaa tgtagcgctg tggtacacaa aatatgcttc aagattggct
      781 ggaaaagaaa acataacaga agatgaagca aaagaagttc accgaagcct aaaaattgca
      841 gctgggattt ttaaacattt aaaggaaagt catatcccca aacttcttac accagcagaa
      901 aaggggcggg acttggaggc tcggctcatc gatgcttaca tcatccagtg ccaggccgag
      961 gctcaggaag tgacaatcgc ccgagccatt gagctgaagc acgctccggg actgatcgct
     1021 gcactcgcct atgacacagc cagcttctac cagaaagcag atcatacttt gtccagtttg
     1081 gagcctgcac actctgctaa atggagaaag taccttcact tgaagatgtg cttctacaca
     1141 gcgtatgcgt attgctacca tggccagact ctgttggcga gcgataagtg tggagaagcc
     1201 atccgatctc tccaagaagc agaaaaattg tacgcagagg cagaagccct atgcaaagag
     1261 tacggggaaa ccaaaggacc agggccgacg gccaagccgt caggacactt gttcttccgg
     1321 aagcttggga gccttgtgaa gaacaccctg gacaaatgtc agagagaaaa tggcttcatt
     1381 tactttcaaa aaattccaac agaagcccca caactggaac tcaaagcaaa ttatgggctg
     1441 gtagagcctg tgccttttga attccctcct atgagtgctc actggacacc ggaagcgttg
     1501 gctgcgtttg atctcaccaa gagacccaag gatgacagtg tcaaacccaa accggaagag
     1561 gacgtgaaac ctgtaaagga accagatatc agacctcaga aggacactgg gtgctcggtc
     1621 tcataagaat gtctgtcact cactgcaatc tctgctggtc cacaagagaa actgtggggc
     1681 ttcagttcgc cgtttctgat ttctctgaag cccacaggat aattgttagc ttcagagcaa
     1741 cttggccttt catttattta ttcttgattt ttaacataga ggcatttcat gattttgctt
     1801 ctgggctctg cttttttaat caggacaaca tttggaaggg ttgtttttta tgcctctaat
     1861 gagtatatgt gggggattgg accttttctg aactctagat agtaagtttc atgttcatgt
     1921 ttttctactt tcacagaaat gtttgttctt cttgtttgat accagaagga tgttttgaaa
     1981 agagatgggt tcacctttca tcaccacatt gtcagatccg agtctagctt agtctaggtg
     2041 gggaaacaga atcgcagtta aaatcagaaa acctcagacc aagctctttc cctgtactag
     2101 gaaatcgtgt cttcaggaat atggaagtta cgtgaaattc agcagtctgg gtctgtgccc
     2161 ctcggcctgg ctcagcagcg gagggccgtg ctctctccac ccgcactacc cacacagtgg
     2221 tggttttctt acaagtacct tttctaatga actttttact taaggggtaa agctttgtac
     2281 tagcatttag tgcttctgtg tagagagagg aagagaatgg tagtgtgttt tgaagaatta
     2341 aaatgttgca tgttgtaaag aaagccttcg taaactcaac caagataggt tgtcctgact
     2401 cacactggta attcctttgt tagaagagtt ttaagaaaat gcctttgttc cctgattttg
     2461 gtggacactg tgtttttaac atggttttct tcagtatcct atagtaatgg cttggcgtta
     2521 ggccatagtg acagaggtta ggatatagac acacaaacta tgtgtttaaa ggatttgctt
     2581 atacccacac actgggaatg atgggtgtgt gatactttac caagtaacag atgtgggtgt
     2641 atcctgcttg gttgctctcc tggggtgtta acttcctttt ctaggtgaca gattgcttcg
     2701 cataatagga ataataatgt atgtgagaac ttactgtgtg ccagacagtg tataggcaca
     2761 tacgtagacc actgcatccc tttagccacc ctgtgagaaa cacatcaatc tgcataaagt
     2821 attgaaacag gaatatacat ctcatgatga agaatgaaga gattatacct gtcaatcaag
     2881 acagtagtca ataaatcata tatcatagtt tatactcctt tgaaaagcta catataatca
     2941 ctaagggttt tttaaaaaat aatttaaaat gtgagttaca gcttgcagta tctaatattt
     3001 aagctgtagc tttcagaata cttggagtaa ctactgaatg ggcattaagt tttattttgc
     3061 tgcctatagg aaaacaatac tttattacgt tgtcaccctt cctacagagt cacttgttaa
     3121 atgccagtga ctgacaaaac taactagtta ctgacaaaac taactagtac ttgctgctgc
     3181 ctgtttatac tctgcctgta ggacttgctc tgtgtactaa ccctcattaa cctaggtagg
     3241 cacgctgcgg tttctgtgga ctcgactgcc gttcatgaaa tggaaacaca tactatgtcc
     3301 ggcgcttctg taaaggcagt aaatgcaggt gttgaaatcc atcattggcc atgttcacgt
     3361 gatcgcatga gcagtcttgt tgattgtaaa gctaacacca gaagcctcgt atacgccggg
     3421 cgcaccatga ggttccgaag cagtagcagg gattgtgggg acgctgacta taaagcactg
     3481 gcaggcaggc tgtgcagaga tgacactgga cattggtgtt gcatgtgttt cataccaggc
     3541 gaggacagct cctgtacagc tacttctgta cagtgtttat atgatttatc tttttattta
     3601 tgaaaataaa agccatttta cttaca
//
