LOCUS       NM_001080811            1605 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus BPI fold containing family A, member 6 (Bpifa6), mRNA.
ACCESSION   NM_001080811 XM_622305 XM_975257
VERSION     NM_001080811.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Bingle CD, Seal RL and Craven CJ.
  TITLE     Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a
            subfamily of the BPI fold-containing superfamily
  JOURNAL   Biochem Soc Trans 39 (4), 977-983 (2011)
   PUBMED   21787333
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Wheeler TT, Hood KA, Maqbool NJ, McEwan JC, Bingle CD and Zhao S.
  TITLE     Expansion of the Bactericidal/Permeability Increasing-like
            (BPI-like) protein locus in cattle
  JOURNAL   BMC Genomics 8, 75 (2007)
   PUBMED   17362520
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1605)
  AUTHORS   Bingle CD and Craven CJ.
  TITLE     Comparative analysis of the PLUNC (palate, lung and nasal
            epithelium clone) protein families
  JOURNAL   Biochem Soc Trans 31 (Pt 4), 806-809 (2003)
   PUBMED   12887310
  REMARK    Review article
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC082608.1.
            
            On or before Jan 29, 2007 this sequence version replaced
            XM_622305.3, XM_975257.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082608.1, SRR5189685.159452.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849383 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 76.06 cM"
     gene            1..1605
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /note="BPI fold containing family A, member 6"
                     /db_xref="GeneID:545477"
                     /db_xref="MGI:MGI:3647736"
     exon            1..39
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            40..139
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..1158
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /codon_start=1
                     /product="Splunc6 precursor"
                     /protein_id="NP_001074280.1"
                     /db_xref="CCDS:CCDS50760.1"
                     /db_xref="GeneID:545477"
                     /db_xref="MGI:MGI:3647736"
                     /translation="MRLLWIFLSVGCLLSRSHALLEDSIQKSGIQSEGGDTGLDAGLV
                     YDNGGEFIDLGDGSGTIPTSMTVTSPEISTMSLGELNQPEMNIPGGLDTSGITSQLPT
                     SGLNQDMLAQEGLLSTVILNSQNLLTEREKLQTLLLGGRVSFGVNNDLLDAAGTNAVE
                     GLVCKGPLGGLCGHGSLSGMNDALKTMNSGELDSRLNVTRFDIVQLSWKVLASSDFEI
                     KFQTKLTINFPGILSFLSGSTVDVDIEIPLQLQQMEPGQMSFSVKSCRAVFTGIQVNS
                     GVISKMMESMLKWSLNISLPNMLCPVARFWFYIINQQLAILQNIASLGMPEDSNLLDT
                     KQPMLYERTYTMDFKNKTFPASFINWLFKTPSS"
     exon            140..351
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            352..638
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            639..743
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            744..884
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            885..948
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1009
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            1010..1101
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1144
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
     exon            1145..1572
                     /gene="Bpifa6"
                     /gene_synonym="EG545477; Gm5840; Splunc6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagacctaca tgtcctaagt ggctagagct gtaacccagg cgcttgcagt gaacatgaga
       61 ctcttgtgga tctttctctc cgttggctgc ctgcttagca gaagccatgc tttgttggaa
      121 gattccattc aaaagtcagg catccaaagt gaaggtggtg atacaggatt ggatgcagga
      181 ttggtgtatg ataatggagg tgaattcatt gatctgggag atggcagtgg gacaatccca
      241 acttctatga ctgttacttc acctgagatc tctacaatgt ccctgggtga gcttaatcaa
      301 cctgagatga acatcccagg aggcttggac acaagtggca ttaccagcca attgccaaca
      361 tctggcctca accaagacat gctggcccag gaaggactgt tgagtactgt tattctcaac
      421 agccagaatc tactcacaga aagggaaaag ctacaaacgc tactcctggg tggcagagta
      481 tcatttggtg tcaacaatga tctcctggat gcagcaggga ccaatgcggt ggaaggcctg
      541 gtctgcaaag gccccctggg tggcctttgt ggccatggga gtctctctgg catgaatgat
      601 gctctgaaga ccatgaattc tggggaactc gacagccggc tcaatgtcac ccgcttcgac
      661 attgtccagc tgtcatggaa ggtccttgcc tcatctgatt tcgaaattaa atttcagacc
      721 aagttgacta tcaatttccc agggatactc tcatttctca gtggctccac agtggatgtg
      781 gacatcgaga tccccttgca attgcaacag atggaacctg gtcaaatgtc cttttccgtg
      841 aagagctgcc gggcagtatt cactgggatc caagtgaatt caggtgtaat ctccaaaatg
      901 atggaatcaa tgttgaaatg gtccttgaac atctccttgc ccaacatgtt gtgcccagtg
      961 gcccgattct ggttctacat catcaaccaa cagttggcca ttctccaaaa tatcgcctca
     1021 cttgggatgc cggaggacag caacttgctt gataccaaac aacccatgct gtatgaacgc
     1081 acttatacca tggactttaa gaacaaaacc ttcccggctt cttttatcaa ctggctgttt
     1141 aaaactccct cttcataaac aagttgagac accatgctgg cttgaggaag acttctaaag
     1201 ccagacaact gtgcaaggaa gaagaagaag gggcaagtgg agttagcctg gatgtagccc
     1261 tcaaagtctc cagagaccag ccatgaaggc tcaagtggag ggcaagacct gcagcagcca
     1321 agcatctggc aggagaggat cctgggaacc cctctaccat gacacacatt cttcctgcag
     1381 gtcacactta ataggccatt tcttatttgg atctatcatg gtgttctgtg cgagattaat
     1441 gaggtgttat gctgcgaaca gaaagttata taaaaacaag tccccccccc ttgtcactgc
     1501 tgctaagaat gtagcagaaa ttgtctcaag tgtctctcta atcagaaaca ataaaggtct
     1561 ccttggattc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//
