LOCUS       NM_025686               1383 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus BRF2, RNA polymerase III transcription initiation
            factor 50kDa subunit (Brf2), mRNA.
ACCESSION   NM_025686
VERSION     NM_025686.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1383)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1383)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK012680.1.
            
            On Apr 6, 2007 this sequence version replaced NM_025686.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK012680.1, AK028228.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164143 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1383              AK012680.1         2-1384
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 15.91 cM"
     gene            1..1383
                     /gene="Brf2"
                     /gene_synonym="2700059M06Rik; 5730512K07Rik; BRFU;
                     TFIIIB50"
                     /note="BRF2, RNA polymerase III transcription initiation
                     factor 50kDa subunit"
                     /db_xref="GeneID:66653"
                     /db_xref="MGI:MGI:1913903"
     exon            1..212
                     /gene="Brf2"
                     /gene_synonym="2700059M06Rik; 5730512K07Rik; BRFU;
                     TFIIIB50"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..1321
                     /gene="Brf2"
                     /gene_synonym="2700059M06Rik; 5730512K07Rik; BRFU;
                     TFIIIB50"
                     /note="B-related factor 2; BRF2, subunit of RNA polymerase
                     III transcription initiation factor, BRF1-like"
                     /codon_start=1
                     /product="transcription factor IIIB 50 kDa subunit"
                     /protein_id="NP_079962.1"
                     /db_xref="CCDS:CCDS22211.1"
                     /db_xref="GeneID:66653"
                     /db_xref="MGI:MGI:1913903"
                     /translation="MPNGSRCPDCGSSELVEDSHYSQSQLVCSDCGCVVTEGVLTTTF
                     SDEGNFREVTYSRSTGENEQVSRCQQRDLRRVRDLCRILKLPLTFEDTAISYYQKAYQ
                     LSGIRAARLQKKEVLVGCCVLITCRQHNWPLTMGTICTLLYADLDLFSGTYMQMVKLL
                     GLDVPSLCLADLVKSYCSSFKLFQASPSVPAKYVEDKDKMLSRTLLLVELADETWLVT
                     GRHPLPIITAATFLAWQSLRPSDRLTCSLAQFCKLANVDLPYPAASRLQELLAVLLQM
                     AGQLAWLQVLKLNKRSVVKHIGDLLQHRHMLVRTAFRDGTAEVETQQQQQQQQGQGQG
                     QQDEVGDGPFDLPKRKRPASPTPLLPPCMLKPPKRTHTLPPESAVTGDEDISDSEIEQ
                     YLRTPQEVRDFERAQAASQAAMRVPNPP"
     exon            213..272
                     /gene="Brf2"
                     /gene_synonym="2700059M06Rik; 5730512K07Rik; BRFU;
                     TFIIIB50"
                     /inference="alignment:Splign:2.1.0"
     exon            273..594
                     /gene="Brf2"
                     /gene_synonym="2700059M06Rik; 5730512K07Rik; BRFU;
                     TFIIIB50"
                     /inference="alignment:Splign:2.1.0"
     exon            595..1383
                     /gene="Brf2"
                     /gene_synonym="2700059M06Rik; 5730512K07Rik; BRFU;
                     TFIIIB50"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagttctctg ggagtttgtg cctgacggcg gtaccgcagc cctggaccga ccgacgagat
       61 gccgaacgga agccgctgcc cggattgcgg ctcctccgag ctcgtggaag attcgcatta
      121 ttctcagagc cagctggtgt gctccgactg cggctgcgtg gtcaccgaag gggtcctaac
      181 taccaccttt agcgacgagg gcaacttcag ggaagtgaca tattctcgaa gcactgggga
      241 aaacgaacaa gttagtcgct gccagcaacg agatctccgt cgagtaagag acctgtgtcg
      301 gattctgaag ctgccgctaa cgtttgagga tacagcaatc tcctactacc agaaggcata
      361 tcagctgtct gggatccgag ctgccaggct gcagaagaag gaagtgttag tcggatgctg
      421 tgttttaatc acctgtcggc aacataactg gcccctcacc atgggaacca tctgcacact
      481 gctctatgcc gatctggact tgttttctgg cacctacatg cagatggtaa agctcctggg
      541 gctggatgtg ccctccctgt gcctggcaga cttggtgaag tcttactgca gcagcttcaa
      601 actgttccaa gcgtccccgt ccgtgccagc caaatacgtg gaagacaaag acaagatgct
      661 gtctcgaacc ttgctgttgg tggagctagc agatgagacg tggctagtga ctggacggca
      721 tcccttgccc atcatcactg cagccacctt cctggcatgg cagtctctgc ggccttcaga
      781 ccggctgacc tgctctcttg cccagttttg taaattggcg aatgtggacc tgccctaccc
      841 agctgcctct cgcctgcagg agctcctggc cgtgctcctt cagatggccg gccagctggc
      901 ctggctacag gttctaaaac ttaacaagcg gtcggtggtg aaacacattg gtgaccttct
      961 ccagcaccgc cacatgctgg tccgaacggc ttttcgagat ggaacagcag aagtggagac
     1021 ccagcagcag cagcagcagc agcagggaca aggacaagga cagcaggacg aggtggggga
     1081 tggtcccttc gatttgccca agaggaaacg tcccgccagt cccactcccc tcctgccccc
     1141 ctgcatgttg aagcccccca agcggaccca caccttgccc cccgaatctg cagtgactgg
     1201 cgatgaggat atttcagata gtgaaataga gcagtatttg cgcacccctc aggaagttag
     1261 agactttgag agagcccaag ctgctagcca ggcagccatg cgtgtcccta accctccctg
     1321 atgcacgttc tttaaggtgt cttcagttct gactgcaatt tattaacagg cctgttgtgt
     1381 tgc
//
