LOCUS       XM_011249398            4861 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus bromodomain, testis-specific (Brdt),
            transcript variant X2, mRNA.
ACCESSION   XM_011249398
VERSION     XM_011249398.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_011249398.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4861
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..4861
                     /gene="Brdt"
                     /gene_synonym="7420412D09Rik; Brd6; Fsrg3"
                     /note="bromodomain, testis-specific; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 20
                     ESTs, 133 long SRA reads, 18 Proteins, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:114642"
                     /db_xref="MGI:MGI:1891374"
     CDS             441..3326
                     /gene="Brdt"
                     /gene_synonym="7420412D09Rik; Brd6; Fsrg3"
                     /codon_start=1
                     /product="bromodomain testis-specific protein isoform X1"
                     /protein_id="XP_011247700.1"
                     /db_xref="GeneID:114642"
                     /db_xref="MGI:MGI:1891374"
                     /translation="MSLPSRQTAIVNPPPPEYINTKKSGRLTNQLQFLQRVVLKALWK
                     HGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFS
                     NCYLYNKTGDDIVVMAQALEKLFMQKLSQMPQEEQVVGGKERIKKDIQQKIAVSSAKE
                     QIPSKAAENVFKRQEIPSGLPDISLSPLNMAQEAPPICDSQSLVQITKGVKRRADTTT
                     PTTSIAKASSESPPTLRETKPVNMPVKENTVKNVLPDSQQQHKVLKTVKVTEQLKHCS
                     EILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYKDAY
                     EFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKIPDEPIESMHACHLTTNS
                     AQALSRESSSEASSGDASSEDSEDERVQHLAKLQEQLNAVHQQLQVLSQVPLRKLKKK
                     NEKSKRAPKRKKVNNRDENPRKKPKQMKQKEKAKINQPKKKKPLLKSEEEDNAKPMNY
                     DEKRQLSLDINKLPGDKLGRIVHIIQSREPSLRNSNPDEIEIDFETLKASTLRELEKY
                     VLACLRKRSLKPQAKKVVRSKEELHSEKKLELERRLLDVNNQLNCRKRQTKRPAKVEK
                     PPPPPPPPPPPPPPPELASGSRLTDSSSSSGSGSGSSSSSSGSSSSSSSSGSASSSSD
                     SSSSDSSDSEPEIFPKFTGVKQNDLPPKENIKQIQSSVQDITSAEAPLAQQSTAPCGA
                     PGKHSQQMLGCQVTQHLQATENTASVQTQPLSEYVLLGDCKRVLLGPPVVHTSAESLT
                     VLEPECHAPAQKDIKIKNADSWKSLGKPVKASSVLKSSDELFNQFRKAAIEKEVKART
                     QEQMRKHLEHNAKDPKVSQENQREPGSGLTLESLSSKVQDKSLEEDQSEQQPPSEAQD
                     VSKLWLLKDRNLAREKEQERRRREAMAGTIDMTLQSDIMTMFENNFD"
ORIGIN      
        1 cacgtggcag accctggcca atcagcaggc tgctcgcggg tgagtcccat aaaggcgcca
       61 gtcgctggct gctgacagcc gccatccggg cgagagctgg cggccaccgg tggagaaccg
      121 ggagcgacgg tcctgcactg cttcatctag tgcaaactga aagggtgatc ggataaggcc
      181 ctttcctaag aggtactacc attgctacag aggctcggcc ctggggccgc cccaggcggc
      241 tctttgggaa tttgtagact tttcctgcta agacctcaat ttgtattttt gaagaacaga
      301 aagaaattct gtgacgtgtt gaaataattt aaaccatcta agaccaagac acacataatg
      361 aagcaatgca tactatttat ataaaaaagg acatgtcctc ttagacaact ttaaaatacc
      421 aggatccgaa gtggttgaga atgtctctgc caagtcgaca aacagctatt gttaaccccc
      481 ctccaccaga gtacataaac actaagaaga gtgggcggtt gacgaatcag ctgcagttcc
      541 tacagagggt tgtgctgaag gccctgtgga agcacggctt ctcttggcct ttccaacagc
      601 cggtggacgc cgtgaaacta aagctgcctg actattacac catcataaaa accccaatgg
      661 atttaaatac aattaagaag cggttggaaa ataagtatta tgagaaggct tccgaatgca
      721 tagaagactt caacacaatg ttctcaaact gctacttata caacaagact ggagatgaca
      781 ttgttgttat ggcccaagct ctagagaagt tatttatgca gaaattatct cagatgccac
      841 aagaagagca agttgtgggt ggtaaggaga gaataaagaa agatatccaa caaaagatag
      901 cggtttcctc tgctaaggaa caaatcccct ccaaagcggc agagaatgtc tttaagcggc
      961 aagagattcc ttctgggctt cctgacatct ctctctcgcc cttaaacatg gcacaagaag
     1021 ctcccccgat ctgtgactcg cagtctctgg tccaaattac aaagggtgtg aagaggcgag
     1081 cagacacaac aactcctacc acttccatag ctaaagcaag tagcgaatct cctccgacac
     1141 ttagagaaac aaagccagtg aacatgccag taaaagaaaa tacagtaaag aacgttttgc
     1201 cagactctca gcaacaacac aaagttttaa aaacagtcaa agtaacggag caattaaagc
     1261 actgcagcga gattcttaaa gaaatgcttg ccaagaaaca tttgccgtat gcatggccct
     1321 tctataatcc tgtggatgct gatgctttgg gactccacaa ctactatgac gttgtcaaaa
     1381 atcccatgga tctcggaacg atcaagggga aaatggacaa tcaagaatat aaggatgcat
     1441 atgaatttgc tgcagatgtc agactgatgt tcatgaactg ttacaagtat aatcctcccg
     1501 atcatgaagt tgtggcgatg gctcggaccc ttcaggatgt ttttgaacta cattttgcca
     1561 agattcccga tgaacctatt gagagtatgc atgcatgcca ccttacaaca aacagtgcac
     1621 aagccctcag cagagaaagc agcagcgagg cctcctcggg ggacgcctct tctgaagact
     1681 ctgaggatga acgagtgcag catcttgcca agcttcagga gcagcttaat gctgttcatc
     1741 agcagctgca agttctgtcc caagttccat tacgtaagct gaagaaaaag aatgagaagt
     1801 ccaaaagggc gccaaaaagg aaaaaggtta ataacagaga tgaaaaccca aggaaaaagc
     1861 ctaagcaaat gaagcaaaag gagaaggcca aaatcaatca accaaagaag aagaagccgc
     1921 ttttgaaatc ggaagaggaa gacaatgcga agcctatgaa ctacgatgag aaaaggcagc
     1981 tgagcttgga cataaacaaa ctgcctggag acaagcttgg tcgaatagtt cacataatac
     2041 agtcaaggga gccttccctg agaaactcca acccggacga gatcgagatc gactttgaga
     2101 ccctgaaggc atccacactt agagaactgg agaagtatgt cctggcctgt ctgaggaaga
     2161 ggtcgctgaa gccccaagca aagaaggttg tcaggtctaa ggaggagctc cattctgaaa
     2221 aaaagctgga gctggagagg cggttgctgg acgtcaacaa tcagctgaat tgtaggaaac
     2281 ggcaaacgaa acgtccagca aaagtggaga agccgccccc gcccccgccc ccgcccccgc
     2341 ccccgccgcc tcccccggag ctggccagtg ggtctcgcct gaccgacagc agcagcagca
     2401 gcggcagcgg cagcggcagc agcagcagca gcagcggcag cagcagcagc agcagctcct
     2461 cggggtccgc gagcagcagc agcgactcga gctcctccga cagcagcgat tctgaaccag
     2521 aaatatttcc taaatttact ggagtaaaac agaatgattt acctccaaaa gaaaatataa
     2581 agcagataca atcttctgtg caagacataa cctctgctga agctcccctt gctcagcaga
     2641 gcacagcacc atgcggagcc ccagggaagc actcccagca gatgcttggt tgccaagtga
     2701 cacagcatct gcaggccaca gagaacactg catctgtgca gactcagcct ctttcagagt
     2761 atgtgcttct aggtgattgc aagcgagtat tgcttggccc ccctgtggtg cacacctctg
     2821 ctgagagcct cacagtgctg gagccagaat gccatgctcc cgcgcagaag gatataaaga
     2881 ttaagaatgc agactcttgg aaaagtttag ggaagccagt gaaagcatca agtgtactga
     2941 agtcttcaga tgagcttttc aaccagttta gaaaagctgc aatagaaaag gaggtaaagg
     3001 cccggacaca ggagcagatg cggaaacacc tggagcataa tgcgaaggac ccaaaagtat
     3061 ctcaagaaaa tcagagggag cctggaagtg gattgactct agaatcttta tcaagtaaag
     3121 tgcaagataa gtctcttgaa gaagatcaga gtgaacagca gccaccgtcg gaagctcaag
     3181 acgtaagcaa gctctggctt ctcaaagacc ggaatctagc gagggagaaa gagcaagagc
     3241 gcaggagaag agaagcaatg gcgggtacca ttgatatgac tcttcaaagt gacattatga
     3301 caatgtttga aaataacttt gattaaaact cagtttgtaa attaaccctc aactttaaat
     3361 gaaaggtaaa agtgtttaca gtgggcgtgg ttaaagtggt tactttaaac accagaatgt
     3421 caatcactga ttgtgttctg actgccctaa ataatttttc atttacattt taataaatat
     3481 gttcttttaa tgacataatt gataaaatgt tttataattt tgacctctga aagtggatag
     3541 attttattca tcctaaagag gactgtcagt gatgtaatat agtcctgatc taagtctaaa
     3601 agggatcatc agattgaaaa caaatgaaga atacataaaa gtatataaaa cacgttttgt
     3661 tgagatttta acttttgttt tttgtctaaa cctgtttgtt ggttagttgg tttgtgtcct
     3721 tgtttgagac agggtctcat atactcaggc tggctttggt gaactcaaca tgtagccaag
     3781 gctggccttg atctcctgat tctcctgccc tcagctctca agtactggac tccagaagtg
     3841 tgtcttcatg cctggctgag ttgttaactt ttcaaagaga tatgtgtctg ctgtcagaat
     3901 tgtaacagaa cttctaacaa gaatacttgg tttccatgtg agtcacagtg tgtcagattc
     3961 tctgctagtt ccatgtttaa attccatact gccttttgtt ttaaagtaat attagctatg
     4021 atttgaaagg tgttaaattt taagcaaagt aatagtaaat attgtgtata caagcttctg
     4081 tgggaatgtg tcagacattt cttaaaatgt gtaggtgata gcaatgaata tttgcctaac
     4141 caggggaaat tatagcctat gaaacattga tgttttgtca tttttcaaac tgcatgcatg
     4201 tctaaccata tgtaatcttt tttaaaattt taaacctttg aacatttgaa atataacctg
     4261 attaaggcaa tgctgtgatc taaagtacaa actcagtgtg tgtccagaca gggaagtgca
     4321 cacctgctgt ccagacaggg cagtgcacac ctgctatgca gacagggcag tgcacatctg
     4381 ctgtccagac agggcagtgc acacctgcta tgcagacagg gcagtgcaca cctgctgtcc
     4441 agacagggca gtgcacacct gctatgtaga cagggcagtg cacacctgct gtccagacag
     4501 ggcagtgcac acctgctgtc cagacagggc agtgcacacc tgctgtccag acagggcagt
     4561 gaacacctgc tgtccagaca gggcagtgca cacctgctgt aattccagta tttggggggc
     4621 agaggcagag aaggagtcac tgctgataac tcaagaccag cctggttcac atagcaatct
     4681 tcagattctg gtcatagcca gacctccttg attgagaaga accaagaaag agagagagaa
     4741 agagagtaag aagatggtat tgctttcagg aaacattgct ttcaggaaac aaccagaatt
     4801 aaagtgatag atattttgtt gtacctattt tctacttttt aattaaaaac tttatatgat
     4861 a
//
