LOCUS       NM_025990               1085 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus BPI fold containing family A, member 5 (Bpifa5), mRNA.
ACCESSION   NM_025990
VERSION     NM_025990.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Bingle,C.D., Seal,R.L. and Craven,C.J.
  TITLE     Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a
            subfamily of the BPI fold-containing superfamily
  JOURNAL   Biochem Soc Trans 39 (4), 977-983 (2011)
   PUBMED   21787333
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   LeClair,E.E., Nomellini,V., Bahena,M., Singleton,V., Bingle,L.,
            Craven,C.J. and Bingle,C.D.
  TITLE     Cloning and expression of a mouse member of the PLUNC protein
            family exclusively expressed in tongue epithelium
  JOURNAL   Genomics 83 (4), 658-666 (2004)
   PUBMED   15028288
  REMARK    GeneRIF: splunc5, splunc1, and lplunc1 are expressed in unique
            domains along a continuous corridor of oral, lingual, pharyngeal,
            and respiratory epithelia [splunc5]
REFERENCE   3  (bases 1 to 1085)
  AUTHORS   Bingle,C.D., LeClair,E.E., Havard,S., Bingle,L., Gillingham,P. and
            Craven,C.J.
  TITLE     Phylogenetic and evolutionary analysis of the PLUNC gene family
  JOURNAL   Protein Sci 13 (2), 422-430 (2004)
   PUBMED   14739326
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK009835.1, AK009803.1 and AK009329.1.
            
            [WARNING] On Oct 18, 2024 this sequence was replaced by
            NM_025990.5.
            
            On Sep 18, 2009 this sequence version replaced NM_025990.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK010012.1, AK009580.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849383, SAMN00849387
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3                 AK009835.1         1-3
            4-1083              AK009803.1         2-1081
            1084-1085           AK009329.1         1080-1081
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 76.19 cM"
     gene            1..1085
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /note="BPI fold containing family A, member 5"
                     /db_xref="GeneID:67135"
                     /db_xref="MGI:MGI:1914385"
     exon            1..51
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /inference="alignment:Splign:2.1.0"
     exon            52..277
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /inference="alignment:Splign:2.1.0"
     CDS             64..876
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /note="palate lung and nasal carcinoma-like protein; short
                     palate lung and nasal clone protein 5; tongue plunc-like
                     protein; BPI fold-containing family A member Pluncl"
                     /codon_start=1
                     /product="BPI fold-containing family A member 5 precursor"
                     /protein_id="NP_080266.2"
                     /db_xref="CCDS:CCDS16926.1"
                     /db_xref="GeneID:67135"
                     /db_xref="MGI:MGI:1914385"
                     /translation="MFLAGSFIVLCGLLAQSTAQLAGLPYPLGQDLPMSMGHCRSLHV
                     GQTLPYYGVTPVVSTYPSDHLDRNFRDAFRHGLLSGGILSFLEHIPLLNYVRPTGSNA
                     GGLVGVLGKVISSIPLLNNILDIRVTNPQLLEIGLVQSYDFHRLYVTIPLGFDLRVNT
                     LVVGSLLELSVKLDVTAEVYAVRDSYGRSRLVIGDCIYPPGSLRISLLNRLGPLQNLI
                     DSLTDILTRVIPGLVQGVVCPLVNGVLSLLDVTLAHDVADALLRGVQFVIKT"
     exon            278..434
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /inference="alignment:Splign:2.1.0"
     exon            435..542
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /inference="alignment:Splign:2.1.0"
     exon            543..692
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /inference="alignment:Splign:2.1.0"
     exon            693..771
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /inference="alignment:Splign:2.1.0"
     exon            772..835
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /inference="alignment:Splign:2.1.0"
     exon            836..910
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /inference="alignment:Splign:2.1.0"
     exon            911..1085
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1064..1069
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /note="hexamer: AATAAA"
     polyA_site      1081
                     /gene="Bpifa5"
                     /gene_synonym="2310021H06Rik; 2310074B19Rik; Pluncl;
                     Splunc5; Tpl"
                     /note="major polyA site"
ORIGIN      
        1 gaaacaggta gaagaggagc ccaggacggc cactgagacc ttgagactca gacaccaata
       61 gagatgtttc tagctgggag cttcattgtc ctctgtgggc tgctggccca gagcacagcc
      121 cagctggcag gactgcccta tcccctgggc caagatctgc ccatgtccat gggtcactgc
      181 cggtccttgc acgtgggcca gaccctgccc tactacggag tgactccagt cgtgtctaca
      241 tatccttcag accatcttga tagaaacttc agagatgctt tcagacacgg cctgctttcc
      301 ggagggattc tgagctttct ggaacacata ccactcttaa actatgtgag acctacagga
      361 agcaatgccg gtggcctggt tggtgtgctt ggaaaagtga tttcatcaat ccctctcttg
      421 aacaacatcc ttgacataag agtcactaat ccccagctac tggaaattgg tcttgtgcag
      481 agctatgatt tccaccgcct ctatgtcacc atcccactgg gctttgatct cagagtgaac
      541 acactggtgg ttggaagtct gttggagcta tctgtgaagc tagatgtcac tgcagaagtc
      601 tatgctgtga gagattctta tgggaggagt cgcctggtca ttggtgactg tatataccct
      661 cctggcagct tgcgtatctc cttgcttaat agacttggtc ccctgcaaaa ccttatagac
      721 agcctcacag acatcttgac tagagtcatt cctggcctgg tgcagggtgt ggtgtgtcct
      781 ctggtcaatg gggttctcag cctcttggac gtcaccctag cacatgatgt tgctgatgcg
      841 ctgctgcgtg gagtacagtt tgtcattaag acctaagcct tccaagaacg aacctatctc
      901 tgctgcaatg aaccatttct tgctgctctg tccactccct cctgcccagc ttacatggct
      961 cacagaaggg ggagccatat cctggaaaat ggtatggcca ccttctcaag aaacctgctc
     1021 tcctcctttc tcaggcttga tgaatattcc atgttcatca ctaaataaaa tggttcttct
     1081 tctac
//
