LOCUS       XM_006524693            6072 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus bromodomain containing 4 (Brd4), transcript
            variant X24, mRNA.
ACCESSION   XM_006524693
VERSION     XM_006524693.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006524693.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6072
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..6072
                     /gene="Brd4"
                     /gene_synonym="Brd5; HUNK1; MCAP; WI-11513"
                     /note="bromodomain containing 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 29 ESTs, 1332 long SRA reads, 1 Protein, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 26 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:57261"
                     /db_xref="MGI:MGI:1888520"
     CDS             836..4594
                     /gene="Brd4"
                     /gene_synonym="Brd5; HUNK1; MCAP; WI-11513"
                     /codon_start=1
                     /product="bromodomain-containing protein 4 isoform X6"
                     /protein_id="XP_006524756.1"
                     /db_xref="GeneID:57261"
                     /db_xref="MGI:MGI:1888520"
                     /translation="MAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGAAKPG
                     VSTVPNTTQASTSPQTQTPQQNPPPPVQATTHPFPAVTPDLIAQPPVMTMVPPQPLQT
                     PSPVPPQPPPPPAPVPQPVQSHPPIIATTPQPVKTKKGVKRKADTTTPTTIDPIHEPP
                     SLAPEPKTAKLGPRRESSRPVKPPKKDVPDSQQHPGPEKSSKISEQLKCCSGILKEMF
                     AKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVR
                     LMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVTVSSPAVPPPTKVVA
                     PPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKK
                     EKDKKEKKKEKHKKKEEVEENKKSKTKELPPKKTKKNNSSNSNVSKKEPVPTKTKPPP
                     TYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEID
                     FETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSD
                     SEDSETEMAPKSKKKGHTGRDQKKHHHHHHPQMQPAPAPVPQQPPPPPQQPPPPPPPQ
                     QQQQQPPPPPPPPSMPQQTAPAMKSSPPPFITAQVPVLEPQLPGSVFDPIGHFTQPIL
                     HLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPTR
                     PPAVSPALAQPPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPL
                     LPSVKVQSQPPPPLPPPPHPSVQQQQLQPQPPPPPPPQPQPPPQQQHQPPPRPVHLPS
                     MPFSAHIQQPPPPPGQQPTHPPPGQQPPPPQPAKPQQVIQHHPSPRHHKSDPYSAGHL
                     REAPSPLMIHSPQMPQFQSLTHQSPPQQNVQPKKQVKGRAEPQPPGPVMGQGQGCPPA
                     SPAAVPMLSQELRPPSVVQPQPLVVVKEEKIHSPIIRSEPFSTSLRPEPPKHPENIKA
                     PVHLPQRPEMKPVDIGRPVIRPPEQSAPPPGAPDKDKQKQEPKTPVAPKKDLKIKNMG
                     SWASLVQKHPTTPSSTAKSSSDSFEHFRRAAREKEEREKALKAQAEHAEKEKERLRQE
                     RMRSREDEDALEQARRAHEEARRRQEQQQQQQQQRQEQQQQQQQAAAVAAASAPQAQS
                     SQPQSMLDQQRELARKREQERRRREAMAATIDMNFQSDLLSIFEENLF"
ORIGIN      
        1 gggcgcggcg gacgggcccc ggcttggcgt cccggacagc gtgcggcggc gtgcggccta
       61 gcgtctcagc caacaagata gctgtgttcc agttttgttc aaaactacta gtgaagaagt
      121 cctcctctcc tctcattccc atatctgctt tccgtctgga cacaacattg ggtctaagaa
      181 aatcagctca ccaggctgtg accactgaat cacattggag ttctctgtaa gtgcctggtg
      241 aagaatgtga tgggatcact agcatgtcta cggagagcgg ccctgggaca agattgagaa
      301 atctgccagt aatgggggat ggactagaaa cctcccaaat gtctacaacg caggcccagg
      361 cccaacccca gccagcaaat gcagccagca ccaatcctcc acccccagag acctccaacc
      421 ctaacaagcc caagagacag acaaaccaac tgcaatatct gctcagagtg gtgctcaaga
      481 cactatggaa acaccagttt gcgtggcctt tccagcagcc cgtggatgcc gtcaagctga
      541 acctccctga ttactataag attattaaaa cacccatgga tatgggaaca ataaagaagc
      601 gcttggaaaa caactattac tggaatgctc aggaatgtat ccaggacttc aacactatgt
      661 ttacaaattg ttacatctat aacaagttca gaccacagat gtgattaaaa ccaacccttt
      721 caaatagaac gactctggag ggagacacta tacagaactc agcttttgac ctctgctcgt
      781 gtagtgggta aaattgccca gaagagatgg gtagcctgga gatgacatcg tcttaatggc
      841 agaagctctg gagaagctct tcttgcaaaa aatcaatgaa ctgcctacag aagaaactga
      901 gatcatgata gtccaggcaa aaggaagagg acgagggagg aaagaaacag gggcagcaaa
      961 gcctggtgta tccacggtac caaacacaac tcaagcatca acttctccgc agacccagac
     1021 gcctcagcag aaccctcctc cacctgtgca ggccacaact cacccctttc ctgctgtcac
     1081 cccagacctc attgcccagc ctcctgtcat gacaatggtg ccccctcagc cacttcagac
     1141 tccttcaccg gtaccccccc agccaccacc cccacctgct ccagttccac agcctgtgca
     1201 gagtcacccg cccatcattg cgaccacccc ccagcctgtg aagacaaaga aaggggtgaa
     1261 gaggaaagca gataccacca cccctaccac catcgacccc attcatgagc caccctcact
     1321 ggccccagag cccaagaccg ccaagctggg tcctcggcgg gagagcagca gacctgtgaa
     1381 gcctccaaag aaggatgtac cggactcaca gcagcaccca gggccagaga agagcagcaa
     1441 gatctctgag cagctaaagt gctgcagtgg catcctcaag gagatgtttg ccaagaaaca
     1501 tgctgcctat gcctggcctt tctacaagcc tgtggatgtg gaggcactgg gtctgcacga
     1561 ctactgtgac atcatcaaac atcccatgga catgagcaca atcaagtcta aactagagtc
     1621 ccgagagtac agagatgccc aggaatttgg tgctgatgtc cgattgatgt tctccaactg
     1681 ctacaagtac aacccccctg accatgaagt ggtagccatg gctcgaaaac tccaggatgt
     1741 gtttgaaatg cgctttgcca agatgcctga tgagcctgaa gagccagttg ttacagtgtc
     1801 ctctcctgca gtgccacccc ctacaaaggt ggtagcccca ccctcatcta gtgacagcag
     1861 cagcgacagt tcttccgaca gcgacagttc cactgacgac tctgaggaag agcgagccca
     1921 gcggctggct gaactccagg aacagctcaa ggccgtgcat gagcagcttg cagccctctc
     1981 acagccccag cagaacaaac caaagaaaaa ggagaaggac aagaaggaaa agaaaaagga
     2041 aaagcacaaa aagaaagaag aagtggagga aaataaaaaa agcaaaacca aggaacttcc
     2101 tcccaaaaag acaaagaaaa ataacagcag caacagcaat gtgagcaaga aggaaccagt
     2161 acccacgaag accaagccgc ctcccacata tgaatcagaa gaggaggata agtgtaagcc
     2221 catgtcttat gaggagaagc ggcagctaag tctagatatc aacaaacttc ctggtgagaa
     2281 gctaggccgt gtagtacaca taattcagtc aagggaacca tcacttaaaa actccaaccc
     2341 cgatgagatt gagattgact ttgagaccct gaagccatct acactacgag agttggagcg
     2401 atatgtcacc tcctgtttgc ggaagaaaag gaaacctcaa gctgaaaaag ttgacgtgat
     2461 tgctggttct tccaagatga agggattctc atcctctgag tcggagagca ccagcgaatc
     2521 cagctcctct gacagtgaag actctgaaac agagatggct cccaagtcaa aaaagaaggg
     2581 gcacactggg agggaccaga aaaagcatca tcaccatcac catccacaga tgcagccagc
     2641 cccagctcct gtgccccagc agccgccccc acctccacag cagcctcctc cacccccacc
     2701 tccgcagcag cagcagcagc aacctccacc cccaccacct ccgccctcca tgccacagca
     2761 gactgcccca gcgatgaagt cctcgccccc acccttcatc actgcccagg tccccgtcct
     2821 ggaaccacag ctgccaggca gtgtctttga ccctattggc cacttcaccc agcccatctt
     2881 gcacctgccg cagccggagc tgcctcctca cctgccccag ccacctgagc acagcactcc
     2941 accccatctc aaccagcatg ctgtggtctc tcctccagct ttgcacaatg cgctgcccca
     3001 acagccatct cggcccagta accgagctgc tgctctgccc ccaaagccta cccgaccccc
     3061 agctgtgtcc cctgccctgg cccagccccc cctgctccca caaccaccaa tggctcagcc
     3121 cccccaagtg ctgctggagg atgaagagcc acctgcccca cccctcacct ccatgcagat
     3181 gcagttgtac ctacagcagc tgcagaaggt gcagcctccc acaccactac tcccttccgt
     3241 gaaggtgcag tcccaacccc caccgccttt gccgcctcca ccccaccctt ctgtgcagca
     3301 gcagcagctc cagccacagc caccgccacc cccacctcct cagccacagc caccacccca
     3361 gcaacaacac cagcctccac cacgaccagt tcacttgcca tccatgccct tttctgctca
     3421 tattcagcag cccccaccac ccccaggaca gcaacctact cacccacccc caggacagca
     3481 gcccccacca ccacagcctg ccaagcccca gcaagtcatc cagcatcacc cttccccccg
     3541 gcaccacaag tcagacccct actcagctgg tcatcttcgt gaggctccct ctccgcttat
     3601 gatacattcc cctcagatgc cacagttcca gagcctgacc catcagtctc ctccccagca
     3661 aaacgtccag cctaagaagc aggtaaaggg cagggctgag ccacagccac cagggccagt
     3721 catgggccaa ggccagggat gcccacctgc ctcaccggct gccgtgccta tgctgtccca
     3781 ggagctgcga ccaccttcag tcgtccagcc ccagcccctg gtggtagtaa aggaggagaa
     3841 gattcactca ccaatcattc gcagcgagcc tttcagcacc tcacttcgac cagagccccc
     3901 caagcaccca gagaacatca aggccccagt ccacctgccc cagcggcctg agatgaagcc
     3961 tgtagacata gggaggcctg tgatccggcc tccagagcag agtgcacccc caccaggggc
     4021 ccctgacaag gacaaacaga agcaggagcc aaaaacacca gtggcaccca aaaaggacct
     4081 gaaaattaag aacatgggct cctgggccag cctggtacag aagcatccga ccaccccatc
     4141 ctccacagcc aagtcctcaa gtgacagctt tgagcatttc cgccgtgctg ctcgggagaa
     4201 ggaggagagg gaaaaggccc tgaaggctca ggctgagcat gcagagaagg agaaggagcg
     4261 gctgaggcag gagcgcatga ggagccgaga ggatgaagat gcgctggaac aggcacgtcg
     4321 agcccatgag gaggcacgac ggcgccagga gcagcagcag cagcagcagc agcagagaca
     4381 ggagcagcag cagcagcagc agcaggcagc tgctgtggcc gctgcctctg ccccccaggc
     4441 ccagagctcc cagccccagt ctatgctgga ccagcagagg gagttggccc ggaaacgaga
     4501 gcaggagcgg aggcgcaggg aggcaatggc agctacaatt gacatgaatt tccagagtga
     4561 tcttttgtca atatttgaag aaaatctttt ttgagagcac ccaggtgact tctgactttt
     4621 tctggcaaaa atgttgactc tccatccata gtgttagggg cagccgtgga agcagcagca
     4681 gccagggatg tctctgggcc tggctctcct gcatgctgtg cccggggcag gcctgacggg
     4741 cgggcagctg aggatcgcag agcccatctg ccttacagcc agccggacag acgtcctact
     4801 acatgccacc ccctcagagg acgtcagttc agggcacgtc tcaatatgag tcaagtgcca
     4861 gctggacctg aggcctgctt ccccgcgtgc ggggcagagg cccttctctg cgccaaatgt
     4921 ctgactacac agtatacaca ggacattgtt gctgccgcca ccgagactgg ttttctgtcc
     4981 ctgagaacat gacgtttgtg acgtcctacc cattgggagt ccttcacacc ccagccatcg
     5041 ctgcccactc ccaggaggcc agggcaagcc tgtgtggact ggagcagcaa ggcactggcc
     5101 caccccttgc tggcactgac tttgccttga acagaccctc tcccctcccc cacaagcctt
     5161 taattgagag ccgctcttta taagtgttcg cttgtgcaaa agggaatagt gccgtggaag
     5221 tgtgtgtcca tggcagtttg gacaggggtg actgttcaca cgtatggaca ggcctcgcct
     5281 ggggagtaag gccaccaacc aaagtcagtt ccttcccacc tgtgtttctg attttgtttt
     5341 gttttatttt tttcctatat atatattttt ttttgttgtt gttgaattct attttatttt
     5401 taactctctt ctcctcagac acagtggcac tgcttatctc caaatggtgt gatcgtctcc
     5461 tcagtgagcg gcggctccca ctgcgctgtg ggtagtgtgt gactgtggct gtactgtata
     5521 gtgaacatag ttggcatatc tttgtttgaa gtttgttggt gattccacca aactggtgta
     5581 aaaaacaaaa acaaaaaaac ccacaaacca cccaaaactc acaaaaaaaa tcctgcttgt
     5641 attcagtttc aaactttatt agtctcactt ttaattataa aaccagaaag ctgcaatttc
     5701 ttttccctct accccttatt tgttggcttc tttgtttttt taatgtcaaa tctgtttgtt
     5761 tttaccaaga aagggagagc ctgaggaggt ctgcaggctt tggtgggctg cgaaccgagg
     5821 cggaggcccc cacccagtac ctggtgagac cagtgtgctg cgccttcctt cctattagta
     5881 tttttgtttc gttttgtttt taaattggag cccctggtga ggttacatgt gccatgagaa
     5941 cccactctac accatagtgc tggtgcctca gtgttggcca aactctggag tcactgactg
     6001 gtttgacttt catgtggtaa atatgcattt ggtctgtact gatcatggaa taaacacatc
     6061 tctctttttt aa
//
