LOCUS       NM_194339               4286 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus BMS1, ribosome biogenesis factor (Bms1), mRNA.
ACCESSION   NM_194339 XM_132833
VERSION     NM_194339.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4286)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4286)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. PMID: 29144450]
REFERENCE   3  (bases 1 to 4286)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Koseki,H., Hiraoka,S.,
            Saga,Y., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: III. the complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (4), 167-180 (2003)
   PUBMED   14621295
REFERENCE   4  (bases 1 to 4286)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC140466.3.
            
            On Apr 1, 2022 this sequence version replaced NM_194339.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC057054.1, AK129082.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164142 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-128               AC140466.3         142488-142615       c
            129-337             AC140466.3         141609-141817       c
            338-528             AC140466.3         140588-140778       c
            529-608             AC140466.3         139663-139742       c
            609-797             AC140466.3         136931-137119       c
            798-940             AC140466.3         136279-136421       c
            941-1062            AC140466.3         135155-135276       c
            1063-1256           AC140466.3         134682-134875       c
            1257-1396           AC140466.3         131211-131350       c
            1397-2157           AC140466.3         127780-128540       c
            2158-2259           AC140466.3         127456-127557       c
            2260-2417           AC140466.3         126289-126446       c
            2418-2499           AC140466.3         121274-121355       c
            2500-2573           AC140466.3         119963-120036       c
            2574-2753           AC140466.3         119327-119506       c
            2754-2942           AC140466.3         116003-116191       c
            2943-3123           AC140466.3         115744-115924       c
            3124-3182           AC140466.3         115518-115576       c
            3183-3305           AC140466.3         114358-114480       c
            3306-3453           AC140466.3         112439-112586       c
            3454-3629           AC140466.3         111956-112131       c
            3630-3791           AC140466.3         107439-107600       c
            3792-4286           AC140466.3         106581-107075       c
FEATURES             Location/Qualifiers
     source          1..4286
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 55.86 cM"
     gene            1..4286
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /note="BMS1, ribosome biogenesis factor"
                     /db_xref="GeneID:213895"
                     /db_xref="MGI:MGI:2446132"
     exon            1..128
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            129..337
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            338..528
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            529..608
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            609..797
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            798..940
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            941..1062
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            1063..1256
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            1257..1396
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            1397..2157
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            2158..2259
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            2260..2417
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            2418..2499
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            2500..2573
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            2574..2753
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            2754..2942
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            2943..3123
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            3124..3182
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            3183..3305
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            3306..3453
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            3454..3629
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            3630..3791
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     exon            3792..4286
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4266..4271
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /note="hexamer: ATTAAA"
     polyA_site      4286
                     /gene="Bms1"
                     /gene_synonym="Bms1l; mKIAA0187"
                     /note="major polyA site"
ORIGIN      
        1 gtcgtgcttg cgggctggag cggttgctgc cgtgagtccg agtgctttcg cgagccccgt
       61 cggcttcccg gttcggtcgg tcctcgacct cccgacaggc tgctcccagg ctgcgtctgg
      121 gctggaaggt aagacttatt tgtagtagat aaatagccac catggagacc aaggaccaca
      181 agaaacatag gaagaagcac agtgggccta aagctgagaa gaaaaagaaa cggcacctgc
      241 aagacctaca gcttggagat gaagaggatg cccggaagag aaaccccaaa gctttcgcag
      301 tgcagtcagc tgtgcggatg gcgaggtcct ttcacaggac tcaggactta aagacgaaaa
      361 agcatcacat tccagtggtt gacagaactc cactggagcc cccaccaata gtggtagtgg
      421 tgatgggacc tccaaaagtt ggaaagagca ctttgatacg atgcctgatt cggaatttta
      481 ccagacagaa attgagtgag atcagaggcc ctgtgacaat tgtgtcaggt aaaaagcgca
      541 gacttacaat tattgagtgt gggtgtgaca tcaatgtaat gattgatcta gctaaagtag
      601 cagatctggt gctaatgctt atagatgcca gctttgggtt tgagatggag acatttgagt
      661 ttctaaacat ctgtcaagta catggctttc ctaaaattat gggagttctc acccatttgg
      721 actccttcaa gcataacaag caacttaaga agacaaagaa gcgtttaaag cacagattct
      781 ggacagaagt ctacccgggc gccaagctat tctacctttc tggaatggtg catggagagt
      841 atcagaacca agagattcac aacctgggcc ggtttattac agttatgaag tttaggcctc
      901 tcacatggca gacttctcat ccttacatct tggcagacag gatggaagac ttgacaaatc
      961 ctgaggctat ccgcacaaac gtcaagtgtg accgaaaggt gtctctttat ggttatttac
     1021 gaggggccta cctgaaaaat aacagccaga tccacatgcc aggcgtgggg gattttgtcg
     1081 ccagtgatgt cagttttctc ccagacccct gcgctcttcc ggaacagcag aagaagcgct
     1141 gtttgaatga gaaggagaaa ctggtttacg cgcctctctc tggggttggg ggtgtgctgt
     1201 acgacaaaga tgctgtctat gtcgacctag gtggcagcca tggcttccag gcagcggaag
     1261 aaacaggccc tacgcatgaa ctggtccaga gcctcatctc cacccatgcc agtatcgatg
     1321 ctaagatggc ttcaagtaga gtgacacttt tctctgattc caaacctctg gggtcagaag
     1381 acatagataa tcaagggctg tggatgccga aagaggaaaa gcaggtggat gtggaaacgg
     1441 gccgagtgcg tcggaaagcc atttttggag atacagaaga tgagtctgga gatgaagaga
     1501 gtgaagatga agaagacatg tctgaagctg acgggatgga acctggctct agtgatgatg
     1561 aggcggaaga ggcagaggaa gaaggtgctg agagcagcag cggtaactac atgatgggta
     1621 ggggacgcaa acgaccaaag cttgaggagc aggaggaaga cagtgaggca gactcgccag
     1681 cgtttgctga tagcgatgat gaccttgaga ggagctctgg gggcgaggag gaggccgagg
     1741 aggcggatga aagcagtgct gacggtgcct ccacagggga gagggacgct ggggaatgcg
     1801 gctctgttgg agaagctagt gaggagagcc cgtcagcagc ccaccagtgg aggccccatg
     1861 cggatgcaca gaagccctcc ccggtgagaa aagcagccct caccacttct gactctggcc
     1921 actgtacagc cgaggaggcg tttccatctg aggatgagtc tgaggactct gagctcagtg
     1981 cagaggaaga agactccgac cacagagagg ttagggggaa gcttgcacac cctctgcgcg
     2041 acagcggaca gaaacctgcc tcggagagcc tggttgatga gaccagcgac attgaaagtt
     2101 tactcaaaga ggaggaagag tacaaggagg acaatagcag ctctgtagaa acgtcaggtg
     2161 ctctgaagtg gaaggaagac ctttccagaa aagcagcaga ggcctttctc aggcagcagc
     2221 aagcagctcc gaatcttcga aagctgattt atgggacagt gacagaggat aatgaagatg
     2281 aagatggaga ccccgcagaa gagcttggag ggctgtttca tgtcagccag ccagatagag
     2341 ggtgcaagca caaggctgac tctctggact gctccagatt ccctgtggag gctcctcacg
     2401 actgggattt agaggaggtt atgaacagta tcagagactg ctttgtgact gggaaatggg
     2461 aagatgataa agatgcagcc aagatcttag cagaggaaga ggagctctat ggtgactttg
     2521 aagacctaga aacgggggac gtgcacaaag gaaaaccagg cccggatact cagagtgaag
     2581 acatagagga agaagaagtg aaggaagaaa ctgacccaag tgaggaggaa agtgctagga
     2641 aaaagcatct ggataagaag agaaagctga aggagctgtt tgatgcagag tatgatgaag
     2701 gagaaagcac ctactttgat gatcttaagg gggaaatgca gagacaagcg cagcttaacc
     2761 aggctgaatt tgaagatcaa gaagatgaaa ccagagttca gtatgagggg tttcgacctg
     2821 gaatgtatgt tcgaattgag atcgaaaaca tcccttgtga atttgtgcag aactttgacc
     2881 cacactaccc aattattctg ggtggtttgg gcaatagcga gggcactgtg gggtatgtgc
     2941 agatgcgcat caagaaacat cgttggtata agaaaatcct caagtctcga gaccccatta
     3001 ttttttctgt aggatggagg agatttcaga ccatcccatt gtattacatt gaagaccaca
     3061 atggaagaca aaggcttcta aaatacaccc cacaacacat gcattgtgga gcaacttttt
     3121 ggggtcctat cactccacaa ggaactggat ttttggcgat acagtctgtc agtggtgtaa
     3181 tgcctgagtt tcggattgct gccactggag ttgtccttga cctggataaa tccataaaaa
     3241 ttgtgaagaa attaaaacta actggttttc cttttaaaat attcaagaat acttcattta
     3301 ttaagggaat gtttaattct gcattggaag tagccaaatt tgaaggtgct gtcattcgaa
     3361 ctgtcagtgg aataagggga cagatcaaga aagcactccg ggctcccgaa ggagccttcc
     3421 gcgctagctt tgaggacaag ttgctaatga gtgatattgt tttcatgcga acttggtacc
     3481 ctgtctccat tccggccttc tacaatccag taacatcttt gttgaaacca gtgggtgaga
     3541 aggatacctg gtcagggatg cggacaacac atcagctgag gcttgcccat ggaatcaagt
     3601 taaaggcaaa caaggattcc ttgtataagc caatcctgag acaaaagaaa cattttaatt
     3661 cactgcacat tcccaaagcc ttgcagaagg ctctgccatt taagaacaaa cccaagactc
     3721 aagcaaaggc aggcaaagtg ccgagggaca ggcagagacc ggccgtcata cgtgaacctc
     3781 atgagaggaa ggtcctggct ctgctagatg ctctgagcac aatacacagt cagaaaatga
     3841 aaaaggccaa agagcagaga cgcctgcaca acaaggagca tgtgaagatg aagcagaagg
     3901 aggaagagga caagctgagg cggcagaagg acctgaggaa gaagctcttc cggatgcagg
     3961 gtcagaagga aaaacgaagt cagaagtcta gtctgagagg agctgaggat acctgaatgg
     4021 agggggggtc ttccagagct gcagccgtga tggcttcagt gcttgtgaca agtcatgacg
     4081 agagcttgtg gagactctgg gatgtgtggt cccgccgtgc ctggaggaac tgtagaaagc
     4141 ctgctggtgg catccgtgct cattcacggc atccagcaag tcacagttca aggctgggaa
     4201 acttggggct ttgtgaattc actcattggt tcttcctgac ttggtttatt ttgtgctata
     4261 aaaatattaa actattttcc cattaa
//
