LOCUS       XM_030254440            3786 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus BRCA1-associated ATM activator 1 (Brat1),
            transcript variant X6, mRNA.
ACCESSION   XM_030254440
VERSION     XM_030254440.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Oct 1, 2023 this sequence was replaced by
            NM_001424646.1.
            
            On Sep 21, 2020 this sequence version replaced XM_030254440.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3786
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..3786
                     /gene="Brat1"
                     /gene_synonym="Baat1"
                     /note="BRCA1-associated ATM activator 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 16 ESTs, 391 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 50 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:231841"
                     /db_xref="MGI:MGI:1891679"
     CDS             539..3004
                     /gene="Brat1"
                     /gene_synonym="Baat1"
                     /codon_start=1
                     /product="BRCA1-associated ATM activator 1 isoform X6"
                     /protein_id="XP_030110300.1"
                     /db_xref="GeneID:231841"
                     /db_xref="MGI:MGI:1891679"
                     /translation="MDPECSRLLPALCAVLADPRQLVADDTCLEKLLDWFKTVTEAES
                     SLQLLQDHPCLMELLSHVLKPQDVSPRVLSFALRLVGVFAAQEDCFEYLQGELLLGLF
                     GESGAPGWAAWSIPSVRSGWIQGLCYLAHHPSALHFLADSGAVDTLFSLQGDPSLFVA
                     SAASQLLVHILALSMQGGAPGSPVPEAAAWPMCAQKIVNHVDESLHAKATPQVTQALN
                     VLTTTFGRCHNPWTGVLWERLSPPVARLFERDPIPAVHALMDLLLSVARSPVLNFAAC
                     GLWEMLAQTLSRLSPIQAGPLALGTLKLQHCPQELRTQAFGVLLQPLACILKATTQAP
                     GPPGLLDGTVGSLLTVDILLASKSACVGLLCQTLAHLEELQMLPQCPSPWPQVHLLQA
                     ALTILHLCDGSADPSSSAGGRLCGTLGGCVRVQRAALDFLGTLSQGTSPLELVLEVFA
                     VLLKTLESPESSPMVLKKAFQATLRWLQNPHKTPSSSDLSSDALLFLGELFPILQKRL
                     CSPCWEVRDSALEFLTHLIRHWGGQADFREALRSSEVPTLALQLLQDPESYVRASAVG
                     AAGQLSSQGLQAAPASPENSQAQQGLLMDLMHILSTDSEGFPRRAVLRVFTDWLRDGH
                     ADVVRDTEWFVATVLQAVSRDLDWEVRVQGLELARVFLTQALGQPSLHCPYTVGLPRA
                     SSPRPHPEFLQTLCRLPLFEFAFCALLDCDRPVAQKACDLLLFLRDKTVPCSSPREAG
                     DSPNSASVEAALQRWREGEQAQPLGDLDPEAMLAILRALDLEGLQGRLAKSSDHVEKS
                     PQSLLQDMLATVGVLEENEADCY"
ORIGIN      
        1 gtgataattc cgagagattg atacagtgtg aaaatgccaa actgcacaca gctggagcgc
       61 gtttacaggg tttgaacctt aggggtgatc ggaacggcag ggtcatcact ggtctccaag
      121 cgcgtcaacc ccgctcttta cacccctccc catgtccgtc acgtggtaca gacttagggc
      181 ggggcctgtg gagacggaaa cccgagcaac actgaggggc ggagcctata gcaacgtgga
      241 gaggaacttc cgtcaggggc ggtgtctgag gggtggggcc tcgttgaagg cggagtgaga
      301 cttgaagctg gcgaggtgga gccaattccc gcggcggggc ggggcctgtg ctgttgggcc
      361 aggctcgcgt tgcgtgaagc gaactctgag atggggcagg acctggggag ggcggggcct
      421 cggccagcgt aaagcggaat ttgcggaggg gaaggcgggg cctgccttag acaccggaac
      481 ctcagcgggc gaggcgcacg caggccgggg tggagatcct ggaactgcct gcctgatcat
      541 ggacccagaa tgctccaggc tcctcccggc tctctgtgct gttttggcag atcccagaca
      601 gctggtggca gatgacacct gcttggagaa actgctggac tggtttaaaa cagtgacaga
      661 ggcagagtct agcctccaac tactacagga ccatccctgc ttaatggagc tcctgtccca
      721 tgtgctgaag ccacaggacg tgagccctag ggtcctctcc tttgctctgc gccttgttgg
      781 ggtcttcgca gcccaggaag actgttttga gtaccttcag ggagagttgt tgctggggct
      841 ctttggggag tcaggtgccc ccggctgggc agcctggagc atcccaagtg tgcgcagcgg
      901 ctggatccag ggtctgtgct acctggcaca ccaccctagc gccctgcact tcctggctga
      961 cagtggtgct gtggacacgc tcttctcctt gcagggagac cccagcctgt tcgtcgcctc
     1021 agcagccagc cagctcctag tacatatcct ggctctgtcc atgcaaggtg gagccccagg
     1081 gtcccccgtc cctgaagctg ctgcttggcc tatgtgtgcc cagaagattg tgaaccatgt
     1141 ggatgagtcc ctgcatgcca aagccacccc ccaggtcaca caggccttga atgtcctgac
     1201 tacgaccttc gggcgctgcc ataacccctg gacaggggtc ctctgggagc ggctaagtcc
     1261 ccctgttgcc cgcctgtttg agagagaccc cattccagcc gtgcacgcgc tcatggacct
     1321 tcttcttagt gtggccaggt cgcctgtgtt gaattttgca gcctgtggcc tgtgggagat
     1381 gctggcccag actctgagcc gcctgagccc catacaagct gggcctctag ccctggggac
     1441 cctgaaactt cagcactgtc cccaggaatt gaggacccag gcctttggag tcctcctaca
     1501 gccactggcc tgtatcctga aagctaccac tcaggcccct ggacctccag gcttgctgga
     1561 tgggactgtg ggtagcttgc tgactgtgga tatactcttg gcttcaaagt cagcctgtgt
     1621 gggactcctt tgccagactc tggctcacct ggaggagctg cagatgctgc cccagtgccc
     1681 ctcaccctgg ccacaggtgc atctgctgca agctgctttg actatattgc atctctgtga
     1741 tggctcagcg gaccccagct ccagtgcagg aggccgtctc tgtgggactc tgggtggctg
     1801 tgttcgtgtc cagcgagcag cccttgactt cttggggacc ctgtctcagg ggacaagccc
     1861 cctggagttg gttctggagg tatttgctgt tctcctgaag accctggaga gcccagagtc
     1921 cagccccatg gtcctaaaga aggccttcca ggccacactc agatggctcc agaacccaca
     1981 caagaccccc agcagctctg atctcagctc cgacgccctg ctgtttctcg gagagctgtt
     2041 ccccatacta cagaagcgcc tatgcagccc atgttgggag gtgagggact ctgccctgga
     2101 gttcctgacg catctgatcc gacactgggg agggcaggct gacttcagag aggcactgcg
     2161 ttcctcagaa gtacccacac ttgccctcca gcttctccaa gacccagaga gttacgtccg
     2221 agcaagtgcc gtgggtgccg ctgggcagct ctccagccag ggtctgcagg ccgctcccgc
     2281 tagccccgag aactcgcagg cccaacaggg cctactcatg gaccttatgc atatcctgtc
     2341 cactgactca gagggcttcc ctcgaagggc tgtgttacgg gtcttcacgg actggctgag
     2401 ggatggccat gctgacgtgg ttcgagacac ggagtggttc gtggccactg ttctccaggc
     2461 agtgagccgg gatctggact gggaggtccg agtgcagggt ttggagctgg cacgggtgtt
     2521 cctcacccag gcactgggcc agcccagcct ccactgtccc tatacagtgg gcctgcccag
     2581 ggcctcctct ccccgcccac acccggaatt cttgcagact ctctgccgtc tgccgctctt
     2641 tgagtttgcc ttttgtgcct tgcttgactg tgaccgaccg gtggcccaaa aggcctgtga
     2701 cctgctcctc ttcttgaggg acaagacagt tccctgcagt agccctcggg aggcagggga
     2761 cagccccaac tcagcctcag tggaggctgc cctgcagagg tggcgggaag gagagcaggc
     2821 ccagccccta ggggacctgg atcctgaggc catgctagcc atcctcaggg ccttagacct
     2881 ggagggcctg cagggcaggc tggccaagag cagcgaccat gtggagaaga gcccacagtc
     2941 cctgctgcag gacatgctgg ccacggtggg tgtgttggag gagaacgaag ctgactgcta
     3001 ctaaggcgtg tccacgtcct gtccctgttt ccatcctgtg ccagcaggag gaccccagcc
     3061 caggtcagca gctcaagaga ccctgcaggg ggtggatcac atgttttaag ccgggtacga
     3121 taacacacct atgatcacag cgtttaaaag accaagggag gagaatgtag agttcccggc
     3181 cagcctggac tagatagcaa ccctgtctca agaaaaccca agaaatcaaa tcaaaacaaa
     3241 atctccaccc tttgtgtgct gtgcatgcag accggaggcc agcctccagt gttcttcctc
     3301 aggtgctgtc caccttggtt tttgagaaaa ggtctctcac taggacttgg tactccctga
     3361 tgaggcttgc cagtgagctc cagggatccc gccaccacct cctcagcacc gggatcataa
     3421 tactgtatcc ctgtgcctgg gtctacatac atgggtgctg ggatttgaac tcaggtcctc
     3481 atgcttgcac ggcaagcact ttacccactg aaccatctcc ccaggtccca cagaatccta
     3541 ctttccacgt gttattaaag aggtggcttg ttttctgctc agaacaggta gtactgatgt
     3601 ctataacctt caattgtgta tgtggattaa caaagcccca ctgtgatctg catatggcct
     3661 tcagctctct gctccgtcac ccaacgtttg aaagtcccat aatctttaaa gaattcagat
     3721 acattaaaag ttcaaagtca caactgtggg tcctgtaaaa taaaataaaa aaaaattttt
     3781 tttaaa
//
