LOCUS       NM_199303               1667 bp    mRNA    linear   ROD 29-JUL-2024
DEFINITION  Mus musculus BPI fold containing family B, member 6 (Bpifb6), mRNA.
ACCESSION   NM_199303 XM_130648
VERSION     NM_199303.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Bingle,C.D., Seal,R.L. and Craven,C.J.
  TITLE     Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a
            subfamily of the BPI fold-containing superfamily
  JOURNAL   Biochem Soc Trans 39 (4), 977-983 (2011)
   PUBMED   21787333
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Bingle,C.D., LeClair,E.E., Havard,S., Bingle,L., Gillingham,P. and
            Craven,C.J.
  TITLE     Phylogenetic and evolutionary analysis of the PLUNC gene family
  JOURNAL   Protein Sci 13 (2), 422-430 (2004)
   PUBMED   14739326
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL833803.8.
            
            On Jul 24, 2009 this sequence version replaced NM_199303.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC048083.1, SRR17784649.470953.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-32                AL833803.8         192057-192088
            33-138              AL833803.8         193569-193674
            139-246             AL833803.8         194302-194409
            247-346             AL833803.8         194645-194744
            347-451             AL833803.8         195615-195719
            452-601             AL833803.8         196162-196311
            602-656             AL833803.8         196475-196529
            657-717             AL833803.8         196957-197017
            718-809             AL833803.8         197663-197754
            810-983             AL833803.8         198418-198591
            984-1034            AL833803.8         199756-199806
            1035-1208           AL833803.8         200148-200321
            1209-1276           AL833803.8         200829-200896
            1277-1322           AL833803.8         202381-202426
            1323-1386           AL833803.8         203128-203191
            1387-1463           AL833803.8         203574-203650
            1464-1667           AL833803.8         204259-204462
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 75.99 cM"
     gene            1..1667
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /note="BPI fold containing family B, member 6"
                     /db_xref="GeneID:228796"
                     /db_xref="MGI:MGI:2684965"
     exon            1..32
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            33..138
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            139..246
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     CDS             147..1496
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /codon_start=1
                     /product="BPI fold-containing family B member 6 precursor"
                     /protein_id="NP_955007.2"
                     /db_xref="CCDS:CCDS16920.1"
                     /db_xref="GeneID:228796"
                     /db_xref="MGI:MGI:2684965"
                     /translation="MLCSLSLVLCGLLAGTRADPGGLLRLGMDIMNHEVQSAMEESHI
                     LEKMAAEASNPQPGGKAIKGLSNMKVKDVLEPVITLNFVPGVGISQCVSTGMTITGKS
                     FTGGNMEINVVLNITATDRLLQDEEAGTPVFRSEGCEVILVSVKTNLPNNKAINKFVD
                     STLRKVLPGLMCPAIDAVLEYVNKKWAKLTDPMPVDKMGTVKYALTSPPATTASHIQV
                     DFSPVVQLQEGQLIQLATDGSLPEFPEGSAKDSQLLLSATFLTAELALLQKSLEVKLK
                     DKRVGKLPQNTRTLAGFIPQVAKTYHKPKPLLIKVKINKPPKVTMKAGKSLMHLHGSL
                     EMFAARRHGKHPKSLFRLETHIGLEIHYSVQDNRLQMVTSMDSLLSLARESSSVGDFH
                     EAELTGFITDYLQKAYIPVVNDVLHVGLPLPDLLAINYNLAELDIVEDALVLGLKTE"
     exon            247..346
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            347..451
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            452..601
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            602..656
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            657..717
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            718..809
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            810..983
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            984..1034
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            1035..1208
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            1209..1276
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            1277..1322
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            1323..1386
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            1387..1463
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            1464..1667
                     /gene="Bpifb6"
                     /gene_synonym="Bpil3; Gm119; Lplunc6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcagctgca ggccttcccc aagcttggca aggtaggcac aggccagctg tgtggcccag
       61 cccctccttg attcctttca gtcaaagctc ataccagaac tacatacctg gccccagctg
      121 ggggaacttc aggagttggt ggaggcatgc tgtgtagcct gagcctggtc ctctgcggcc
      181 tgctggctgg cactcgagct gaccctgggg gtcttctgag gttgggcatg gacattatga
      241 accatgaggt ccagagtgcc atggaggaga gccacatcct ggagaagatg gcagctgagg
      301 ctagcaatcc gcagccaggg ggaaaggcca ttaaaggcct cagcaatatg aaggtaaagg
      361 acgtcctgga gcctgttatc acattgaact ttgtacctgg agtgggcatc tcccagtgtg
      421 tgtccacagg catgaccatc actggcaaga gtttcacagg agggaacatg gaaatcaacg
      481 tggtcctcaa catcacagct actgatcggc ttctgcaaga tgaggaggca ggcacccctg
      541 tgttcaggag tgagggctgt gaggtcatcc tggtcagcgt gaaaaccaac ctgcctaaca
      601 acaaagccat caacaagttt gtggacagta ccctgcgcaa agtcctccct ggcctgatgt
      661 gtccagccat tgatgctgtc ctggagtatg tgaacaagaa atgggccaag ttgactgacc
      721 ccatgcccgt ggacaagatg ggcactgtca aatatgccct gacatcccca ccagccacta
      781 cagctagcca catccaggtg gactttagtc ctgtggtgca gctccaggaa ggccagctta
      841 tccagcttgc cactgatggg tcactcccgg agttccccga gggctcagcc aaggactcac
      901 aactgctgct ctcagccacc ttcctcacag ctgagctggc ccttctgcag aagtccttgg
      961 aagtgaaact caaggacaag agggttggta agcttccaca aaacactagg acactggctg
     1021 gcttcatccc gcaggtggcc aagacatacc acaaaccaaa gcctttgctg atcaaggtca
     1081 agataaacaa accccccaag gttaccatga aggctggaaa gagcctgatg cacctccacg
     1141 gtagcttgga gatgttcgca gcgcgtagac atggcaagca cccgaagtca ctcttccgtc
     1201 tggagactca cattggactg gaaatccact actccgtgca ggataaccgg ctgcagatgg
     1261 tcacctctat ggacagttta ttgagcctgg cccgggaatc ttcttcagtt ggcgatttcc
     1321 acgaggcgga gttaactggc ttcatcactg attatctcca gaaggcctac atccctgtgg
     1381 tgaacgatgt actccatgtt gggcttccac tcccagacct tctggctatc aattataacc
     1441 tggctgagct ggacatagta gaggatgccc tggtgctggg cttgaagaca gaatgaccat
     1501 gcaagacgct gccaactgcc ttcatccgcc gttgttctga accagcagag gagtccagat
     1561 gtgagccaga tgggcctgtc cctgccaccg atggttacct cctgtgacca ggagaaagta
     1621 cgaggcctgg taggcctcag caataaacag gaggaagacc cttacac
//
