LOCUS       NM_153784               1941 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus BICD family like cargo adaptor 2 (Bicdl2), mRNA.
ACCESSION   NM_153784
VERSION     NM_153784.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Schlager,M.A., Kapitein,L.C., Grigoriev,I., Burzynski,G.M.,
            Wulf,P.S., Keijzer,N., de Graaff,E., Fukuda,M., Shepherd,I.T.,
            Akhmanova,A. and Hoogenraad,C.C.
  TITLE     Pericentrosomal targeting of Rab6 secretory vesicles by
            Bicaudal-D-related protein 1 (BICDR-1) regulates neuritogenesis
  JOURNAL   EMBO J 29 (10), 1637-1651 (2010)
   PUBMED   20360680
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK133729.1 and AC154766.2.
            
            On Sep 13, 2016 this sequence version replaced NM_153784.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK133729.1, AK036793.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1898              AK133729.1         1-1898
            1899-1941           AC154766.2         24499-24541         c
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 11.95 cM"
     gene            1..1941
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /note="BICD family like cargo adaptor 2"
                     /db_xref="GeneID:212733"
                     /db_xref="MGI:MGI:2388267"
     exon            1..47
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /inference="alignment:Splign:2.1.0"
     exon            48..342
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /inference="alignment:Splign:2.1.0"
     CDS             61..1584
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /note="coiled-coil domain-containing protein 64B; bicaudal
                     D-related protein 2; BICD-related protein 2; coiled-coil
                     domain containing 64B"
                     /codon_start=1
                     /product="BICD family-like cargo adapter 2"
                     /protein_id="NP_722479.1"
                     /db_xref="CCDS:CCDS28453.1"
                     /db_xref="GeneID:212733"
                     /db_xref="MGI:MGI:2388267"
                     /translation="MDSPGEPSFPSGLLSGGASPSGDEGFFPFVLERRDSFLGGGPGP
                     EEPEDLALQLQQKEKDLLLAAELGKMLLERNEELRRQLETLNTQHLEHEERLQQENHE
                     LRRGLAARGAEWEARAVELEGDVEALRAQLGEQRSERQDSGRERARALGELSEQNLRL
                     SQQLAQASRTEQELQRELDTLRERCQTQALAGAELGARLESLQAENQMLQDRRQDLEA
                     QIRGLREEVDKGQNRLQTTHEELLLLRRERKEHKLELERARFEAGEALRTLRGLQRRV
                     SELEEESRLQDTEISGASLQTELAHSLDSDQDQDQQVNECGGSQAILSPETQETSSPQ
                     PSIQEEILEPPKKRASLSPVEILEEKEAEVARLQDEITLHRTELQTLRDELQRQKELR
                     AQDNPEEALSSALSDRDEAVNKAMKLSLELSRVSLERDSLSRELLRAIRQKVALTQEL
                     EAWQDDMQVVIGQQLRSQRQKELSEAAAAPRRAKTRFSLRLGSGQSGGFLSNLFRRT"
     exon            343..558
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /inference="alignment:Splign:2.1.0"
     exon            559..675
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /inference="alignment:Splign:2.1.0"
     exon            676..822
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /inference="alignment:Splign:2.1.0"
     exon            823..1020
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /inference="alignment:Splign:2.1.0"
     exon            1021..1170
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /inference="alignment:Splign:2.1.0"
     exon            1171..1301
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /inference="alignment:Splign:2.1.0"
     exon            1302..1422
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /inference="alignment:Splign:2.1.0"
     exon            1423..1941
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1883..1888
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /note="hexamer: TATAAA"
     polyA_site      1901
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /note="major polyA site"
     regulatory      1921..1926
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /note="hexamer: AATAAA"
     polyA_site      1941
                     /gene="Bicdl2"
                     /gene_synonym="BICDR-2; Ccdc64b"
                     /note="major polyA site"
ORIGIN      
        1 gaggacttgg ggatcgggga acctcggagg gagcctggtg gcgacagatg tgaaggcacc
       61 atggactccc ctggtgagcc aagcttccct tccgggctgc tctcaggggg tgcttctcct
      121 agtggcgatg aaggattctt tccctttgtg ctggagcgac gagactcctt cctgggagga
      181 gggccagggc cagaagaacc agaggaccta gccctgcaac tgcaacagaa agaaaaggac
      241 ctgttgctgg ctgctgaact tggcaagatg cttctggaac gcaacgagga gcttcggagg
      301 cagctggaga cactgaacac tcagcacttg gagcatgaag aaaggctaca gcaggagaat
      361 catgagctcc gtcgaggact ggctgcccgg ggtgctgagt gggaggccag agctgtggaa
      421 ctggagggag atgtggaagc cctgcgggcc cagcttggcg aacagcggtc agagcggcaa
      481 gacagtggtc gagagcgggc gagggccctt ggtgaactca gcgagcaaaa cctcaggctg
      541 agccagcagc tggcccaggc ctccaggact gagcaggagc ttcagcggga gctggacacc
      601 cttcgggagc ggtgtcagac tcaggccctg gcaggggcag agctgggagc gaggctggag
      661 agtctacagg cagagaacca gatgctgcaa gaccgcaggc aggacctgga ggcccagatc
      721 cgaggccttc gtgaagaagt ggacaaaggg cagaacaggc tacagaccac ccatgaggag
      781 ttgctgctgc ttcgtagaga gagaaaagaa cacaagctag agctggaacg cgcccgcttc
      841 gaggctggag aggcgctgag aacgctgagg gggctgcagc ggcgggtgtc agagctggag
      901 gaggagtcgc gactccaaga caccgagata tcgggcgcct ccctgcagac cgagctcgcc
      961 cacagccttg acagtgacca agaccaagac cagcaagtca atgaatgtgg aggctctcag
     1021 gccatattgt cccctgagac tcaagagaca tccagtcccc agccttcaat acaggaagag
     1081 atcttggagc cacctaagaa acgagcatcc ctgagcccag tggaaatact ggaggagaag
     1141 gaggcagaag tggccaggct gcaggatgag atcacgctac accgtacaga gctacagacg
     1201 ctgcgggatg agctgcagag acaaaaggag ctgagagcgc aggacaatcc agaggaagcc
     1261 ctgagcagtg cgctctctga ccgggacgaa gcagtgaaca aggccatgaa gctgtcactg
     1321 gagctcagtc gtgtctccct agagcgggac tctctgtccc gggagctgct gcgcgccatc
     1381 cgccagaagg tggcactgac gcaggagctc gaggcttggc aggacgacat gcaggtagtg
     1441 attggacagc agctgcgctc ccagcgccag aaagagctca gtgaggctgc agccgcccca
     1501 agacgtgcga agacccgctt ttcactgcgc ctgggatccg ggcagagtgg aggctttctg
     1561 agcaacctct tccgaaggac ctgagggttg ggggccaggg ctaccttttc tcactctgga
     1621 gctcaatttc ctaacagcca atggagccgt ggggtctaaa atgacttcca agggaagtct
     1681 tccatgcccc aagaggtgga cagaggcact ttgggtgcag gggccagctt tggggcaggt
     1741 gccccaggtg ggtggcgggg gcagagctgt ttattttttg aatctaaata gatctatctt
     1801 ttctaagcgc caggtcctgc cccatctgtg cgagaggggt ggggatgggt atttatgtgt
     1861 aaggataagt cagagctata tatataaatc actatactta attggtctcc atttttgggg
     1921 aataaaatgc aaacaagaaa a
//
