LOCUS       XM_030254060            4788 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus bromodomain, testis-specific (Brdt),
            transcript variant X7, mRNA.
ACCESSION   XM_030254060
VERSION     XM_030254060.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4788
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..4788
                     /gene="Brdt"
                     /gene_synonym="7420412D09Rik; Brd6; Fsrg3"
                     /note="bromodomain, testis-specific; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 22 ESTs, 197 long SRA reads, 18 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:114642"
                     /db_xref="MGI:MGI:1891374"
     CDS             386..3253
                     /gene="Brdt"
                     /gene_synonym="7420412D09Rik; Brd6; Fsrg3"
                     /codon_start=1
                     /product="bromodomain testis-specific protein isoform X3"
                     /protein_id="XP_030109920.1"
                     /db_xref="GeneID:114642"
                     /db_xref="MGI:MGI:1891374"
                     /translation="MSLPSRQTAIVNPPPPEYINTKKSGRLTNQLQFLQRVVLKALWK
                     HGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFS
                     NCYLYNKTGDDIVVMAQALEKLFMQKLSQMPQEEQVVGGKERIKKDIQQKIAVSSAKE
                     QIPSKAAENVFKRQEIPSGLPDISLSPLNMAQEAPPICDSQSLVQITKGVKRRADTTT
                     PTTSIAKASSESPPTLRETKPVNMPVKENTVKNVLPDSQQQHKVLKTVKVTEQLKHCS
                     EILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYKDAY
                     EFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKIPDEPIESMHACHLTTNS
                     AQALSRESSSEASSGDASSEDSEDERVQHLAKLQEQLNAVHQQLQVLSQVPLRKLKKK
                     NEKSKRAPKRKKVNNRDENPRKKPKQMKQKEKAKINQPKKKKPLLKSEEEDNAKPMNY
                     DEKRQLSLDINKLPGDKLGRIVHIIQSREPSLRNSNPDEIEIDFETLKASTLRELEKY
                     VLACLRKRSLKPQAKKVVRSKEELHSEKKLELERRLLDVNNQLNCRKRQTKRPAKVEK
                     PPPPPPPPPPPPPPPELASGSRLTDSSSSSGSGSGSSSSSSGSSSSSSSSGSASSSSD
                     SSSSDSSDSEPEIFPKFTGVKQNDLPPKENIKIQSSVQDITSAEAPLAQQSTAPCGAP
                     GKHSQQMLGCQVTQHLQATENTASVQTQPLSGDCKRVLLGPPVVHTSAESLTVLEPEC
                     HAPAQKDIKIKNADSWKSLGKPVKASSVLKSSDELFNQFRKAAIEKEVKARTQEQMRK
                     HLEHNAKDPKVSQENQREPGSGLTLESLSSKVQDKSLEEDQSEQQPPSEAQDVSKLWL
                     LKDRNLAREKEQERRRREAMAGTIDMTLQSDIMTMFENNFD"
ORIGIN      
        1 cacgtggcag accctggcca atcagcaggc tgctcgcggg tgagtcccat aaaggcgcca
       61 gtcgctggct gctgacagcc gccatccggg cgagagctgg cggccaccgg tggagaaccg
      121 ggagcgacgg tcctgcactg cttcatctag tgcaaactga aagggtgatc ggataaggcc
      181 ctttcctaag aggaatttgt agacttttcc tgctaagacc tcaatttgta tttttgaaga
      241 acagaaagaa attctgtgac gtgttgaaat aatttaaacc atctaagacc aagacacaca
      301 taatgaagca atgcatacta tttatataaa aaaggacatg tcctcttaga caactttaaa
      361 ataccaggat ccgaagtggt tgagaatgtc tctgccaagt cgacaaacag ctattgttaa
      421 cccccctcca ccagagtaca taaacactaa gaagagtggg cggttgacga atcagctgca
      481 gttcctacag agggttgtgc tgaaggccct gtggaagcac ggcttctctt ggcctttcca
      541 acagccggtg gacgccgtga aactaaagct gcctgactat tacaccatca taaaaacccc
      601 aatggattta aatacaatta agaagcggtt ggaaaataag tattatgaga aggcttccga
      661 atgcatagaa gacttcaaca caatgttctc aaactgctac ttatacaaca agactggaga
      721 tgacattgtt gttatggccc aagctctaga gaagttattt atgcagaaat tatctcagat
      781 gccacaagaa gagcaagttg tgggtggtaa ggagagaata aagaaagata tccaacaaaa
      841 gatagcggtt tcctctgcta aggaacaaat cccctccaaa gcggcagaga atgtctttaa
      901 gcggcaagag attccttctg ggcttcctga catctctctc tcgcccttaa acatggcaca
      961 agaagctccc ccgatctgtg actcgcagtc tctggtccaa attacaaagg gtgtgaagag
     1021 gcgagcagac acaacaactc ctaccacttc catagctaaa gcaagtagcg aatctcctcc
     1081 gacacttaga gaaacaaagc cagtgaacat gccagtaaaa gaaaatacag taaagaacgt
     1141 tttgccagac tctcagcaac aacacaaagt tttaaaaaca gtcaaagtaa cggagcaatt
     1201 aaagcactgc agcgagattc ttaaagaaat gcttgccaag aaacatttgc cgtatgcatg
     1261 gcccttctat aatcctgtgg atgctgatgc tttgggactc cacaactact atgacgttgt
     1321 caaaaatccc atggatctcg gaacgatcaa ggggaaaatg gacaatcaag aatataagga
     1381 tgcatatgaa tttgctgcag atgtcagact gatgttcatg aactgttaca agtataatcc
     1441 tcccgatcat gaagttgtgg cgatggctcg gacccttcag gatgtttttg aactacattt
     1501 tgccaagatt cccgatgaac ctattgagag tatgcatgca tgccacctta caacaaacag
     1561 tgcacaagcc ctcagcagag aaagcagcag cgaggcctcc tcgggggacg cctcttctga
     1621 agactctgag gatgaacgag tgcagcatct tgccaagctt caggagcagc ttaatgctgt
     1681 tcatcagcag ctgcaagttc tgtcccaagt tccattacgt aagctgaaga aaaagaatga
     1741 gaagtccaaa agggcgccaa aaaggaaaaa ggttaataac agagatgaaa acccaaggaa
     1801 aaagcctaag caaatgaagc aaaaggagaa ggccaaaatc aatcaaccaa agaagaagaa
     1861 gccgcttttg aaatcggaag aggaagacaa tgcgaagcct atgaactacg atgagaaaag
     1921 gcagctgagc ttggacataa acaaactgcc tggagacaag cttggtcgaa tagttcacat
     1981 aatacagtca agggagcctt ccctgagaaa ctccaacccg gacgagatcg agatcgactt
     2041 tgagaccctg aaggcatcca cacttagaga actggagaag tatgtcctgg cctgtctgag
     2101 gaagaggtcg ctgaagcccc aagcaaagaa ggttgtcagg tctaaggagg agctccattc
     2161 tgaaaaaaag ctggagctgg agaggcggtt gctggacgtc aacaatcagc tgaattgtag
     2221 gaaacggcaa acgaaacgtc cagcaaaagt ggagaagccg cccccgcccc cgcccccgcc
     2281 cccgcccccg ccgcctcccc cggagctggc cagtgggtct cgcctgaccg acagcagcag
     2341 cagcagcggc agcggcagcg gcagcagcag cagcagcagc ggcagcagca gcagcagcag
     2401 ctcctcgggg tccgcgagca gcagcagcga ctcgagctcc tccgacagca gcgattctga
     2461 accagaaata tttcctaaat ttactggagt aaaacagaat gatttacctc caaaagaaaa
     2521 tataaagata caatcttctg tgcaagacat aacctctgct gaagctcccc ttgctcagca
     2581 gagcacagca ccatgcggag ccccagggaa gcactcccag cagatgcttg gttgccaagt
     2641 gacacagcat ctgcaggcca cagagaacac tgcatctgtg cagactcagc ctctttcagg
     2701 tgattgcaag cgagtattgc ttggcccccc tgtggtgcac acctctgctg agagcctcac
     2761 agtgctggag ccagaatgcc atgctcccgc gcagaaggat ataaagatta agaatgcaga
     2821 ctcttggaaa agtttaggga agccagtgaa agcatcaagt gtactgaagt cttcagatga
     2881 gcttttcaac cagtttagaa aagctgcaat agaaaaggag gtaaaggccc ggacacagga
     2941 gcagatgcgg aaacacctgg agcataatgc gaaggaccca aaagtatctc aagaaaatca
     3001 gagggagcct ggaagtggat tgactctaga atctttatca agtaaagtgc aagataagtc
     3061 tcttgaagaa gatcagagtg aacagcagcc accgtcggaa gctcaagacg taagcaagct
     3121 ctggcttctc aaagaccgga atctagcgag ggagaaagag caagagcgca ggagaagaga
     3181 agcaatggcg ggtaccattg atatgactct tcaaagtgac attatgacaa tgtttgaaaa
     3241 taactttgat taaaactcag tttgtaaatt aaccctcaac tttaaatgaa aggtaaaagt
     3301 gtttacagtg ggcgtggtta aagtggttac tttaaacacc agaatgtcaa tcactgattg
     3361 tgttctgact gccctaaata atttttcatt tacattttaa taaatatgtt cttttaatga
     3421 cataattgat aaaatgtttt ataattttga cctctgaaag tggatagatt ttattcatcc
     3481 taaagaggac tgtcagtgat gtaatatagt cctgatctaa gtctaaaagg gatcatcaga
     3541 ttgaaaacaa atgaagaata cataaaagta tataaaacac gttttgttga gattttaact
     3601 tttgtttttt gtctaaacct gtttgttggt tagttggttt gtgtccttgt ttgagacagg
     3661 gtctcatata ctcaggctgg ctttggtgaa ctcaacatgt agccaaggct ggccttgatc
     3721 tcctgattct cctgccctca gctctcaagt actggactcc agaagtgtgt cttcatgcct
     3781 ggctgagttg ttaacttttc aaagagatat gtgtctgctg tcagaattgt aacagaactt
     3841 ctaacaagaa tacttggttt ccatgtgagt cacagtgtgt cagattctct gctagttcca
     3901 tgtttaaatt ccatactgcc ttttgtttta aagtaatatt agctatgatt tgaaaggtgt
     3961 taaattttaa gcaaagtaat agtaaatatt gtgtatacaa gcttctgtgg gaatgtgtca
     4021 gacatttctt aaaatgtgta ggtgatagca atgaatattt gcctaaccag gggaaattat
     4081 agcctatgaa acattgatgt tttgtcattt ttcaaactgc atgcatgtct aaccatatgt
     4141 aatctttttt aaaattttaa acctttgaac atttgaaata taacctgatt aaggcaatgc
     4201 tgtgatctaa agtacaaact cagtgtgtgt ccagacaggg aagtgcacac ctgctgtcca
     4261 gacagggcag tgcacacctg ctatgcagac agggcagtgc acatctgctg tccagacagg
     4321 gcagtgcaca cctgctatgc agacagggca gtgcacacct gctgtccaga cagggcagtg
     4381 cacacctgct atgtagacag ggcagtgcac acctgctgtc cagacagggc agtgcacacc
     4441 tgctgtccag acagggcagt gcacacctgc tgtccagaca gggcagtgaa cacctgctgt
     4501 ccagacaggg cagtgcacac ctgctgtaat tccagtattt ggggggcaga ggcagagaag
     4561 gagtcactgc tgataactca agaccagcct ggttcacata gcaatcttca gattctggtc
     4621 atagccagac ctccttgatt gagaagaacc aagaaagaga gagagaaaga gagtaagaag
     4681 atggtattgc tttcaggaaa cattgctttc aggaaacaac cagaattaaa gtgatagata
     4741 ttttgttgta cctattttct actttttaat taaaaacttt atatgata
//
