LOCUS       NM_172506               4428 bp    mRNA    linear   ROD 11-FEB-2025
DEFINITION  Mus musculus BOC cell adhesion associated, oncogene regulated
            (Boc), mRNA.
ACCESSION   NM_172506 XM_001000381
VERSION     NM_172506.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4428)
  AUTHORS   Franks,N.E. and Allen,B.L.
  TITLE     Hedgehog-dependent and hedgehog-independent roles for growth arrest
            specific 1 in mammalian kidney morphogenesis
  JOURNAL   Development 151 (24) (2024)
   PUBMED   39629522
REFERENCE   2  (bases 1 to 4428)
  AUTHORS   Balekoglu,N., Michaud,J.F., Sauve,R., Ayinde,K.S., Lin,S., Liu,Y.,
            Kramer,D.A., Zhang,K., Steffen,A., Stradal,T., Angers,S., Chen,B.,
            Yam,P.T. and Charron,F.
  TITLE     The WAVE regulatory complex interacts with Boc and is required for
            Shh-mediated axon guidance
  JOURNAL   iScience 27 (12), 111333 (2024)
   PUBMED   39640588
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4428)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   4  (bases 1 to 4428)
  AUTHORS   Lee,J., Kim,Y., Ataliotis,P., Kim,H.G., Kim,D.W., Bennett,D.C.,
            Brown,N.A., Layman,L.C. and Kim,S.H.
  TITLE     Coordination of canonical and noncanonical Hedgehog signalling
            pathways mediated by WDR11 during primordial germ cell development
  JOURNAL   Sci Rep 13 (1), 12309 (2023)
   PUBMED   37516749
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 4428)
  AUTHORS   Qiu,T., Huteckova,B., Seppala,M., Cobourne,M.T., Chen,Z.,
            Hovorakova,M., Buchtova,M. and Tucker,A.S.
  TITLE     Molecular profiling of the vestibular lamina highlights a key role
            for Hedgehog signalling
  JOURNAL   Development 150 (7) (2023)
   PUBMED   36971701
REFERENCE   6  (bases 1 to 4428)
  AUTHORS   Kang,J.S., Yi,M.J., Zhang,W., Feinleib,J.L., Cole,F. and
            Krauss,R.S.
  TITLE     Netrins and neogenin promote myotube formation
  JOURNAL   J Cell Biol 167 (3), 493-504 (2004)
   PUBMED   15520228
  REMARK    Erratum:[J Cell Biol. 2023 Oct 2;222(10):e20040503909082023c. doi:
            10.1083/jcb.20040503909082023c.. PMID: 37702713]
REFERENCE   7  (bases 1 to 4428)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Koseki,H., Hiraoka,S.,
            Saga,Y., Kitamura,H., Nakagawa,T., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of FLJ
            genes: the complete nucleotide sequences of 110 mouse
            FLJ-homologous cDnas identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (2), 127-135 (2004)
   PUBMED   15449545
REFERENCE   8  (bases 1 to 4428)
  AUTHORS   Kang,J.S., Feinleib,J.L., Knox,S., Ketteringham,M.A. and
            Krauss,R.S.
  TITLE     Promyogenic members of the Ig and cadherin families associate to
            positively regulate differentiation
  JOURNAL   Proc Natl Acad Sci U S A 100 (7), 3989-3994 (2003)
   PUBMED   12634428
REFERENCE   9  (bases 1 to 4428)
  AUTHORS   Mulieri,P.J., Kang,J.S., Sassoon,D.A. and Krauss,R.S.
  TITLE     Expression of the boc gene during murine embryogenesis
  JOURNAL   Dev Dyn 223 (3), 379-388 (2002)
   PUBMED   11891987
  REMARK    GeneRIF: Expression of the boc gene during murine embryogenesis
REFERENCE   10 (bases 1 to 4428)
  AUTHORS   Kang,J.S., Mulieri,P.J., Hu,Y., Taliana,L. and Krauss,R.S.
  TITLE     BOC, an Ig superfamily member, associates with CDO to positively
            regulate myogenic differentiation
  JOURNAL   EMBO J 21 (1-2), 114-124 (2002)
   PUBMED   11782431
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK028889.1.
            
            On Apr 6, 2007 this sequence version replaced NM_172506.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK028889.1, BC078631.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4428              AK028889.1         2-4429
FEATURES             Location/Qualifiers
     source          1..4428
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 28.81 cM"
     gene            1..4428
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /note="BOC cell adhesion associated, oncogene regulated"
                     /db_xref="GeneID:117606"
                     /db_xref="MGI:MGI:2151153"
     exon            1..433
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            434..610
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     CDS             529..3861
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /note="brother of CDO; biregional Cdon binding protein;
                     biregional cell adhesion molecule-related/down-regulated
                     by oncogenes (Cdon) binding protein"
                     /codon_start=1
                     /product="brother of CDO precursor"
                     /protein_id="NP_766094.1"
                     /db_xref="CCDS:CCDS28186.1"
                     /db_xref="GeneID:117606"
                     /db_xref="MGI:MGI:2151153"
                     /translation="MTTCRRERPILTLLWILMATAGCLADLNEVPQVTVQPMSTVQKL
                     GGTVILGCVVEPPWMNVTWRFNGKELNGSDDALGVFITRGTLVIAALNNHTVGRYQCV
                     ARMPAGAVASVPATVTLANLQDFKLDVQHVIEVDEGNTAVIACHLPESHPKAQVRYSV
                     KQEWLEASRDNYLIMPSGNLQIVNASQEDEGMYKCAAYNPVTQEVKTSGSGDRLRVRR
                     STAEAARIIYPLEAQTVIVTKGQSLILECVASGIPPPRVTWAKDGSSIAAYNKTRFLL
                     SNLLIDTTSEEDSGTYRCMASNGVGDPGAAVILYNVQVFEPPEVTVELSQLVIPWGQS
                     AKLTCEVRGNPPPSVLWLRNAVPLTSSQRLRLSRRALRVVSVGPEDEGVYQCMAENAV
                     GSAHAVVQLRTARPDTTLRPGRDTKPIAATPPMPPSRPSRPDQMLREQPGLVKPPTSS
                     VQPTSLKCPGEEQVAPAEAPIILSSPRTSKTDSYELVWRPRHEGSSRTPILYYVVKHR
                     KVTNSSDDWTISGIPANQHRLTLTRLDPGSLYEVEMAAYNCAGEGQTAMVTFRTGRRP
                     KPEIVASKEQQIQRDDPGASLQSSSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPR
                     GNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNML
                     GESEPSAPSRPYVVSGYSGRVYERPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPI
                     HGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSN
                     VMICETKARKFSGQPGRPPPLTLAPPQPPPLETMERPVGTGAMVARASDLPYLIVGVV
                     LGSIVLIIVTFIPFCLWRAWSKQKHTTDLGFPRSALLSSSCQYTMVPLEGLPGHQANG
                     QPYLGGVSGRACVSRVHGSRGCPAATVGCPGRKPQQHCPGELAQQREDTNSQLRQPIV
                     SNGYDLQNQQVARGPQCASGVGAFLYTLPDDSTHQLLQPQDCCHLQKQPVTTCQTAVR
                     RTSESPGLESSWDPPYHSGPQCCLGLVPVEEVDSSDSCQVGGGDWSSQHPSGTYTGQE
                     RGMRFSPSPSVHVSFETPPPTI"
     exon            611..889
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            890..1036
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            1037..1180
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            1181..1474
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            1475..1747
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            1748..2055
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            2056..2215
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            2216..2326
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            2327..2533
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            2534..2715
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            2716..2821
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            2822..2944
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            2945..3166
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            3167..3402
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            3403..3482
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            3483..3673
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
     exon            3674..4428
                     /gene="Boc"
                     /gene_synonym="4732455C11; mFLJ00376"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaaagaagga attgtttgca agttcagtca tccaaaaaag cgtcttccat atggagggat
       61 tgggtgcgct gggcgcggcg tcctctgcct tgcccgcctg ctgccgccgc tgccaccacg
      121 gctctggctt cctgcagtgg ggaccctgag ctgggtctcg ctggtgtcag ctccggccgg
      181 ccgcattctc acactctcgc acctcgtacc cgccgcggcc acacaagccc ttcctcctcc
      241 ggccgcaact tctgggtcct gggctctttt gttgctccgg ctgcggccac tctgccgtgg
      301 tgtgtgtcct cttgtgtcac cgcgctgtgc gtgtgtgtgt cggtgtgcgc gggggccgtg
      361 tggcccttct ccgcttcacc acgcgggacc cggagtcccg gccccctctt cccaggctcc
      421 ggctgcaggc gaggatttca ggggacggcg gtatccctac ttgtatcaca cgtggcttat
      481 gggactttgg ctcagaaccc tctgtgacac actgtacctc gtgggaagat gacgacgtgc
      541 cgaagagagc ggcctatact tacactgctt tggattctca tggccacagc aggctgcctt
      601 gctgatttga atgaggttcc tcaggtcaca gtccagccca tgtccactgt ccagaagctg
      661 ggaggaactg tgatcctggg ctgtgtggtg gagccaccat ggatgaacgt gacttggcgc
      721 ttcaacggaa aggagctaaa tggctctgat gatgctctgg gtgtcttcat cacccgtggg
      781 acccttgtca ttgctgccct caacaaccac actgtgggac ggtaccagtg tgtggcacgg
      841 atgcctgcag gagctgtggc cagtgtgcca gccacagtga cgctagccaa tctccaggac
      901 tttaaattag atgtgcagca tgtgattgaa gtagacgagg ggaacacagc cgtcattgcc
      961 tgccacctgc ctgagagcca cccaaaagcc caggtccggt acagtgtcaa acaggagtgg
     1021 ctggaggcct ctagagacaa ctacctgatc atgccatccg ggaatctcca aattgtcaat
     1081 gccagccaag aggacgaagg catgtacaag tgtgccgcct acaacccggt gacccaggaa
     1141 gtgaaaacct ccggctccgg cgacaggctg cgcgtgcgcc ggtccactgc tgaggctgcc
     1201 cgcatcatct acccactgga agcccagacc gtcattgtca ccaaaggcca gagtctcata
     1261 ctggagtgtg tggccagtgg aatcccacca cctcgagtca catgggccaa ggatgggtcc
     1321 agcattgctg cctataacaa gactcgcttc ctgctgagta atttgcttat tgacaccacc
     1381 agcgaggagg actcaggcac ctaccgatgt atggccagca atggggttgg ggatcctggg
     1441 gcagcagtca tcctctacaa tgtccaggtg ttcgaacccc ctgaggtcac ggtggagctg
     1501 tcccagctgg tcatcccatg gggccagagt gcaaagctca cctgtgaggt tcgaggaaac
     1561 cccccaccct ctgtactatg gctgaggaat gcagtgcccc tcacctccag ccagcgcctc
     1621 cggctgtcac gtagagccct gcgggtggtc agtgttgggc cagaggacga aggcgtgtac
     1681 cagtgcatgg ctgagaatgc ggttggcagt gcccacgctg tggtccaact gaggaccgcc
     1741 cggccagaca caaccctgag acccgggagg gataccaagc cgattgctgc cacacccccc
     1801 atgccaccct ccagacccag cagacctgac cagatgcttc gggaacaacc ggggcttgtt
     1861 aagcccccaa cgtcgtcggt acagcctact tccctgaagt gcccgggaga agagcaggta
     1921 gcccctgcag aggcacctat catcctcagc tcaccccgga cctccaagac ggactcctat
     1981 gagctggtgt ggcggcctcg ccatgagggg agcagccgga cacccatcct gtactacgta
     2041 gtgaagcatc gtaaggtcac gaactcctct gacgactgga ccatttctgg cattccagcc
     2101 aaccagcacc gcctcaccct gaccaggctt gaccctggaa gcttgtacga agtggagatg
     2161 gcagcctaca actgtgctgg cgagggccag acagctatgg tcaccttccg aacaggacgg
     2221 cggcccaaac ctgagatcgt ggccagtaag gagcagcaga tccagagaga tgaccctggt
     2281 gccagtctcc agagcagcag ccagcctgac catggccgcc tctccccccc agaagctcca
     2341 gacagaccca ccatctccac agcttctgag acctccgtgt acgtaacctg gattccccga
     2401 gggaacggcg gcttcccgat tcagtctttc cgtgtagagt acaagaagct aaaaaaagtg
     2461 ggagattgga tactggctac cagtgccata cctccctcga ggctctctgt ggagatcaca
     2521 ggcctagaga aaggtatttc ttacaagttc cgagttcgtg ctttgaacat gttaggggag
     2581 agtgagccca gtgctccctc ccggccctac gtggtgtcag gctacagtgg ccgtgtatat
     2641 gagaggcccg tggcaggacc ttacatcacc ttcactgatg cagtcaatga gaccactatt
     2701 atgctcaagt ggatgtatat cccagccagt aacaacaaca ccccaatcca tggcttctat
     2761 atctactacc gacccacaga cagtgacaat gacagtgact acaagaagga catggtagaa
     2821 ggggacaggt actggcactc catcagccac ctgcagccag agacttccta tgacattaaa
     2881 atgcagtgct tcaatgaagg aggggagagc gagttcagca atgtcatgat ctgcgagacc
     2941 aaagctcgga aattttctgg tcagcctgga agacccccac ccttgactct agctccacca
     3001 cagcctccgc ccctagaaac catggaacgg ccggtgggca ctggagccat ggtggcacgg
     3061 gccagcgacc tgccctatct gattgtcggg gttgttctgg gctctatagt cctcatcatc
     3121 gtcaccttca tccccttctg cctatggagg gcctggtcta agcagaaaca cacaacagat
     3181 ctgggttttc ctcggagtgc cctcctgtct tcttcgtgcc agtacacaat ggtgccattg
     3241 gagggacttc caggtcacca agccaacggg cagccctacc ttggtggcgt cagtggacgg
     3301 gcctgtgtca gtcgagtgca cggaagcagg ggctgccctg ctgctacagt gggctgtcca
     3361 ggcaggaagc ctcagcagca ctgcccaggg gagcttgccc agcagcggga agacaccaac
     3421 agccaactga ggcagcccat tgttagcaac ggatatgacc tccagaacca gcaggttgcc
     3481 agaggtcccc agtgtgcctc aggagtagga gctttcttat acacgctgcc tgatgactca
     3541 actcaccagc tgctccaacc tcaagactgc tgtcacctcc agaagcaacc cgtcaccaca
     3601 tgccaaacag cagtgaggcg aacgtctgaa agtcctggac tagaatcttc atgggaccct
     3661 ccatatcatt cagggcccca gtgctgttta ggtcttgtac cagttgaaga agtagacagt
     3721 tctgactcct gccaagtggg tggaggagac tggagttccc agcatccatc agggacctac
     3781 acaggacagg aacgtgggat gcggttctcg cctagcccat cagttcatgt gtcctttgaa
     3841 acaccacctc ccacaattta ggccgaagct aatatcccag aaagactata tattgtttgt
     3901 ttgtttgttt gttgacagag aaaaattggt atttattttt ctattatagc catatttata
     3961 tatttatgca cttgtaaata aatgtatatg tgtttctata attctggaga gatatggaat
     4021 cctccccttt ctggcacaag acagaaagca agcagctgag taactggaga ccagtggaaa
     4081 tgagtatcat agatggtcag gctgcagatg gatcccagaa cctgcagcta ccacggacac
     4141 caggaggccc tcgggccact tggtggaagg accctaagca cactgttcat gaagaacaca
     4201 gggataaagc aaaggccatc atgccgcaga ctggagccac ctggaagcca ctccaatttg
     4261 gtggcacagg acaggtttcc aagatgtcac gagaaaagcc ccagatgtgt acagcactct
     4321 aagcattaac agtctcccag aatcaataat cggtggcaac atatctctgt aaaaacaaac
     4381 actgtaactt ctaaataaat gtttagtctt ccttgtaacc ttcatctt
//
